RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ALDH3A1P30838 453 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 DBNDD2Q9BQY9 259 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 PDE11AQ9HCR9 933 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 WWC3Q9ULE0 1092 aa13.44□□□□□ -0.26
UBR4-205ENST00000417040 NIP7Q9Y221 180 aaKnown RBP eCLIP13.44□□□□□ -0.26
UBR4-205ENST00000417040 GSPT1P15170 499 aaKnown RBP13.43□□□□□ -0.26
UBR4-205ENST00000417040 PEX19P40855 299 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 PPP2R5DQ14738 602 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 USP37Q86T82 979 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 RIMBP2O15034 1052 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 PRDM1O75626 825 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 ARHGAP25P42331 645 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 DMTNQ08495 405 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 TNNI3KQ59H18 835 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 HS2ST1Q7LGA3 356 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 GPR161Q8N6U8 529 aaKnown RBP13.43□□□□□ -0.26
UBR4-205ENST00000417040 UHMK1Q8TAS1 419 aaKnown RBP13.43□□□□□ -0.26
UBR4-205ENST00000417040 FAM207AQ9NSI2 230 aaPredicted RBP13.43□□□□□ -0.26
UBR4-205ENST00000417040 FPGT-TNNI3KV9GXZ4 949 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 A0A087WWV3 80 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 CA8P35219 290 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 RFC4P35249 363 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 SESN3P58005 492 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 ADAT2Q7Z6V5 191 aaKnown RBP13.43□□□□□ -0.26
UBR4-205ENST00000417040 RBM28Q9NW13 759 aaKnown RBP13.43□□□□□ -0.26
UBR4-205ENST00000417040 ASIC3Q9UHC3 531 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 IRS4O14654 1257 aaPredicted RBP13.43□□□□□ -0.26
UBR4-205ENST00000417040 CUTAO60888 179 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 RPSAP08865 295 aaKnown RBP13.43□□□□□ -0.26
UBR4-205ENST00000417040 ATL3Q6DD88 541 aa13.43□□□□□ -0.26
UBR4-205ENST00000417040 DDX41Q9UJV9 622 aaKnown RBP13.43□□□□□ -0.26
UBR4-205ENST00000417040 MRC2Q9UBG0 1479 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 ZWINTO95229 277 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 PARP1P09874 1014 aaKnown RBP13.42□□□□□ -0.26
UBR4-205ENST00000417040 DIS3L2Q8IYB7 885 aaKnown RBP13.42□□□□□ -0.26
UBR4-205ENST00000417040 PPP2R2CQ9Y2T4 447 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 SGSM2O43147 1006 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 PALD1Q9ULE6 856 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 GCKP35557 465 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 GEN1Q17RS7 908 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 INF2Q27J81 1249 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 RRAGAQ7L523 313 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 EDC3Q96F86 508 aaKnown RBP13.42□□□□□ -0.26
UBR4-205ENST00000417040 ACTN4O43707 911 aaKnown RBP13.42□□□□□ -0.26
UBR4-205ENST00000417040 GNAT2P19087 354 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 MAGEA1P43355 309 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 TTC38Q5R3I4 469 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 HHATQ5VTY9 493 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 CNNM4Q6P4Q7 775 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 VPS52Q8N1B4 723 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 TEX13AQ9BXU3 409 aaPredicted RBP13.42□□□□□ -0.26
UBR4-205ENST00000417040 NLRC4Q9NPP4 1024 aa13.42□□□□□ -0.26
UBR4-205ENST00000417040 DEXIO95424 95 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 BRD1O95696 1058 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 ZNF827Q17R98 1081 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 TMTC1Q8IUR5 882 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 MICAL1Q8TDZ2 1067 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 ODF2LQ9ULJ1 636 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 PPP2R5CQ13362 524 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 LINS1Q8NG48 757 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 EPSTI1Q96J88 318 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 DDX39AO00148 427 aaKnown RBP13.41□□□□□ -0.26
UBR4-205ENST00000417040 PAK2Q13177 524 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 RNF10Q8N5U6 811 aaKnown RBP13.41□□□□□ -0.26
UBR4-205ENST00000417040 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 ZMYND10O75800 440 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 TUBB2AQ13885 445 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 TSNAXIP1Q2TAA8 658 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 KRT71Q3SY84 523 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 RILPL1Q5EBL4 403 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 KCTD16Q68DU8 428 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 TUBB2BQ9BVA1 445 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 MKRN1Q9UHC7 482 aaKnown RBP13.41□□□□□ -0.26
UBR4-205ENST00000417040 TPX2Q9ULW0 747 aaKnown RBP13.41□□□□□ -0.26
UBR4-205ENST00000417040 TBC1D8O95759 1140 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 BIRC3Q13489 604 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 CAPS2Q9BXY5 557 aa13.41□□□□□ -0.26
UBR4-205ENST00000417040 CTNNA1P35221 906 aaKnown RBP13.4□□□□□ -0.26
UBR4-205ENST00000417040 PTH1RQ03431 593 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 TAOK1Q7L7X3 1001 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 CCDC105Q8IYK2 499 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 MLKLQ8NB16 471 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 CTTNBP2NLQ9P2B4 639 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 GNA11P29992 359 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 CCT5P48643 541 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 PLCD1P51178 756 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 CFAP221Q4G0U5 840 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 KRT40Q6A162 431 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 CAPN12Q6ZSI9 719 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 ZNF365Q70YC5 407 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 C2CD5Q86YS7 1000 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 ZCRB1Q8TBF4 217 aaKnown RBP13.4□□□□□ -0.26
UBR4-205ENST00000417040 CCDC110Q8TBZ0 833 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 CABLES1Q8TDN4 633 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 NCAPH2Q6IBW4 605 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 CCDC62Q6P9F0 684 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 UBL4BQ8N7F7 174 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 SAR1BQ9Y6B6 198 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 MAP3K5Q99683 1374 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms