RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ARHGAP29Q52LW3 1261 aa13.65□□□□□ -0.22
LIMK1-202ENST00000418310 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
LIMK1-202ENST00000418310 RESP18Q5W5W9 173 aa13.65□□□□□ -0.22
LIMK1-202ENST00000418310 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
LIMK1-202ENST00000418310 OGFRQ9NZT2 677 aa13.65□□□□□ -0.22
LIMK1-202ENST00000418310 IMPACTQ9P2X3 320 aa13.65□□□□□ -0.22
LIMK1-202ENST00000418310 ERICH4A6NGS2 130 aa13.65□□□□□ -0.22
LIMK1-202ENST00000418310 FBXL16Q8N461 479 aa13.65□□□□□ -0.22
LIMK1-202ENST00000418310 ZNF397Q8NF99 534 aaPredicted RBP13.65□□□□□ -0.22
LIMK1-202ENST00000418310 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
LIMK1-202ENST00000418310 HPSEQ9Y251 543 aa13.65□□□□□ -0.22
LIMK1-202ENST00000418310 UQCRFS1P1P0C7P4 283 aa13.65□□□□□ -0.23
LIMK1-202ENST00000418310 ADGRA1Q86SQ6 560 aa13.65□□□□□ -0.23
LIMK1-202ENST00000418310 MNS1Q8NEH6 495 aa13.65□□□□□ -0.23
LIMK1-202ENST00000418310 CARD6Q9BX69 1037 aa13.65□□□□□ -0.23
LIMK1-202ENST00000418310 TEX13AQ9BXU3 409 aaPredicted RBP13.65□□□□□ -0.23
LIMK1-202ENST00000418310 FBXO3Q9UK99 471 aa13.65□□□□□ -0.23
LIMK1-202ENST00000418310 SART3Q15020 963 aaKnown RBP13.64□□□□□ -0.23
LIMK1-202ENST00000418310 POSTNQ15063 836 aa13.64□□□□□ -0.23
LIMK1-202ENST00000418310 MAN1B1Q9UKM7 699 aa13.64□□□□□ -0.23
LIMK1-202ENST00000418310 ABCC6O95255 1503 aa13.64□□□□□ -0.23
LIMK1-202ENST00000418310 MYH15Q9Y2K3 1946 aa13.64□□□□□ -0.23
LIMK1-202ENST00000418310 ADAMTSL3P82987 1691 aa13.64□□□□□ -0.23
LIMK1-202ENST00000418310 CUTAO60888 179 aa13.64□□□□□ -0.23
LIMK1-202ENST00000418310 PPP6R2O75170 966 aa13.64□□□□□ -0.23
LIMK1-202ENST00000418310 DYNLL1P63167 89 aaKnown RBP13.64□□□□□ -0.23
LIMK1-202ENST00000418310 AKAP17AQ02040 695 aaKnown RBP13.64□□□□□ -0.23
LIMK1-202ENST00000418310 EPSTI1Q96J88 318 aa13.64□□□□□ -0.23
LIMK1-202ENST00000418310 CSRNP2Q9H175 543 aa13.64□□□□□ -0.23
LIMK1-202ENST00000418310 INTS13Q9NVM9 706 aa13.64□□□□□ -0.23
LIMK1-202ENST00000418310 TUBE1Q9UJT0 475 aa13.64□□□□□ -0.23
LIMK1-202ENST00000418310 DDX41Q9UJV9 622 aaKnown RBP13.64□□□□□ -0.23
LIMK1-202ENST00000418310 MMP1P03956 469 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 ZNF654Q8IZM8 581 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 NACAP1Q9BZK3 213 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 NIP7Q9Y221 180 aaKnown RBP eCLIP13.63□□□□□ -0.23
LIMK1-202ENST00000418310 LAMB4A4D0S4 1761 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 LMTK3Q96Q04 1460 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 FANCGO15287 622 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 GNG11P61952 73 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 MTF1Q14872 753 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 EARS2Q5JPH6 523 aaKnown RBP13.63□□□□□ -0.23
LIMK1-202ENST00000418310 SMARCE1Q969G3 411 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 IRX2Q9BZI1 471 aaPredicted RBP13.63□□□□□ -0.23
LIMK1-202ENST00000418310 PKD1L3Q7Z443 1732 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 SEC31AO94979 1220 aaKnown RBP13.63□□□□□ -0.23
LIMK1-202ENST00000418310 ADAMTS2O95450 1211 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 FMNL1O95466 1100 aaPredicted RBP13.63□□□□□ -0.23
LIMK1-202ENST00000418310 ARID4AP29374 1257 aaPredicted RBP13.63□□□□□ -0.23
LIMK1-202ENST00000418310 FEZ1Q99689 392 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 BPIFA3Q9BQP9 254 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 NUP188Q5SRE5 1749 aa13.63□□□□□ -0.23
LIMK1-202ENST00000418310 WNT7AO00755 349 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 ZNF174Q15697 407 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 TOGARAM2Q6ZUX3 1019 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.62□□□□□ -0.23
LIMK1-202ENST00000418310 TNKSO95271 1327 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 EXOC5O00471 708 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 IKBKBO14920 756 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 CBFA2T2O43439 604 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 PLEKHA8P1O95397 391 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 ATP6V1AP38606 617 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 IGHMBP2P38935 993 aaKnown RBP13.62□□□□□ -0.23
LIMK1-202ENST00000418310 ETF1P62495 437 aaKnown RBP13.62□□□□□ -0.23
LIMK1-202ENST00000418310 UBXN4Q92575 508 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
LIMK1-202ENST00000418310 CDHR2Q9BYE9 1310 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 NMT2O60551 498 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 TEX35Q5T0J7 233 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 VSTM4Q8IW00 320 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 FANCBQ8NB91 859 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 LZTFL1Q9NQ48 299 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 ZNF446Q9NWS9 450 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 MAPK8IP1Q9UQF2 711 aa13.62□□□□□ -0.23
LIMK1-202ENST00000418310 STRCP1A6NGW2 1772 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 A0A0U1RQJ8 604 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 IFNAR1P17181 557 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 PPARAQ07869 468 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 SGMS1Q86VZ5 419 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 ATRIPQ8WXE1 791 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 WDR24Q96S15 920 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 KRT23Q9C075 422 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 BLZF1Q9H2G9 400 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 FBXO2Q9UK22 296 aaPredicted RBP13.61□□□□□ -0.23
LIMK1-202ENST00000418310 TNS2Q63HR2 1409 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 CDC25AP30304 524 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 CHRNDQ07001 517 aa13.61□□□□□ -0.23
LIMK1-202ENST00000418310 BAG1Q99933 345 aaPredicted RBP13.61□□□□□ -0.23
LIMK1-202ENST00000418310 A0A0U1RQG5 324 aaPredicted RBP13.6□□□□□ -0.23
LIMK1-202ENST00000418310 POLR3GO15318 223 aaPredicted RBP13.6□□□□□ -0.23
LIMK1-202ENST00000418310 TEX33O43247 280 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 FGFR2P21802 821 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 KRT222Q8N1A0 295 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 CRACR2BQ8N4Y2 399 aaPredicted RBP13.6□□□□□ -0.23
LIMK1-202ENST00000418310 TIGD1Q96MW7 591 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 A0A087X0B3 334 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 CCT6AP40227 531 aaKnown RBP13.6□□□□□ -0.23
LIMK1-202ENST00000418310 LIFRP42702 1097 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 CLCN6P51797 869 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 FAM47AQ5JRC9 791 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms