RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 MCM2P49736 904 aa25.47■■□□□ 1.67
ABCF3-202ENST00000421340 C16orf86Q6ZW13 317 aa25.47■■□□□ 1.67
ABCF3-202ENST00000421340 METTL16Q86W50 562 aaKnown RBP25.47■■□□□ 1.67
ABCF3-202ENST00000421340 UPF3BQ9BZI7 483 aaKnown RBP25.47■■□□□ 1.67
ABCF3-202ENST00000421340 PDRG1Q9NUG6 133 aa25.47■■□□□ 1.67
ABCF3-202ENST00000421340 SWAP70Q9UH65 585 aa25.47■■□□□ 1.67
ABCF3-202ENST00000421340 DDX60LQ5H9U9 1706 aaKnown RBP25.46■■□□□ 1.67
ABCF3-202ENST00000421340 IQCA1LA6NCM1 817 aa25.46■■□□□ 1.67
ABCF3-202ENST00000421340 TCP10L2B9ZVM9 353 aa25.46■■□□□ 1.67
ABCF3-202ENST00000421340 GABPAQ06546 454 aa25.46■■□□□ 1.67
ABCF3-202ENST00000421340 TCP10Q12799 353 aa25.46■■□□□ 1.67
ABCF3-202ENST00000421340 USP50Q70EL3 339 aaPredicted RBP25.46■■□□□ 1.67
ABCF3-202ENST00000421340 TRPM4Q8TD43 1214 aa25.46■■□□□ 1.67
ABCF3-202ENST00000421340 ESR2Q92731 530 aa25.46■■□□□ 1.67
ABCF3-202ENST00000421340 VEZTQ9HBM0 779 aa25.46■■□□□ 1.67
ABCF3-202ENST00000421340 CNTNAP1P78357 1384 aa25.45■■□□□ 1.67
ABCF3-202ENST00000421340 CDK5RAP2Q96SN8 1893 aa25.45■■□□□ 1.67
ABCF3-202ENST00000421340 ECM29Q5VYK3 1845 aa25.45■■□□□ 1.66
ABCF3-202ENST00000421340 HIRAP54198 1017 aaPredicted RBP25.45■■□□□ 1.66
ABCF3-202ENST00000421340 SH3BP5LQ7L8J4 393 aa25.45■■□□□ 1.66
ABCF3-202ENST00000421340 APOBEC3FQ8IUX4 373 aaKnown RBP25.45■■□□□ 1.66
ABCF3-202ENST00000421340 SERPINB13Q9UIV8 391 aa25.45■■□□□ 1.66
ABCF3-202ENST00000421340 NAV1Q8NEY1 1877 aa25.45■■□□□ 1.66
ABCF3-202ENST00000421340 SRCAPQ6ZRS2 3230 aa25.44■■□□□ 1.66
ABCF3-202ENST00000421340 NEDD4P46934 1319 aa25.44■■□□□ 1.66
ABCF3-202ENST00000421340 PITPNM2Q9BZ72 1349 aa25.44■■□□□ 1.66
ABCF3-202ENST00000421340 DDTLA6NHG4 134 aaPredicted RBP25.44■■□□□ 1.66
ABCF3-202ENST00000421340 SMIM22K7EJ46 135 aa25.44■■□□□ 1.66
ABCF3-202ENST00000421340 ANKRD1Q15327 319 aa25.44■■□□□ 1.66
ABCF3-202ENST00000421340 INCENPQ9NQS7 918 aa25.44■■□□□ 1.66
ABCF3-202ENST00000421340 CDK8P49336 464 aa25.43■■□□□ 1.66
ABCF3-202ENST00000421340 EVX2Q03828 476 aa25.43■■□□□ 1.66
ABCF3-202ENST00000421340 ZSCAN29Q8IWY8 852 aaPredicted RBP25.43■■□□□ 1.66
ABCF3-202ENST00000421340 ZC3H15Q8WU90 426 aaKnown RBP25.43■■□□□ 1.66
ABCF3-202ENST00000421340 DYNLL2Q96FJ2 89 aa25.43■■□□□ 1.66
ABCF3-202ENST00000421340 MKNK2Q9HBH9 465 aa25.43■■□□□ 1.66
ABCF3-202ENST00000421340 ZSWIM5Q9P217 1185 aa25.43■■□□□ 1.66
ABCF3-202ENST00000421340 PGAP2Q9UHJ9 254 aa25.43■■□□□ 1.66
ABCF3-202ENST00000421340 B4E1Z4 1266 aa25.42■■□□□ 1.66
ABCF3-202ENST00000421340 CPA1P15085 419 aa25.42■■□□□ 1.66
ABCF3-202ENST00000421340 EPHX2P34913 555 aa25.42■■□□□ 1.66
ABCF3-202ENST00000421340 BECN1Q14457 450 aa25.42■■□□□ 1.66
ABCF3-202ENST00000421340 TMEM87BQ96K49 555 aa25.42■■□□□ 1.66
ABCF3-202ENST00000421340 AGXT2Q9BYV1 514 aa25.42■■□□□ 1.66
ABCF3-202ENST00000421340 PPP2R3BQ9Y5P8 575 aa25.42■■□□□ 1.66
ABCF3-202ENST00000421340 BAZ2AQ9UIF9 1905 aaKnown RBP25.41■■□□□ 1.66
ABCF3-202ENST00000421340 PRC1O43663 620 aa25.41■■□□□ 1.66
ABCF3-202ENST00000421340 TBC1D12O60347 775 aa25.41■■□□□ 1.66
ABCF3-202ENST00000421340 KDM4AO75164 1064 aa25.41■■□□□ 1.66
ABCF3-202ENST00000421340 COL9A3Q14050 684 aaPredicted RBP25.41■■□□□ 1.66
ABCF3-202ENST00000421340 RASA3Q14644 834 aa25.41■■□□□ 1.66
ABCF3-202ENST00000421340 ANGEL2Q5VTE6 544 aaKnown RBP25.41■■□□□ 1.66
ABCF3-202ENST00000421340 ZNF444Q8N0Y2 327 aaPredicted RBP25.41■■□□□ 1.66
ABCF3-202ENST00000421340 TOMM22Q9NS69 142 aa25.41■■□□□ 1.66
ABCF3-202ENST00000421340 HERC5Q9UII4 1024 aaKnown RBP25.41■■□□□ 1.66
ABCF3-202ENST00000421340 POTECB2RU33 542 aa25.4■■□□□ 1.66
ABCF3-202ENST00000421340 ANTXR2P58335 489 aa25.4■■□□□ 1.66
ABCF3-202ENST00000421340 MAP3K10Q02779 954 aa25.4■■□□□ 1.66
ABCF3-202ENST00000421340 SLC4A8Q2Y0W8 1093 aa25.4■■□□□ 1.66
ABCF3-202ENST00000421340 RRP12Q5JTH9 1297 aaKnown RBP25.4■■□□□ 1.66
ABCF3-202ENST00000421340 CYB5R4Q7L1T6 521 aa25.4■■□□□ 1.66
ABCF3-202ENST00000421340 PNMA8AQ86V59 439 aaPredicted RBP25.4■■□□□ 1.66
ABCF3-202ENST00000421340 CSRNP1Q96S65 589 aa25.4■■□□□ 1.66
ABCF3-202ENST00000421340 LAMB1P07942 1786 aa25.4■■□□□ 1.66
ABCF3-202ENST00000421340 RASA1P20936 1047 aa25.39■■□□□ 1.66
ABCF3-202ENST00000421340 AK2P54819 239 aa25.39■■□□□ 1.66
ABCF3-202ENST00000421340 CCDC178Q5BJE1 867 aa25.39■■□□□ 1.66
ABCF3-202ENST00000421340 HSCBQ8IWL3 235 aa25.39■■□□□ 1.66
ABCF3-202ENST00000421340 STK11IPQ8N1F8 1099 aa25.39■■□□□ 1.66
ABCF3-202ENST00000421340 DEFB129Q9H1M3 183 aa25.39■■□□□ 1.66
ABCF3-202ENST00000421340 TAF1DQ9H5J8 278 aaPredicted RBP25.39■■□□□ 1.66
ABCF3-202ENST00000421340 TCP11L1Q9NUJ3 509 aa25.39■■□□□ 1.66
ABCF3-202ENST00000421340 WDR90Q96KV7 1748 aa25.39■■□□□ 1.65
ABCF3-202ENST00000421340 ASTN2O75129 1339 aaPredicted RBP25.38■■□□□ 1.65
ABCF3-202ENST00000421340 MYH1P12882 1939 aa25.38■■□□□ 1.65
ABCF3-202ENST00000421340 RANBP6O60518 1105 aaKnown RBP25.38■■□□□ 1.65
ABCF3-202ENST00000421340 PRDM1O75626 825 aa25.38■■□□□ 1.65
ABCF3-202ENST00000421340 SART3Q15020 963 aaKnown RBP25.38■■□□□ 1.65
ABCF3-202ENST00000421340 TATDN1Q6P1N9 297 aa25.38■■□□□ 1.65
ABCF3-202ENST00000421340 Q6ZUG5 572 aa25.38■■□□□ 1.65
ABCF3-202ENST00000421340 CRACR2BQ8N4Y2 399 aaPredicted RBP25.38■■□□□ 1.65
ABCF3-202ENST00000421340 HOOK2Q96ED9 719 aa25.38■■□□□ 1.65
ABCF3-202ENST00000421340 CCDC17Q96LX7 622 aa25.38■■□□□ 1.65
ABCF3-202ENST00000421340 TEPSINQ96N21 525 aa25.38■■□□□ 1.65
ABCF3-202ENST00000421340 TBC1D2Q9BYX2 928 aa25.38■■□□□ 1.65
ABCF3-202ENST00000421340 TMEM39BQ9GZU3 492 aa25.38■■□□□ 1.65
ABCF3-202ENST00000421340 CD2BP2O95400 341 aaKnown RBP25.37■■□□□ 1.65
ABCF3-202ENST00000421340 TOB2Q14106 344 aaPredicted RBP25.37■■□□□ 1.65
ABCF3-202ENST00000421340 IQCA1Q86XH1 822 aa25.37■■□□□ 1.65
ABCF3-202ENST00000421340 TMTC2Q8N394 836 aa25.37■■□□□ 1.65
ABCF3-202ENST00000421340 NKX2-3Q8TAU0 364 aa25.37■■□□□ 1.65
ABCF3-202ENST00000421340 IGDCC4Q8TDY8 1250 aa25.37■■□□□ 1.65
ABCF3-202ENST00000421340 TRIM34Q9BYJ4 488 aa25.37■■□□□ 1.65
ABCF3-202ENST00000421340 GGA3Q9NZ52 723 aa25.37■■□□□ 1.65
ABCF3-202ENST00000421340 LIMCH1Q9UPQ0 1083 aa25.37■■□□□ 1.65
ABCF3-202ENST00000421340 SCN4AP35499 1836 aa25.36■■□□□ 1.65
ABCF3-202ENST00000421340 SHMT1P34896 483 aa25.36■■□□□ 1.65
ABCF3-202ENST00000421340 LIFRP42702 1097 aa25.36■■□□□ 1.65
ABCF3-202ENST00000421340 EVCP57679 992 aa25.36■■□□□ 1.65
ABCF3-202ENST00000421340 SLC44A5Q8NCS7 719 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms