RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 ID3Q02535 119 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 GRIK4Q16099 956 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 TMEM201Q5SNT2 666 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 ACAD11Q709F0 780 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 UBE3DQ7Z6J8 389 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 OR6P1Q8NGX9 317 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 TMEM40Q8WWA1 233 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 ACSF2Q96CM8 615 aaPredicted RBP7.69□□□□□ -1.18
RFC4-204ENST00000417876 ATG4CQ96DT6 458 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 FANCD2OSQ96PS1 177 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 WNT10AQ9GZT5 417 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 ST7Q9NRC1 585 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 SIRPGQ9P1W8 387 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 CNTNAP5Q8WYK1 1306 aa7.69□□□□□ -1.18
RFC4-204ENST00000417876 LOC100996750A0A140TA64 210 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 A0A1W2PQH9 124 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 UPK3BL1B0FP48 263 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 UPK3BL2E5RIL1 263 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 PGRP06401 933 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 TRIM28Q13263 835 aaKnown RBP7.68□□□□□ -1.18
RFC4-204ENST00000417876 ZYXQ15942 572 aaKnown RBP7.68□□□□□ -1.18
RFC4-204ENST00000417876 TNNI3KQ59H18 835 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 ZBTB37Q5TC79 503 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 OVOS1Q6IE37 1185 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 ZNF746Q6NUN9 644 aaPredicted RBP7.68□□□□□ -1.18
RFC4-204ENST00000417876 IGF2-ASQ6U949 168 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.68□□□□□ -1.18
RFC4-204ENST00000417876 AGGF1Q8N302 714 aaeCLIP7.68□□□□□ -1.18
RFC4-204ENST00000417876 MKL1Q969V6 931 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 TRIM55Q9BYV6 548 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 FBRSQ9HAH7 460 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 ACTR10Q9NZ32 417 aa7.68□□□□□ -1.18
RFC4-204ENST00000417876 TLDC2A0PJX2 215 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 ALX3O95076 343 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 NEFMP07197 916 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 ADH5P11766 374 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 ELNP15502 786 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 RASA3Q14644 834 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 PPP2R5EQ16537 467 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 HP1BP3Q5SSJ5 553 aaPredicted RBP7.67□□□□□ -1.18
RFC4-204ENST00000417876 TTC6Q86TZ1 520 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 SMG8Q8ND04 991 aaKnown RBP7.67□□□□□ -1.18
RFC4-204ENST00000417876 SUGCTQ9HAC7 445 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 GMIPQ9P107 970 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 TJP2Q9UDY2 1190 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 MKL2Q9ULH7 1088 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 MSRB2Q9Y3D2 182 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 TBX22Q9Y458 520 aa7.67□□□□□ -1.18
RFC4-204ENST00000417876 TIAF1O95411 115 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 NME1P15531 152 aaKnown RBP7.66□□□□□ -1.18
RFC4-204ENST00000417876 GUCY2CP25092 1073 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 ETF1P62495 437 aaKnown RBP7.66□□□□□ -1.18
RFC4-204ENST00000417876 SOX4Q06945 474 aaPredicted RBP7.66□□□□□ -1.18
RFC4-204ENST00000417876 TTLL4Q14679 1199 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 NKG7Q16617 165 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 LRRFIP1Q32MZ4 808 aaKnown RBP7.66□□□□□ -1.18
RFC4-204ENST00000417876 NUTM2GQ5VZR2 741 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 JAZF1Q86VZ6 243 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 NLGN1Q8N2Q7 840 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 RNF214Q8ND24 703 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 SLC9A7Q96T83 725 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 MRPL18Q9H0U6 180 aaKnown RBP7.66□□□□□ -1.18
RFC4-204ENST00000417876 RNF208Q9H0X6 261 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 GSX1Q9H4S2 264 aaPredicted RBP7.66□□□□□ -1.18
RFC4-204ENST00000417876 SNTG2Q9NY99 539 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 KLHL3Q9UH77 587 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 ADAM30Q9UKF2 790 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 LTBP3Q9NS15 1303 aa7.66□□□□□ -1.18
RFC4-204ENST00000417876 F8W735 103 aaPredicted RBP7.65□□□□□ -1.18
RFC4-204ENST00000417876 FANCGO15287 622 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 HCLS1P14317 486 aaPredicted RBP7.65□□□□□ -1.18
RFC4-204ENST00000417876 PDE4BQ07343 736 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 DDR2Q16832 855 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 ARSHQ5FYA8 562 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 CDCP2Q5VXM1 449 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 UNC5AQ6ZN44 842 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 NLRC3Q7RTR2 1065 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 MCATQ8IVS2 390 aaKnown RBP7.65□□□□□ -1.18
RFC4-204ENST00000417876 TMEM130Q8N3G9 435 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 C19orf47Q8N9M1 422 aaKnown RBP7.65□□□□□ -1.18
RFC4-204ENST00000417876 C12orf50Q8NA57 414 aaPredicted RBP7.65□□□□□ -1.18
RFC4-204ENST00000417876 ZSCAN1Q8NBB4 408 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 DCAF11Q8TEB1 546 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 SRPK1Q96SB4 655 aaKnown RBP7.65□□□□□ -1.18
RFC4-204ENST00000417876 TM9SF2Q99805 663 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 CNNM2Q9H8M5 875 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 AP4E1Q9UPM8 1137 aa7.65□□□□□ -1.18
RFC4-204ENST00000417876 R3HCC1Q9Y3T6 440 aaKnown RBP7.65□□□□□ -1.18
RFC4-204ENST00000417876 CCDC85CA6NKD9 419 aa7.64□□□□□ -1.19
RFC4-204ENST00000417876 COL8A1P27658 744 aa7.64□□□□□ -1.19
RFC4-204ENST00000417876 NFE2L2Q16236 605 aa7.64□□□□□ -1.19
RFC4-204ENST00000417876 LARP1BQ659C4 914 aaKnown RBP7.64□□□□□ -1.19
RFC4-204ENST00000417876 DYMQ7RTS9 669 aa7.64□□□□□ -1.19
RFC4-204ENST00000417876 TAB3Q8N5C8 712 aaPredicted RBP7.64□□□□□ -1.19
RFC4-204ENST00000417876 C2CD4AQ8NCU7 369 aaPredicted RBP7.64□□□□□ -1.19
RFC4-204ENST00000417876 DEPDC7Q96QD5 511 aa7.64□□□□□ -1.19
RFC4-204ENST00000417876 CYP4F12Q9HCS2 524 aa7.64□□□□□ -1.19
RFC4-204ENST00000417876 FAM105AQ9NUU6 356 aa7.64□□□□□ -1.19
RFC4-204ENST00000417876 ACTL7BQ9Y614 415 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms