RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 DCAF8Q5TAQ9 597 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 FBXO18Q8NFZ0 1043 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 ZNF287Q9HBT7 754 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 SENP2Q9HC62 589 aa19.59■□□□□ 0.73
SSBP3-205ENST00000417664 CYP2D7A0A087X1C5 515 aa19.58■□□□□ 0.72
SSBP3-205ENST00000417664 IFNAR1P17181 557 aa19.58■□□□□ 0.72
SSBP3-205ENST00000417664 IARSP41252 1262 aaKnown RBP19.58■□□□□ 0.72
SSBP3-205ENST00000417664 FKBP1AP62942 108 aaKnown RBP19.58■□□□□ 0.72
SSBP3-205ENST00000417664 ZSCAN23Q3MJ62 389 aa19.58■□□□□ 0.72
SSBP3-205ENST00000417664 CCDC178Q5BJE1 867 aa19.58■□□□□ 0.72
SSBP3-205ENST00000417664 CCDC125Q86Z20 511 aa19.58■□□□□ 0.72
SSBP3-205ENST00000417664 WASF1Q92558 559 aa19.58■□□□□ 0.72
SSBP3-205ENST00000417664 CALM1P0DP23 149 aa19.57■□□□□ 0.72
SSBP3-205ENST00000417664 CALM2P0DP24 149 aa19.57■□□□□ 0.72
SSBP3-205ENST00000417664 CALM3P0DP25 149 aa19.57■□□□□ 0.72
SSBP3-205ENST00000417664 CDC27P30260 824 aa19.57■□□□□ 0.72
SSBP3-205ENST00000417664 MRE11P49959 708 aa19.57■□□□□ 0.72
SSBP3-205ENST00000417664 RTN1Q16799 776 aa19.57■□□□□ 0.72
SSBP3-205ENST00000417664 ZNF654Q8IZM8 581 aa19.57■□□□□ 0.72
SSBP3-205ENST00000417664 FAM217BQ9NTX9 383 aaPredicted RBP19.57■□□□□ 0.72
SSBP3-205ENST00000417664 GADD45BO75293 160 aaPredicted RBP19.56■□□□□ 0.72
SSBP3-205ENST00000417664 IFIT1BQ5T764 474 aaKnown RBP19.56■□□□□ 0.72
SSBP3-205ENST00000417664 STK11IPQ8N1F8 1099 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 ENAHQ8N8S7 591 aaPredicted RBP19.56■□□□□ 0.72
SSBP3-205ENST00000417664 ZNF396Q96N95 335 aaPredicted RBP19.56■□□□□ 0.72
SSBP3-205ENST00000417664 ZKSCAN3Q9BRR0 538 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 SSRP1Q08945 709 aaKnown RBP19.56■□□□□ 0.72
SSBP3-205ENST00000417664 BRAPQ7Z569 592 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 CATIPQ7Z7H3 387 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 RAB11FIP4Q86YS3 637 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 TEX11Q8IYF3 940 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 TRIM22Q8IYM9 498 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 FANCBQ8NB91 859 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 SUPT20HQ8NEM7 779 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 TGFBRAP1Q8WUH2 860 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 C7orf43Q8WVR3 580 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 SPATA32Q96LK8 384 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 TMEM63CQ9P1W3 806 aa19.56■□□□□ 0.72
SSBP3-205ENST00000417664 C10orf71Q711Q0 1435 aa19.55■□□□□ 0.72
SSBP3-205ENST00000417664 DDAH1O94760 285 aa19.55■□□□□ 0.72
SSBP3-205ENST00000417664 FMNL1O95466 1100 aaPredicted RBP19.55■□□□□ 0.72
SSBP3-205ENST00000417664 USP17L8P0C7I0 530 aa19.55■□□□□ 0.72
SSBP3-205ENST00000417664 RHBDL3P58872 404 aa19.55■□□□□ 0.72
SSBP3-205ENST00000417664 OLFM4Q6UX06 510 aa19.55■□□□□ 0.72
SSBP3-205ENST00000417664 MRIQ9BWK5 157 aa19.55■□□□□ 0.72
SSBP3-205ENST00000417664 RBM28Q9NW13 759 aaKnown RBP19.55■□□□□ 0.72
SSBP3-205ENST00000417664 NAV1Q8NEY1 1877 aa19.55■□□□□ 0.72
SSBP3-205ENST00000417664 SLX4Q8IY92 1834 aa19.54■□□□□ 0.72
SSBP3-205ENST00000417664 DLEC1Q9Y238 1755 aa19.54■□□□□ 0.72
SSBP3-205ENST00000417664 LETM1O95202 739 aaPredicted RBP19.54■□□□□ 0.72
SSBP3-205ENST00000417664 RXRAP19793 462 aa19.54■□□□□ 0.72
SSBP3-205ENST00000417664 HHIPL2Q6UWX4 724 aa19.54■□□□□ 0.72
SSBP3-205ENST00000417664 DEFB132Q7Z7B7 95 aa19.54■□□□□ 0.72
SSBP3-205ENST00000417664 TTC6Q86TZ1 520 aa19.54■□□□□ 0.72
SSBP3-205ENST00000417664 LEO1Q8WVC0 666 aaPredicted RBP19.54■□□□□ 0.72
SSBP3-205ENST00000417664 ALG1Q9BT22 464 aa19.54■□□□□ 0.72
SSBP3-205ENST00000417664 TSPY2A6NKD2 308 aa19.53■□□□□ 0.72
SSBP3-205ENST00000417664 SMIM22K7EJ46 135 aa19.53■□□□□ 0.72
SSBP3-205ENST00000417664 PRDM1O75626 825 aa19.53■□□□□ 0.72
SSBP3-205ENST00000417664 POLR3DP05423 398 aaPredicted RBP19.53■□□□□ 0.72
SSBP3-205ENST00000417664 CYP2D6P10635 497 aa19.53■□□□□ 0.72
SSBP3-205ENST00000417664 CHRNA5P30532 468 aa19.53■□□□□ 0.72
SSBP3-205ENST00000417664 DOK7Q18PE1 504 aa19.53■□□□□ 0.72
SSBP3-205ENST00000417664 STRIP1Q5VSL9 837 aa19.53■□□□□ 0.72
SSBP3-205ENST00000417664 FAM173BQ6P4H8 233 aa19.53■□□□□ 0.72
SSBP3-205ENST00000417664 MYL10Q9BUA6 226 aa19.53■□□□□ 0.72
SSBP3-205ENST00000417664 DAGLAQ9Y4D2 1042 aa19.53■□□□□ 0.72
SSBP3-205ENST00000417664 TRIM29Q14134 588 aa19.52■□□□□ 0.72
SSBP3-205ENST00000417664 DGKHQ86XP1 1220 aa19.52■□□□□ 0.72
SSBP3-205ENST00000417664 TCP11L1Q9NUJ3 509 aa19.52■□□□□ 0.72
SSBP3-205ENST00000417664 FLT1P17948 1338 aa19.52■□□□□ 0.72
SSBP3-205ENST00000417664 GOLGA6L4A6NEF3 574 aa19.52■□□□□ 0.71
SSBP3-205ENST00000417664 CCDC183Q5T5S1 534 aa19.52■□□□□ 0.71
SSBP3-205ENST00000417664 CCDC144CPQ8IYA2 1237 aa19.52■□□□□ 0.71
SSBP3-205ENST00000417664 CERS5Q8N5B7 392 aa19.52■□□□□ 0.71
SSBP3-205ENST00000417664 ANKS1AQ92625 1134 aa19.52■□□□□ 0.71
SSBP3-205ENST00000417664 MKNK2Q9HBH9 465 aa19.52■□□□□ 0.71
SSBP3-205ENST00000417664 RBM27Q9P2N5 1060 aaKnown RBP19.52■□□□□ 0.71
SSBP3-205ENST00000417664 TTF2Q9UNY4 1162 aaKnown RBP19.52■□□□□ 0.71
SSBP3-205ENST00000417664 SNED1Q8TER0 1413 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 MYH15Q9Y2K3 1946 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 DEXIO95424 95 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 HDLBPQ00341 1268 aaKnown RBP19.51■□□□□ 0.71
SSBP3-205ENST00000417664 TROAPQ12815 778 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 MAPKAPK5Q8IW41 473 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 CRACR2BQ8N4Y2 399 aaPredicted RBP19.51■□□□□ 0.71
SSBP3-205ENST00000417664 NUP133Q8WUM0 1156 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 PHKBQ93100 1093 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 FBXW7Q969H0 707 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 MAP3K14Q99558 947 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 SLC26A6Q9BXS9 759 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 RNF26Q9BY78 433 aaPredicted RBP19.51■□□□□ 0.71
SSBP3-205ENST00000417664 GRPEL1Q9HAV7 217 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 TFIP11Q9UBB9 837 aaKnown RBP19.51■□□□□ 0.71
SSBP3-205ENST00000417664 RCOR1Q9UKL0 485 aa19.51■□□□□ 0.71
SSBP3-205ENST00000417664 DDX60LQ5H9U9 1706 aaKnown RBP19.51■□□□□ 0.71
SSBP3-205ENST00000417664 CDK5RAP2Q96SN8 1893 aa19.5■□□□□ 0.71
SSBP3-205ENST00000417664 PPFIA3O75145 1194 aa19.5■□□□□ 0.71
SSBP3-205ENST00000417664 GUCY1B3Q02153 619 aa19.5■□□□□ 0.71
SSBP3-205ENST00000417664 KIAA2012Q0VF49 1180 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms