RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 KCNK17Q96T54 332 aa11.78□□□□□ -0.52
LINC01090-201ENST00000415357 BCL11AQ9H165 835 aa11.78□□□□□ -0.52
LINC01090-201ENST00000415357 FAM198AQ9UFP1 575 aa11.78□□□□□ -0.52
LINC01090-201ENST00000415357 MROH7-TTC4A0A0A0MT08 1334 aa11.78□□□□□ -0.52
LINC01090-201ENST00000415357 TULP1O00294 542 aaPredicted RBP11.77□□□□□ -0.53
LINC01090-201ENST00000415357 CA12O43570 354 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 TRPA1O75762 1119 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 GJA5P36382 358 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 BTDP43251 543 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 ZAP70P43403 619 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 TSR1Q2NL82 804 aaKnown RBP11.77□□□□□ -0.53
LINC01090-201ENST00000415357 CCDC158Q5M9N0 1113 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 IFFO2Q5TF58 517 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 FKBP1CQ5VVH2 108 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 SPRYD7Q5W111 196 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 SPTY2D1Q68D10 685 aaPredicted RBP11.77□□□□□ -0.53
LINC01090-201ENST00000415357 AACSQ86V21 672 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 ZFPM1Q8IX07 1006 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 RPAP2Q8IXW5 612 aaPredicted RBP11.77□□□□□ -0.53
LINC01090-201ENST00000415357 SLC10A4Q96EP9 437 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 WNK4Q96J92 1243 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 ELP3Q9H9T3 547 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 RNF186Q9NXI6 227 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 RAI14Q9P0K7 980 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 NDUFB9Q9Y6M9 179 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 RFX7Q2KHR2 1363 aa11.77□□□□□ -0.53
LINC01090-201ENST00000415357 RPAP1Q9BWH6 1393 aaPredicted RBP11.77□□□□□ -0.53
LINC01090-201ENST00000415357 AKAP11Q9UKA4 1901 aa11.76□□□□□ -0.53
LINC01090-201ENST00000415357 HMMRO75330 724 aa11.76□□□□□ -0.53
LINC01090-201ENST00000415357 CYP2E1P05181 493 aaPredicted RBP11.76□□□□□ -0.53
LINC01090-201ENST00000415357 POTEEQ6S8J3 1075 aa11.76□□□□□ -0.53
LINC01090-201ENST00000415357 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.76□□□□□ -0.53
LINC01090-201ENST00000415357 ERC1Q8IUD2 1116 aa11.76□□□□□ -0.53
LINC01090-201ENST00000415357 ANKRD13AQ8IZ07 590 aa11.76□□□□□ -0.53
LINC01090-201ENST00000415357 RHPN1Q8TCX5 695 aa11.76□□□□□ -0.53
LINC01090-201ENST00000415357 FAM151AQ8WW52 585 aa11.76□□□□□ -0.53
LINC01090-201ENST00000415357 NSUN4Q96CB9 384 aaKnown RBP11.76□□□□□ -0.53
LINC01090-201ENST00000415357 DDX4Q9NQI0 724 aaKnown RBP11.76□□□□□ -0.53
LINC01090-201ENST00000415357 MAST2Q6P0Q8 1798 aa11.76□□□□□ -0.53
LINC01090-201ENST00000415357 SLURP2P0DP57 97 aa11.75□□□□□ -0.53
LINC01090-201ENST00000415357 PTPREP23469 700 aa11.75□□□□□ -0.53
LINC01090-201ENST00000415357 RGS3P49796 1198 aa11.75□□□□□ -0.53
LINC01090-201ENST00000415357 PSEN2P49810 448 aa11.75□□□□□ -0.53
LINC01090-201ENST00000415357 RRP1P56182 461 aaKnown RBP11.75□□□□□ -0.53
LINC01090-201ENST00000415357 PICALMQ13492 652 aa11.75□□□□□ -0.53
LINC01090-201ENST00000415357 VGLL4Q14135 290 aa11.75□□□□□ -0.53
LINC01090-201ENST00000415357 MIGA2Q7L4E1 593 aa11.75□□□□□ -0.53
LINC01090-201ENST00000415357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC01090-201ENST00000415357 WRNIP1Q96S55 665 aa11.75□□□□□ -0.53
LINC01090-201ENST00000415357 CHMP4BQ9H444 224 aaKnown RBP11.75□□□□□ -0.53
LINC01090-201ENST00000415357 PIH1D3Q9NQM4 214 aaKnown RBP11.75□□□□□ -0.53
LINC01090-201ENST00000415357 SAGE1Q9NXZ1 904 aa11.75□□□□□ -0.53
LINC01090-201ENST00000415357 LRP2BPQ9P2M1 347 aa11.75□□□□□ -0.53
LINC01090-201ENST00000415357 MYO5AQ9Y4I1 1855 aaKnown RBP11.74□□□□□ -0.53
LINC01090-201ENST00000415357 GPR75-ASB3A0A0A6YYF3 556 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 WDHD1O75717 1129 aaPredicted RBP11.74□□□□□ -0.53
LINC01090-201ENST00000415357 RHBDL3P58872 404 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 HSP90AB4PQ58FF6 505 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 C6orf132Q5T0Z8 1188 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 ZKSCAN4Q969J2 545 aaPredicted RBP11.74□□□□□ -0.53
LINC01090-201ENST00000415357 OPTNQ96CV9 577 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 KIF1BPQ96EK5 621 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 ZNF512BQ96KM6 892 aaPredicted RBP11.74□□□□□ -0.53
LINC01090-201ENST00000415357 IDI2Q9BXS1 227 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 CDHR5Q9HBB8 845 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 SNCAIPQ9Y6H5 919 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 DOCK2Q92608 1830 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 CASP8AP2Q9UKL3 1982 aa11.74□□□□□ -0.53
LINC01090-201ENST00000415357 ARHGAP33O14559 1287 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 TBC1D8O95759 1140 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 ZBTB48P10074 688 aaPredicted RBP11.73□□□□□ -0.53
LINC01090-201ENST00000415357 INPP5BP32019 993 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 PBX2P40425 430 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 TM4SF4P48230 202 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 GSTO1P78417 241 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 SREBF2Q12772 1141 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 ATRNL1Q5VV63 1379 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 DCAF15Q66K64 600 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 NAA16Q6N069 864 aaPredicted RBP11.73□□□□□ -0.53
LINC01090-201ENST00000415357 SH3BP5LQ7L8J4 393 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 ADGRA1Q86SQ6 560 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 ANTXR1Q9H6X2 564 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 CSADQ9Y600 493 aa11.73□□□□□ -0.53
LINC01090-201ENST00000415357 AK9Q5TCS8 1911 aa11.72□□□□□ -0.53
LINC01090-201ENST00000415357 LAMB1P07942 1786 aa11.72□□□□□ -0.53
LINC01090-201ENST00000415357 DDTLA6NHG4 134 aaPredicted RBP11.72□□□□□ -0.53
LINC01090-201ENST00000415357 MANSC4A6NHS7 340 aaPredicted RBP11.72□□□□□ -0.53
LINC01090-201ENST00000415357 UNCXA6NJT0 531 aa11.72□□□□□ -0.53
LINC01090-201ENST00000415357 IGF2BP3O00425 579 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC01090-201ENST00000415357 ENTPD3O75355 529 aa11.72□□□□□ -0.53
LINC01090-201ENST00000415357 LDHCP07864 332 aa11.72□□□□□ -0.53
LINC01090-201ENST00000415357 ZSCAN29Q8IWY8 852 aaPredicted RBP11.72□□□□□ -0.53
LINC01090-201ENST00000415357 CLASRPQ8N2M8 674 aaKnown RBP11.72□□□□□ -0.53
LINC01090-201ENST00000415357 ZNF341Q9BYN7 854 aa11.72□□□□□ -0.53
LINC01090-201ENST00000415357 R3HDMLQ9H3Y0 253 aa11.72□□□□□ -0.53
LINC01090-201ENST00000415357 AATFQ9NY61 560 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC01090-201ENST00000415357 SMARCA5O60264 1052 aaPredicted RBP11.71□□□□□ -0.53
LINC01090-201ENST00000415357 RAB11FIP3O75154 756 aa11.71□□□□□ -0.53
LINC01090-201ENST00000415357 IDH1O75874 414 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms