RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ALDH1L2Q3SY69 923 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 MIGA2Q7L4E1 593 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 MRPL50Q8N5N7 158 aaKnown RBP10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 KLHDC4Q8TBB5 520 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 ZNF341Q9BYN7 854 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 RBM27Q9P2N5 1060 aaKnown RBP10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 SRRDQ9UH36 339 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 LOC285556D6RIA3 1793 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 PTPRCP08575 1304 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 MYPNQ86TC9 1320 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 PDHXO00330 501 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 GRK4P32298 578 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 SSTR3P32745 418 aaPredicted RBP10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 EVX2Q03828 476 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 PPATQ06203 517 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 MOGSQ13724 837 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 CAVIN4Q5BKX8 364 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 IER5LQ5T953 404 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 FKBP1CQ5VVH2 108 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 UBE2Q1Q7Z7E8 422 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 ANKRD23Q86SG2 305 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 RAET1EQ8TD07 263 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 CDHR5Q9HBB8 845 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 KCNH4Q9UQ05 1017 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 KIF16BQ96L93 1317 aa10.3□□□□□ -0.76
UPF3AP1-201ENST00000413731 ATRNL1Q5VV63 1379 aa10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 PDE8BO95263 885 aa10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 CCL5P13501 91 aa10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 PRKCZQ05513 592 aa10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 TCP10Q12799 353 aa10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 NFIAQ12857 509 aa10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 PUM3Q15397 648 aaKnown RBP10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 DIXDC1Q155Q3 683 aa10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 HHIPL2Q6UWX4 724 aa10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 DPF3Q92784 378 aa10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 HOOK2Q96ED9 719 aa10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 CCDC97Q96F63 343 aaPredicted RBP10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 DAGLAQ9Y4D2 1042 aa10.29□□□□□ -0.76
UPF3AP1-201ENST00000413731 RFX7Q2KHR2 1363 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 HAX1O00165 279 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 FARP2O94887 1054 aaPredicted RBP10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 FMNL1O95466 1100 aaPredicted RBP10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 CYP2C8P10632 490 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 BCRP11274 1271 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 FGFR2P21802 821 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 GJA8P48165 433 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 NOL9Q5SY16 702 aaKnown RBP10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 CDC42EP5Q6NZY7 148 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 TMEM92Q6UXU6 159 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 FAM151AQ8WW52 585 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 PARK7Q99497 189 aaKnown RBP10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 MRIQ9BWK5 157 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 RNF208Q9H0X6 261 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 POLR3EQ9NVU0 708 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 ZNF112Q9UJU3 913 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 SUGT1Q9Y2Z0 365 aa10.28□□□□□ -0.76
UPF3AP1-201ENST00000413731 DDX60LQ5H9U9 1706 aaKnown RBP10.27□□□□□ -0.76
UPF3AP1-201ENST00000413731 GJB1P08034 283 aa10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 IFIT1P09914 478 aaKnown RBP10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 PRDX5P30044 214 aa10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 RARSP54136 660 aaKnown RBP10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 FCGRTP55899 365 aa10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 GPAT2Q6NUI2 795 aa10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 NKX2-3Q8TAU0 364 aa10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 YTHDC1Q96MU7 727 aaKnown RBP10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 UNC93B1Q9H1C4 597 aa10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 PRO3102Q9H379 93 aa10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 FAM198AQ9UFP1 575 aa10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 GABRQQ9UN88 632 aa10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 PLXNB2O15031 1838 aa10.27□□□□□ -0.77
UPF3AP1-201ENST00000413731 CDK5RAP2Q96SN8 1893 aa10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 SLC5A1P13866 664 aa10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 HOXD10P28358 340 aa10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 RFX5P48382 616 aaPredicted RBP10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 UBXN2AP68543 259 aa10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 PROCA1Q8NCQ7 364 aaPredicted RBP10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 SLAIN1Q8ND83 568 aa10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 WDR66Q8TBY9 1149 aa10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 U2AF1L4Q8WU68 220 aaKnown RBP10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 EPAS1Q99814 870 aa10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 HTATIP2Q9BUP3 242 aa10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 TMUB1Q9BVT8 246 aa10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 API5Q9BZZ5 524 aaKnown RBP10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 BIN2Q9UBW5 565 aaPredicted RBP10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 NOB1Q9ULX3 412 aaKnown RBP10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 SIPA1L1O43166 1804 aa10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 FRMPD3Q5JV73 1810 aa10.26□□□□□ -0.77
UPF3AP1-201ENST00000413731 ZBTB7BO15156 539 aaPredicted RBP10.25□□□□□ -0.77
UPF3AP1-201ENST00000413731 ATMINO43313 823 aaPredicted RBP10.25□□□□□ -0.77
UPF3AP1-201ENST00000413731 INHAP05111 366 aa10.25□□□□□ -0.77
UPF3AP1-201ENST00000413731 SLURP2P0DP57 97 aa10.25□□□□□ -0.77
UPF3AP1-201ENST00000413731 ELNP15502 786 aa10.25□□□□□ -0.77
UPF3AP1-201ENST00000413731 ZFPM1Q8IX07 1006 aa10.25□□□□□ -0.77
UPF3AP1-201ENST00000413731 FRAT1Q92837 279 aaPredicted RBP10.25□□□□□ -0.77
UPF3AP1-201ENST00000413731 LAMA3Q16787 3333 aa10.25□□□□□ -0.77
UPF3AP1-201ENST00000413731 A0A0G2JLL6 359 aaPredicted RBP10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 EYA2O00167 538 aa10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 SOX1O00570 391 aaPredicted RBP10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 CXCL11O14625 94 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms