RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 PNMA3Q9UL41 463 aa4.83□□□□□ -1.64
PTPN22-202ENST00000420377 SYNGAP1Q96PV0 1343 aa4.83□□□□□ -1.64
PTPN22-202ENST00000420377 HTATSF1O43719 755 aaKnown RBP4.82□□□□□ -1.64
PTPN22-202ENST00000420377 U2AF1L5P0DN76 240 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-202ENST00000420377 C7P10643 843 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 STIP1P31948 543 aaKnown RBP4.82□□□□□ -1.64
PTPN22-202ENST00000420377 U2AF1Q01081 240 aaKnown RBP eCLIP4.82□□□□□ -1.64
PTPN22-202ENST00000420377 E2F5Q15329 346 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 CCDC178Q5BJE1 867 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 PPP2R2DQ66LE6 453 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 FBXO46Q6PJ61 603 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-202ENST00000420377 TAOK3Q9H2K8 898 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 TMOD4Q9NZQ9 345 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 LHX6Q9UPM6 363 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 CARMIL3Q8ND23 1372 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 SHTN1A0MZ66 631 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 NPR1P16066 1061 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 VCAM1P19320 739 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 RPS12P25398 132 aaKnown RBP4.82□□□□□ -1.64
PTPN22-202ENST00000420377 CTDSPL2Q05D32 466 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 TBC1D25Q3MII6 688 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 PLEKHO1Q53GL0 409 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-202ENST00000420377 CCDC70Q6NSX1 233 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 KCNV1Q6PIU1 500 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 C11orf96Q7Z7L8 435 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 RPUSD2Q8IZ73 545 aaKnown RBP4.82□□□□□ -1.64
PTPN22-202ENST00000420377 C1orf131Q8NDD1 294 aaKnown RBP4.82□□□□□ -1.64
PTPN22-202ENST00000420377 C7orf43Q8WVR3 580 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 PIGBQ92521 554 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 ANKRD7Q92527 254 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 CAPNS2Q96L46 248 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 EYA1Q99502 592 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 TOMM22Q9NS69 142 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 CPSF2Q9P2I0 782 aaKnown RBP4.82□□□□□ -1.64
PTPN22-202ENST00000420377 IQSEC3Q9UPP2 1182 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-202ENST00000420377 ANKRD31Q8N7Z5 1873 aa4.82□□□□□ -1.64
PTPN22-202ENST00000420377 U2SURPO15042 1029 aaKnown RBP4.81□□□□□ -1.64
PTPN22-202ENST00000420377 GPR37L1O60883 481 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 PHKG2P15735 406 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 TMEM259Q4ZIN3 620 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 TTLL5Q6EMB2 1281 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 LRRN4Q8WUT4 740 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 FAXDC2Q96IV6 333 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 RTFDC1Q9BY42 306 aaPredicted RBP4.81□□□□□ -1.64
PTPN22-202ENST00000420377 ATG3Q9NT62 314 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 NFKBIEO00221 500 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 CYP2C19P33261 490 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 EPHX2P34913 555 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 RPS6KA3P51812 740 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 NOLC1Q14978 699 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTPN22-202ENST00000420377 RABEP1Q15276 862 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 SYCP1Q15431 976 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 TTC30AQ86WT1 665 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 HSCBQ8IWL3 235 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 MYOCDQ8IZQ8 938 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 VPS37AQ8NEZ2 397 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 ADARB2Q9NS39 739 aaKnown RBP4.81□□□□□ -1.64
PTPN22-202ENST00000420377 KLHL42Q9P2K6 505 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 ODF2LQ9ULJ1 636 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 SPTLC1O15269 473 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 LILRB3O75022 631 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 HOXA10P31260 410 aaPredicted RBP4.81□□□□□ -1.64
PTPN22-202ENST00000420377 BMP8BP34820 402 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 HNRNPH2P55795 449 aaKnown RBP4.81□□□□□ -1.64
PTPN22-202ENST00000420377 SESN3P58005 492 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 NFXL1Q6ZNB6 911 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 DPF2Q92785 391 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 SYMPKQ92797 1274 aaKnown RBP4.81□□□□□ -1.64
PTPN22-202ENST00000420377 CCDC47Q96A33 483 aaKnown RBP4.81□□□□□ -1.64
PTPN22-202ENST00000420377 ARMC5Q96C12 935 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 PLEKHG4BQ96PX9 1271 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 TRIM7Q9C029 511 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 TMEM134Q9H6X4 195 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 PCDHGC3Q9UN70 934 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 RABL2BQ9UNT1 228 aa4.81□□□□□ -1.64
PTPN22-202ENST00000420377 CCDC88AQ3V6T2 1871 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 MYO1CO00159 1063 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 PARNO95453 639 aaKnown RBP4.8□□□□□ -1.64
PTPN22-202ENST00000420377 LMOD1P29536 600 aaPredicted RBP4.8□□□□□ -1.64
PTPN22-202ENST00000420377 TM4SF4P48230 202 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 DIXDC1Q155Q3 683 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 LEKR1Q6ZMV7 388 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 MYLK4Q86YV6 388 aaPredicted RBP4.8□□□□□ -1.64
PTPN22-202ENST00000420377 CNTROBQ8N137 903 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 HDAC7Q8WUI4 952 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 STAG1Q8WVM7 1258 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 SCYL1Q96KG9 808 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 CRACR2AQ9BSW2 395 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 TMX1Q9H3N1 280 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 SEPT9Q9UHD8 586 aaPredicted RBP4.8□□□□□ -1.64
PTPN22-202ENST00000420377 DDX41Q9UJV9 622 aaKnown RBP4.8□□□□□ -1.64
PTPN22-202ENST00000420377 RGPD2P0DJD1 1756 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 CEMIPQ8WUJ3 1361 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 LRRC37AA6NMS7 1700 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 A0A0G2JLW4 131 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 SLC27A2O14975 620 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 RNF40O75150 1001 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 ZPR1O75312 459 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 BAG4O95429 457 aaKnown RBP4.8□□□□□ -1.64
PTPN22-202ENST00000420377 HOXB3P14651 431 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms