RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 THEGQ9P2T0 379 aa7.86□□□□□ -1.15
LMBR1-204ENST00000415428 PCDHAC2Q9Y5I4 1007 aa7.86□□□□□ -1.15
LMBR1-204ENST00000415428 MAPK8IP3Q9UPT6 1336 aa7.86□□□□□ -1.15
LMBR1-204ENST00000415428 PFKMP08237 780 aa7.86□□□□□ -1.15
LMBR1-204ENST00000415428 COPB2P35606 906 aa7.86□□□□□ -1.15
LMBR1-204ENST00000415428 TTLL12Q14166 644 aaPredicted RBP7.86□□□□□ -1.15
LMBR1-204ENST00000415428 CDC42EP5Q6NZY7 148 aa7.86□□□□□ -1.15
LMBR1-204ENST00000415428 KIAA0825Q8IV33 1275 aa7.86□□□□□ -1.15
LMBR1-204ENST00000415428 WRNIP1Q96S55 665 aa7.86□□□□□ -1.15
LMBR1-204ENST00000415428 ZNF330Q9Y3S2 320 aaPredicted RBP7.86□□□□□ -1.15
LMBR1-204ENST00000415428 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.85□□□□□ -1.15
LMBR1-204ENST00000415428 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.85□□□□□ -1.15
LMBR1-204ENST00000415428 CD4P01730 458 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 TFRCP02786 760 aaKnown RBP7.85□□□□□ -1.15
LMBR1-204ENST00000415428 RHBDL3P58872 404 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 CACNB2Q08289 660 aaPredicted RBP7.85□□□□□ -1.15
LMBR1-204ENST00000415428 RAB30Q15771 203 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 PRAMEF18Q5VWM3 479 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 TATDN1Q6P1N9 297 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 MAMDC4Q6UXC1 1216 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 ZNF428Q96B54 188 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 MAP3K2Q9Y2U5 619 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 RABGAP1Q9Y3P9 1069 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 FAM177BA6PVY3 158 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 NEFMP07197 916 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 MAP2K5Q13163 448 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 C7orf61Q8IZ16 206 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 ZGPATQ8N5A5 531 aaKnown RBP7.85□□□□□ -1.15
LMBR1-204ENST00000415428 ANKRD44Q8N8A2 993 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 MROH7Q68CQ1 1323 aa7.85□□□□□ -1.15
LMBR1-204ENST00000415428 RFC2P35250 354 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 MTX1Q13505 466 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 CC2D1BQ5T0F9 858 aaKnown RBP7.84□□□□□ -1.15
LMBR1-204ENST00000415428 CCDC174Q6PII3 467 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 CDAN1Q8IWY9 1227 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 PHOSPHO2Q8TCD6 241 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 DEFB118Q96PH6 123 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 PRKAG3Q9UGI9 489 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 CPA4Q9UI42 421 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 ELP1O95163 1332 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 STRNO43815 780 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 PTPREP23469 700 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 AAK1Q2M2I8 961 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 MICALL1Q8N3F8 863 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 VWCEQ96DN2 955 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 PHAXQ9H814 394 aaKnown RBP7.84□□□□□ -1.15
LMBR1-204ENST00000415428 A0A1B0GUL7 405 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 ATP2A1O14983 1001 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 WDR63Q8IWG1 891 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 MORC4Q8TE76 937 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 TDRD3Q9H7E2 651 aaKnown RBP7.84□□□□□ -1.15
LMBR1-204ENST00000415428 Q9Y3F1 56 aa7.84□□□□□ -1.15
LMBR1-204ENST00000415428 MYO5AQ9Y4I1 1855 aaKnown RBP7.84□□□□□ -1.15
LMBR1-204ENST00000415428 PDE8BO95263 885 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 PAPLNO95428 1278 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 MFSD14BQ5SR56 506 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 Q7L0L9 218 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 RIC3Q7Z5B4 369 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 TTF2Q9UNY4 1162 aaKnown RBP7.83□□□□□ -1.16
LMBR1-204ENST00000415428 PCDHA11Q9Y5I1 949 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 SCN10AQ9Y5Y9 1956 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 MOXD2PA6NHM9 499 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 AS3MTQ9HBK9 375 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 RTP1P59025 263 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 TRPV1Q8NER1 839 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 LRFN3Q9BTN0 628 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 RBPJLQ9UBG7 517 aa7.83□□□□□ -1.16
LMBR1-204ENST00000415428 MROH7-TTC4A0A0A0MT08 1334 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 TRIM43BA6NCK2 446 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 ATP5J2-PTCD1G3V325 749 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 FMNL1O95466 1100 aaPredicted RBP7.82□□□□□ -1.16
LMBR1-204ENST00000415428 TIMP1P01033 207 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 CAP2P40123 477 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 SLF2Q8IX21 1173 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 MB21D1Q8N884 522 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 ARRDC4Q8NCT1 418 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 ZNF280CQ8ND82 737 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 DNAAF4Q8WXU2 420 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 TRIM43Q96BQ3 446 aaPredicted RBP7.82□□□□□ -1.16
LMBR1-204ENST00000415428 NUDT12Q9BQG2 462 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 DHX36Q9H2U1 1008 aaKnown RBP7.82□□□□□ -1.16
LMBR1-204ENST00000415428 G3V3G9 751 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 SEPT4O43236 478 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 ADAMTS4O75173 837 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 ARID4AP29374 1257 aaPredicted RBP7.82□□□□□ -1.16
LMBR1-204ENST00000415428 NEXNQ0ZGT2 675 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 PUM3Q15397 648 aaKnown RBP7.82□□□□□ -1.16
LMBR1-204ENST00000415428 SHHQ15465 462 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 GRIK5Q16478 980 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 LEXMQ3ZCV2 418 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 DCAF8Q5TAQ9 597 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 ADAMTS19Q8TE59 1207 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 HCN4Q9Y3Q4 1203 aa7.82□□□□□ -1.16
LMBR1-204ENST00000415428 TNPO2O14787 897 aaKnown RBP7.81□□□□□ -1.16
LMBR1-204ENST00000415428 INPP5BP32019 993 aa7.81□□□□□ -1.16
LMBR1-204ENST00000415428 KIAA1683Q9H0B3 1180 aa7.81□□□□□ -1.16
LMBR1-204ENST00000415428 IRF2BPLQ9H1B7 796 aa7.81□□□□□ -1.16
LMBR1-204ENST00000415428 ASCC2Q9H1I8 757 aaPredicted RBP7.81□□□□□ -1.16
LMBR1-204ENST00000415428 PTPRCP08575 1304 aa7.81□□□□□ -1.16
LMBR1-204ENST00000415428 IFIT5Q13325 482 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms