RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 CPA4Q9UI42 421 aa26.04■■□□□ 1.76
PTPN4-202ENST00000420482 SLC45A1Q9Y2W3 748 aa26.04■■□□□ 1.76
PTPN4-202ENST00000420482 MOGSQ13724 837 aa26.03■■□□□ 1.76
PTPN4-202ENST00000420482 AACSQ86V21 672 aa26.03■■□□□ 1.76
PTPN4-202ENST00000420482 TLR7Q9NYK1 1049 aaKnown RBP26.03■■□□□ 1.76
PTPN4-202ENST00000420482 MKI67P46013 3256 aaKnown RBP26.03■■□□□ 1.76
PTPN4-202ENST00000420482 RCAN3Q9UKA8 241 aa26.02■■□□□ 1.76
PTPN4-202ENST00000420482 PTCH2Q9Y6C5 1203 aa26.02■■□□□ 1.76
PTPN4-202ENST00000420482 TRIM75PA6NK02 468 aa26.01■■□□□ 1.75
PTPN4-202ENST00000420482 IDH1O75874 414 aaKnown RBP26.01■■□□□ 1.75
PTPN4-202ENST00000420482 MAP3K12Q12852 859 aa26.01■■□□□ 1.75
PTPN4-202ENST00000420482 GPAT2Q6NUI2 795 aa26.01■■□□□ 1.75
PTPN4-202ENST00000420482 CLASRPQ8N2M8 674 aaKnown RBP26.01■■□□□ 1.75
PTPN4-202ENST00000420482 FMNL1O95466 1100 aaPredicted RBP26■■□□□ 1.75
PTPN4-202ENST00000420482 CYP7A1P22680 504 aa26■■□□□ 1.75
PTPN4-202ENST00000420482 PSMC4P43686 418 aa26■■□□□ 1.75
PTPN4-202ENST00000420482 CRACR2BQ8N4Y2 399 aaPredicted RBP26■■□□□ 1.75
PTPN4-202ENST00000420482 TGFBRAP1Q8WUH2 860 aa26■■□□□ 1.75
PTPN4-202ENST00000420482 KIF1BPQ96EK5 621 aa26■■□□□ 1.75
PTPN4-202ENST00000420482 ARHGAP39Q9C0H5 1083 aa26■■□□□ 1.75
PTPN4-202ENST00000420482 AS3MTQ9HBK9 375 aa26■■□□□ 1.75
PTPN4-202ENST00000420482 PIH1D3Q9NQM4 214 aaKnown RBP26■■□□□ 1.75
PTPN4-202ENST00000420482 BRCA2P51587 3418 aa26■■□□□ 1.75
PTPN4-202ENST00000420482 ADGRA2Q96PE1 1338 aa25.99■■□□□ 1.75
PTPN4-202ENST00000420482 HLA-DOAP06340 250 aa25.99■■□□□ 1.75
PTPN4-202ENST00000420482 CAP2P40123 477 aa25.99■■□□□ 1.75
PTPN4-202ENST00000420482 TTF1Q15361 905 aaPredicted RBP25.99■■□□□ 1.75
PTPN4-202ENST00000420482 RHPN1Q8TCX5 695 aa25.99■■□□□ 1.75
PTPN4-202ENST00000420482 SMCR8Q8TEV9 937 aaPredicted RBP25.99■■□□□ 1.75
PTPN4-202ENST00000420482 GCC1Q96CN9 775 aa25.99■■□□□ 1.75
PTPN4-202ENST00000420482 ZNF333Q96JL9 665 aa25.99■■□□□ 1.75
PTPN4-202ENST00000420482 PNMA3Q9UL41 463 aa25.99■■□□□ 1.75
PTPN4-202ENST00000420482 COG6Q9Y2V7 657 aa25.99■■□□□ 1.75
PTPN4-202ENST00000420482 FLT1P17948 1338 aa25.98■■□□□ 1.75
PTPN4-202ENST00000420482 FAM196BA6NMK8 535 aa25.98■■□□□ 1.75
PTPN4-202ENST00000420482 SLURP2P0DP57 97 aa25.98■■□□□ 1.75
PTPN4-202ENST00000420482 CYP2C8P10632 490 aa25.98■■□□□ 1.75
PTPN4-202ENST00000420482 PABPC4Q13310 644 aaKnown RBP eCLIP25.98■■□□□ 1.75
PTPN4-202ENST00000420482 FOXP4Q8IVH2 680 aaPredicted RBP25.98■■□□□ 1.75
PTPN4-202ENST00000420482 MAPKAPK5Q8IW41 473 aa25.98■■□□□ 1.75
PTPN4-202ENST00000420482 USP17L5A8MUK1 530 aa25.97■■□□□ 1.75
PTPN4-202ENST00000420482 FCGRTP55899 365 aa25.97■■□□□ 1.75
PTPN4-202ENST00000420482 SLC4A8Q2Y0W8 1093 aa25.97■■□□□ 1.75
PTPN4-202ENST00000420482 ADGRA1Q86SQ6 560 aa25.97■■□□□ 1.75
PTPN4-202ENST00000420482 PROCA1Q8NCQ7 364 aaPredicted RBP25.97■■□□□ 1.75
PTPN4-202ENST00000420482 ZNF280CQ8ND82 737 aa25.97■■□□□ 1.75
PTPN4-202ENST00000420482 IL1RAPL2Q9NP60 686 aa25.97■■□□□ 1.75
PTPN4-202ENST00000420482 ZBTB40Q9NUA8 1239 aa25.97■■□□□ 1.75
PTPN4-202ENST00000420482 SRRDQ9UH36 339 aa25.97■■□□□ 1.75
PTPN4-202ENST00000420482 AGTPBP1Q9UPW5 1226 aa25.97■■□□□ 1.75
PTPN4-202ENST00000420482 RAB11FIP3O75154 756 aa25.96■■□□□ 1.75
PTPN4-202ENST00000420482 ASNSP08243 561 aa25.96■■□□□ 1.75
PTPN4-202ENST00000420482 IFIT2P09913 472 aaKnown RBP25.96■■□□□ 1.75
PTPN4-202ENST00000420482 MAGEB6Q8N7X4 407 aa25.96■■□□□ 1.75
PTPN4-202ENST00000420482 RAET1EQ8TD07 263 aa25.96■■□□□ 1.75
PTPN4-202ENST00000420482 GINM1Q9NU53 330 aa25.96■■□□□ 1.75
PTPN4-202ENST00000420482 BCRP11274 1271 aa25.95■■□□□ 1.74
PTPN4-202ENST00000420482 EN2P19622 333 aaPredicted RBP25.95■■□□□ 1.74
PTPN4-202ENST00000420482 USP5P45974 858 aa25.95■■□□□ 1.74
PTPN4-202ENST00000420482 SPP2Q13103 211 aa25.95■■□□□ 1.74
PTPN4-202ENST00000420482 TRIM47Q96LD4 638 aa25.95■■□□□ 1.74
PTPN4-202ENST00000420482 PHIPQ8WWQ0 1821 aa25.94■■□□□ 1.74
PTPN4-202ENST00000420482 ECM2O94769 699 aaPredicted RBP25.94■■□□□ 1.74
PTPN4-202ENST00000420482 MGAMO43451 1857 aa25.94■■□□□ 1.74
PTPN4-202ENST00000420482 FOCADQ5VW36 1801 aa25.93■■□□□ 1.74
PTPN4-202ENST00000420482 ATAD5Q96QE3 1844 aa25.93■■□□□ 1.74
PTPN4-202ENST00000420482 MYPNQ86TC9 1320 aa25.93■■□□□ 1.74
PTPN4-202ENST00000420482 PTPRFP10586 1907 aa25.93■■□□□ 1.74
PTPN4-202ENST00000420482 APBB1O00213 710 aa25.93■■□□□ 1.74
PTPN4-202ENST00000420482 OSBPP22059 807 aa25.93■■□□□ 1.74
PTPN4-202ENST00000420482 PDE3AQ14432 1141 aa25.93■■□□□ 1.74
PTPN4-202ENST00000420482 CCDC84Q86UT8 332 aaPredicted RBP25.93■■□□□ 1.74
PTPN4-202ENST00000420482 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.93■■□□□ 1.74
PTPN4-202ENST00000420482 PALD1Q9ULE6 856 aa25.93■■□□□ 1.74
PTPN4-202ENST00000420482 DYNLL1P63167 89 aaKnown RBP25.92■■□□□ 1.74
PTPN4-202ENST00000420482 METTL16Q86W50 562 aaKnown RBP25.92■■□□□ 1.74
PTPN4-202ENST00000420482 MIGA1Q8NAN2 632 aa25.92■■□□□ 1.74
PTPN4-202ENST00000420482 SH3TC2Q8TF17 1288 aa25.92■■□□□ 1.74
PTPN4-202ENST00000420482 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.92■■□□□ 1.74
PTPN4-202ENST00000420482 MYO5AQ9Y4I1 1855 aaKnown RBP25.91■■□□□ 1.74
PTPN4-202ENST00000420482 SAP30BPQ9UHR5 308 aaKnown RBP25.91■■□□□ 1.74
PTPN4-202ENST00000420482 GRK4P32298 578 aa25.9■■□□□ 1.74
PTPN4-202ENST00000420482 HMGCS2P54868 508 aa25.9■■□□□ 1.74
PTPN4-202ENST00000420482 TTC6Q86TZ1 520 aa25.9■■□□□ 1.74
PTPN4-202ENST00000420482 WDR18Q9BV38 432 aa25.9■■□□□ 1.74
PTPN4-202ENST00000420482 ANTXR1Q9H6X2 564 aa25.9■■□□□ 1.74
PTPN4-202ENST00000420482 TMOD4Q9NZQ9 345 aa25.9■■□□□ 1.74
PTPN4-202ENST00000420482 NDUFB9Q9Y6M9 179 aa25.9■■□□□ 1.74
PTPN4-202ENST00000420482 CDK5RAP2Q96SN8 1893 aa25.89■■□□□ 1.74
PTPN4-202ENST00000420482 CTGFP29279 349 aa25.89■■□□□ 1.74
PTPN4-202ENST00000420482 GCLCP48506 637 aaPredicted RBP25.89■■□□□ 1.74
PTPN4-202ENST00000420482 SH3D19Q5HYK7 790 aa25.89■■□□□ 1.74
PTPN4-202ENST00000420482 BIN2Q9UBW5 565 aaPredicted RBP25.89■■□□□ 1.74
PTPN4-202ENST00000420482 TNPO2O14787 897 aaKnown RBP25.88■■□□□ 1.73
PTPN4-202ENST00000420482 MYCP01106 439 aaPredicted RBP25.88■■□□□ 1.73
PTPN4-202ENST00000420482 UBXN2AP68543 259 aa25.88■■□□□ 1.73
PTPN4-202ENST00000420482 FAM110CQ1W6H9 321 aa25.88■■□□□ 1.73
PTPN4-202ENST00000420482 TREML2Q5T2D2 321 aa25.88■■□□□ 1.73
PTPN4-202ENST00000420482 SIRT2Q8IXJ6 389 aa25.88■■□□□ 1.73
PTPN4-202ENST00000420482 BCL11AQ9H165 835 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms