RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 RHPN1Q8TCX5 695 aa21.47■■□□□ 1.03
PDLIM2-208ENST00000416159 TGFBRAP1Q8WUH2 860 aa21.47■■□□□ 1.03
PDLIM2-208ENST00000416159 TBC1D2Q9BYX2 928 aa21.47■■□□□ 1.03
PDLIM2-208ENST00000416159 COG6Q9Y2V7 657 aa21.47■■□□□ 1.03
PDLIM2-208ENST00000416159 MYO5AQ9Y4I1 1855 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-208ENST00000416159 CYP7A1P22680 504 aa21.46■■□□□ 1.03
PDLIM2-208ENST00000416159 CAP2P40123 477 aa21.46■■□□□ 1.03
PDLIM2-208ENST00000416159 PSMC4P43686 418 aa21.46■■□□□ 1.03
PDLIM2-208ENST00000416159 TMED8Q6PL24 325 aaPredicted RBP21.46■■□□□ 1.03
PDLIM2-208ENST00000416159 TMEM106CQ9BVX2 250 aa21.46■■□□□ 1.03
PDLIM2-208ENST00000416159 ZBTB40Q9NUA8 1239 aa21.46■■□□□ 1.03
PDLIM2-208ENST00000416159 POTEFA5A3E0 1075 aa21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 TRIM75PA6NK02 468 aa21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 IDH1O75874 414 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 CYP2C8P10632 490 aa21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 BCRP11274 1271 aa21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 CERS3Q8IU89 383 aa21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 FOXP4Q8IVH2 680 aaPredicted RBP21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 MAPKAPK5Q8IW41 473 aa21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 KIF1BPQ96EK5 621 aa21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 ZNF333Q96JL9 665 aa21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 IL1RAPL2Q9NP60 686 aa21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 PHIPQ8WWQ0 1821 aa21.45■■□□□ 1.02
PDLIM2-208ENST00000416159 FMNL1O95466 1100 aaPredicted RBP21.44■■□□□ 1.02
PDLIM2-208ENST00000416159 MAP3K12Q12852 859 aa21.44■■□□□ 1.02
PDLIM2-208ENST00000416159 CCDC84Q86UT8 332 aaPredicted RBP21.44■■□□□ 1.02
PDLIM2-208ENST00000416159 CLASRPQ8N2M8 674 aaKnown RBP21.44■■□□□ 1.02
PDLIM2-208ENST00000416159 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.44■■□□□ 1.02
PDLIM2-208ENST00000416159 PTPRFP10586 1907 aa21.44■■□□□ 1.02
PDLIM2-208ENST00000416159 FLT1P17948 1338 aa21.44■■□□□ 1.02
PDLIM2-208ENST00000416159 USP17L5A8MUK1 530 aa21.43■■□□□ 1.02
PDLIM2-208ENST00000416159 CTGFP29279 349 aa21.43■■□□□ 1.02
PDLIM2-208ENST00000416159 DYNLL1P63167 89 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-208ENST00000416159 SPP2Q13103 211 aa21.43■■□□□ 1.02
PDLIM2-208ENST00000416159 ZNF280CQ8ND82 737 aa21.43■■□□□ 1.02
PDLIM2-208ENST00000416159 TRIM47Q96LD4 638 aa21.43■■□□□ 1.02
PDLIM2-208ENST00000416159 AS3MTQ9HBK9 375 aa21.43■■□□□ 1.02
PDLIM2-208ENST00000416159 SRRDQ9UH36 339 aa21.43■■□□□ 1.02
PDLIM2-208ENST00000416159 AGTPBP1Q9UPW5 1226 aa21.43■■□□□ 1.02
PDLIM2-208ENST00000416159 ZSWIM8A7E2V4 1837 aa21.42■■□□□ 1.02
PDLIM2-208ENST00000416159 RAB11FIP3O75154 756 aa21.42■■□□□ 1.02
PDLIM2-208ENST00000416159 ECM2O94769 699 aaPredicted RBP21.42■■□□□ 1.02
PDLIM2-208ENST00000416159 RRP1BQ14684 758 aaKnown RBP21.42■■□□□ 1.02
PDLIM2-208ENST00000416159 METTL16Q86W50 562 aaKnown RBP21.42■■□□□ 1.02
PDLIM2-208ENST00000416159 MAGEB6Q8N7X4 407 aa21.42■■□□□ 1.02
PDLIM2-208ENST00000416159 PROCA1Q8NCQ7 364 aaPredicted RBP21.42■■□□□ 1.02
PDLIM2-208ENST00000416159 TRIM34Q9BYJ4 488 aa21.42■■□□□ 1.02
PDLIM2-208ENST00000416159 ANTXR1Q9H6X2 564 aa21.42■■□□□ 1.02
PDLIM2-208ENST00000416159 NDUFB9Q9Y6M9 179 aa21.42■■□□□ 1.02
PDLIM2-208ENST00000416159 CDK5RAP2Q96SN8 1893 aa21.41■■□□□ 1.02
PDLIM2-208ENST00000416159 HLA-DOAP06340 250 aa21.41■■□□□ 1.02
PDLIM2-208ENST00000416159 OSBPP22059 807 aa21.41■■□□□ 1.02
PDLIM2-208ENST00000416159 FCGRTP55899 365 aa21.41■■□□□ 1.02
PDLIM2-208ENST00000416159 TTF1Q15361 905 aaPredicted RBP21.41■■□□□ 1.02
PDLIM2-208ENST00000416159 SIRT2Q8IXJ6 389 aa21.41■■□□□ 1.02
PDLIM2-208ENST00000416159 CRACR2BQ8N4Y2 399 aaPredicted RBP21.41■■□□□ 1.02
PDLIM2-208ENST00000416159 GINM1Q9NU53 330 aa21.41■■□□□ 1.02
PDLIM2-208ENST00000416159 PNMA3Q9UL41 463 aa21.41■■□□□ 1.02
PDLIM2-208ENST00000416159 PALD1Q9ULE6 856 aa21.41■■□□□ 1.02
PDLIM2-208ENST00000416159 RBBP6Q7Z6E9 1792 aaKnown RBP21.41■■□□□ 1.02
PDLIM2-208ENST00000416159 APBB1O00213 710 aa21.4■■□□□ 1.02
PDLIM2-208ENST00000416159 ASNSP08243 561 aa21.4■■□□□ 1.02
PDLIM2-208ENST00000416159 IFIT2P09913 472 aaKnown RBP21.4■■□□□ 1.02
PDLIM2-208ENST00000416159 PDE3AQ14432 1141 aa21.4■■□□□ 1.02
PDLIM2-208ENST00000416159 SLC4A8Q2Y0W8 1093 aa21.4■■□□□ 1.02
PDLIM2-208ENST00000416159 MIGA1Q8NAN2 632 aa21.4■■□□□ 1.02
PDLIM2-208ENST00000416159 RAET1EQ8TD07 263 aa21.4■■□□□ 1.02
PDLIM2-208ENST00000416159 SMCR8Q8TEV9 937 aaPredicted RBP21.4■■□□□ 1.02
PDLIM2-208ENST00000416159 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.4■■□□□ 1.02
PDLIM2-208ENST00000416159 FOCADQ5VW36 1801 aa21.4■■□□□ 1.02
PDLIM2-208ENST00000416159 ATAD5Q96QE3 1844 aa21.4■■□□□ 1.02
PDLIM2-208ENST00000416159 MYPNQ86TC9 1320 aa21.39■■□□□ 1.01
PDLIM2-208ENST00000416159 EN2P19622 333 aaPredicted RBP21.39■■□□□ 1.01
PDLIM2-208ENST00000416159 USP5P45974 858 aa21.39■■□□□ 1.01
PDLIM2-208ENST00000416159 PABPC4Q13310 644 aaKnown RBP eCLIP21.39■■□□□ 1.01
PDLIM2-208ENST00000416159 SH3D19Q5HYK7 790 aa21.39■■□□□ 1.01
PDLIM2-208ENST00000416159 SH3TC2Q8TF17 1288 aa21.39■■□□□ 1.01
PDLIM2-208ENST00000416159 WDR18Q9BV38 432 aa21.39■■□□□ 1.01
PDLIM2-208ENST00000416159 SAP30BPQ9UHR5 308 aaKnown RBP21.39■■□□□ 1.01
PDLIM2-208ENST00000416159 HMGCS2P54868 508 aa21.38■■□□□ 1.01
PDLIM2-208ENST00000416159 TREML2Q5T2D2 321 aa21.38■■□□□ 1.01
PDLIM2-208ENST00000416159 PRPF38BQ5VTL8 546 aaKnown RBP21.38■■□□□ 1.01
PDLIM2-208ENST00000416159 DNAJC18Q9H819 358 aa21.38■■□□□ 1.01
PDLIM2-208ENST00000416159 SIPA1L1O43166 1804 aa21.38■■□□□ 1.01
PDLIM2-208ENST00000416159 GRK4P32298 578 aa21.37■■□□□ 1.01
PDLIM2-208ENST00000416159 HTTP42858 3142 aa21.36■■□□□ 1.01
PDLIM2-208ENST00000416159 MYH1P12882 1939 aa21.36■■□□□ 1.01
PDLIM2-208ENST00000416159 TNRC18O15417 2968 aaPredicted RBP21.36■■□□□ 1.01
PDLIM2-208ENST00000416159 MGAMO43451 1857 aa21.36■■□□□ 1.01
PDLIM2-208ENST00000416159 C19orf81C9J6K1 198 aa21.35■■□□□ 1.01
PDLIM2-208ENST00000416159 GCLCP48506 637 aaPredicted RBP21.35■■□□□ 1.01
PDLIM2-208ENST00000416159 BACE1P56817 501 aa21.35■■□□□ 1.01
PDLIM2-208ENST00000416159 PRKCZQ05513 592 aa21.35■■□□□ 1.01
PDLIM2-208ENST00000416159 TTC6Q86TZ1 520 aa21.35■■□□□ 1.01
PDLIM2-208ENST00000416159 TMOD4Q9NZQ9 345 aa21.35■■□□□ 1.01
PDLIM2-208ENST00000416159 MAGEB6P1A0A0J9YX57 407 aa21.34■■□□□ 1.01
PDLIM2-208ENST00000416159 GDF11O95390 407 aa21.34■■□□□ 1.01
PDLIM2-208ENST00000416159 MYCP01106 439 aaPredicted RBP21.34■■□□□ 1.01
PDLIM2-208ENST00000416159 JAG1P78504 1218 aa21.34■■□□□ 1.01
PDLIM2-208ENST00000416159 FAM110CQ1W6H9 321 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms