RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 POLR3DP05423 398 aaPredicted RBP14.42□□□□□ -0.1
NEDD1-202ENST00000411739 NEFLP07196 543 aa14.42□□□□□ -0.1
NEDD1-202ENST00000411739 CCDC129Q6ZRS4 1044 aa14.42□□□□□ -0.1
NEDD1-202ENST00000411739 CRACR2BQ8N4Y2 399 aaPredicted RBP14.42□□□□□ -0.1
NEDD1-202ENST00000411739 APPBP2Q92624 585 aa14.42□□□□□ -0.1
NEDD1-202ENST00000411739 DNAJC18Q9H819 358 aa14.42□□□□□ -0.1
NEDD1-202ENST00000411739 DCP1AQ9NPI6 582 aaPredicted RBP14.42□□□□□ -0.1
NEDD1-202ENST00000411739 MYH7P12883 1935 aa14.42□□□□□ -0.1
NEDD1-202ENST00000411739 TRPA1O75762 1119 aa14.42□□□□□ -0.1
NEDD1-202ENST00000411739 MAP3K10Q02779 954 aa14.42□□□□□ -0.1
NEDD1-202ENST00000411739 EVI5LQ96CN4 794 aa14.42□□□□□ -0.1
NEDD1-202ENST00000411739 BEGAINQ9BUH8 593 aa14.42□□□□□ -0.1
NEDD1-202ENST00000411739 DHX36Q9H2U1 1008 aaKnown RBP14.42□□□□□ -0.1
NEDD1-202ENST00000411739 JAG1P78504 1218 aa14.41□□□□□ -0.1
NEDD1-202ENST00000411739 TMED8Q6PL24 325 aaPredicted RBP14.41□□□□□ -0.1
NEDD1-202ENST00000411739 STRBPQ96SI9 672 aaKnown RBP14.41□□□□□ -0.1
NEDD1-202ENST00000411739 IRF6O14896 467 aa14.41□□□□□ -0.1
NEDD1-202ENST00000411739 GPAA1O43292 621 aa14.41□□□□□ -0.1
NEDD1-202ENST00000411739 CERS3Q8IU89 383 aa14.41□□□□□ -0.1
NEDD1-202ENST00000411739 STK11IPQ8N1F8 1099 aa14.41□□□□□ -0.1
NEDD1-202ENST00000411739 TRIM34Q9BYJ4 488 aa14.41□□□□□ -0.1
NEDD1-202ENST00000411739 SPDYE5A6NIY4 337 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 TBC1D12O60347 775 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 GDF11O95390 407 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 HLA-DOAP06340 250 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 ERO1BQ86YB8 467 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 DYNLL2Q96FJ2 89 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 FAM227BQ96M60 508 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 OSBPL3Q9H4L5 887 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 RNF186Q9NXI6 227 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 SIPA1L1O43166 1804 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 FOCADQ5VW36 1801 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 MYH1P12882 1939 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 ZFYP08048 801 aaPredicted RBP14.4□□□□□ -0.1
NEDD1-202ENST00000411739 ZBTB48P10074 688 aaPredicted RBP14.4□□□□□ -0.1
NEDD1-202ENST00000411739 LBX1P52954 281 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 ZMYM1Q5SVZ6 1142 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 CCDC136Q96JN2 1154 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 ZHX2Q9Y6X8 837 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 THSD7BQ9C0I4 1608 aa14.4□□□□□ -0.1
NEDD1-202ENST00000411739 UNCXA6NJT0 531 aa14.39□□□□□ -0.11
NEDD1-202ENST00000411739 USP17L12C9JPN9 530 aa14.39□□□□□ -0.11
NEDD1-202ENST00000411739 USP17L21D6R901 530 aa14.39□□□□□ -0.11
NEDD1-202ENST00000411739 FOXP4Q8IVH2 680 aaPredicted RBP14.39□□□□□ -0.11
NEDD1-202ENST00000411739 SCYL3Q8IZE3 742 aa14.39□□□□□ -0.11
NEDD1-202ENST00000411739 SLC44A5Q8NCS7 719 aa14.39□□□□□ -0.11
NEDD1-202ENST00000411739 PTPN18Q99952 460 aa14.39□□□□□ -0.11
NEDD1-202ENST00000411739 PICK1Q9NRD5 415 aa14.39□□□□□ -0.11
NEDD1-202ENST00000411739 GSG1L2A8MUP6 293 aa14.39□□□□□ -0.11
NEDD1-202ENST00000411739 IGF2BP3O00425 579 aaKnown RBP eCLIP14.39□□□□□ -0.11
NEDD1-202ENST00000411739 CTNND1O60716 968 aaKnown RBP14.39□□□□□ -0.11
NEDD1-202ENST00000411739 TBC1D8O95759 1140 aa14.39□□□□□ -0.11
NEDD1-202ENST00000411739 APPP05067 770 aa14.39□□□□□ -0.11
NEDD1-202ENST00000411739 MS4A4AQ96JQ5 239 aa14.39□□□□□ -0.11
NEDD1-202ENST00000411739 HERC5Q9UII4 1024 aaKnown RBP14.39□□□□□ -0.11
NEDD1-202ENST00000411739 COL2A1P02458 1487 aaPredicted RBP14.39□□□□□ -0.11
NEDD1-202ENST00000411739 A0A0D9SFI3 127 aa14.38□□□□□ -0.11
NEDD1-202ENST00000411739 GSPT1P15170 499 aaKnown RBP14.38□□□□□ -0.11
NEDD1-202ENST00000411739 PTPRAP18433 802 aa14.38□□□□□ -0.11
NEDD1-202ENST00000411739 TM4SF4P48230 202 aa14.38□□□□□ -0.11
NEDD1-202ENST00000411739 NMIQ13287 307 aaPredicted RBP14.38□□□□□ -0.11
NEDD1-202ENST00000411739 NOL9Q5SY16 702 aaKnown RBP14.38□□□□□ -0.11
NEDD1-202ENST00000411739 TTC6Q86TZ1 520 aa14.38□□□□□ -0.11
NEDD1-202ENST00000411739 R3HDMLQ9H3Y0 253 aa14.38□□□□□ -0.11
NEDD1-202ENST00000411739 SERPINB13Q9UIV8 391 aa14.38□□□□□ -0.11
NEDD1-202ENST00000411739 BAZ2AQ9UIF9 1905 aaKnown RBP14.38□□□□□ -0.11
NEDD1-202ENST00000411739 CCL15-CCL14A0A0B4J2E2 113 aa14.38□□□□□ -0.11
NEDD1-202ENST00000411739 HSPA8P11142 646 aaKnown RBP14.38□□□□□ -0.11
NEDD1-202ENST00000411739 CAP2P40123 477 aa14.38□□□□□ -0.11
NEDD1-202ENST00000411739 CCL15Q16663 113 aa14.38□□□□□ -0.11
NEDD1-202ENST00000411739 LRRFIP1Q32MZ4 808 aaKnown RBP14.38□□□□□ -0.11
NEDD1-202ENST00000411739 BRI3BPQ8WY22 251 aa14.38□□□□□ -0.11
NEDD1-202ENST00000411739 ATP8A2Q9NTI2 1148 aa14.38□□□□□ -0.11
NEDD1-202ENST00000411739 MANSC4A6NHS7 340 aaPredicted RBP14.37□□□□□ -0.11
NEDD1-202ENST00000411739 PPATQ06203 517 aa14.37□□□□□ -0.11
NEDD1-202ENST00000411739 CTR9Q6PD62 1173 aa14.37□□□□□ -0.11
NEDD1-202ENST00000411739 EPB41L4AQ9HCS5 686 aaPredicted RBP14.37□□□□□ -0.11
NEDD1-202ENST00000411739 TRIM75PA6NK02 468 aa14.37□□□□□ -0.11
NEDD1-202ENST00000411739 MINDY4BA8MYZ0 360 aa14.37□□□□□ -0.11
NEDD1-202ENST00000411739 SREBF2Q12772 1141 aa14.37□□□□□ -0.11
NEDD1-202ENST00000411739 PPIL2Q13356 520 aa14.37□□□□□ -0.11
NEDD1-202ENST00000411739 DGKZQ13574 1117 aa14.37□□□□□ -0.11
NEDD1-202ENST00000411739 TTC22Q5TAA0 569 aa14.37□□□□□ -0.11
NEDD1-202ENST00000411739 VPS53Q5VIR6 699 aa14.37□□□□□ -0.11
NEDD1-202ENST00000411739 CENPQQ7L2Z9 268 aaPredicted RBP14.37□□□□□ -0.11
NEDD1-202ENST00000411739 METTL16Q86W50 562 aaKnown RBP14.37□□□□□ -0.11
NEDD1-202ENST00000411739 IFNL1Q8IU54 200 aa14.37□□□□□ -0.11
NEDD1-202ENST00000411739 NAV1Q8NEY1 1877 aa14.37□□□□□ -0.11
NEDD1-202ENST00000411739 SDSP20132 328 aa14.36□□□□□ -0.11
NEDD1-202ENST00000411739 SHMT1P34896 483 aa14.36□□□□□ -0.11
NEDD1-202ENST00000411739 CTCFP49711 727 aaPredicted RBP14.36□□□□□ -0.11
NEDD1-202ENST00000411739 GTF2A2P52657 109 aa14.36□□□□□ -0.11
NEDD1-202ENST00000411739 C12orf60Q5U649 245 aa14.36□□□□□ -0.11
NEDD1-202ENST00000411739 ZNF589Q86UQ0 364 aaPredicted RBP14.36□□□□□ -0.11
NEDD1-202ENST00000411739 FAM43AQ8N2R8 423 aa14.36□□□□□ -0.11
NEDD1-202ENST00000411739 GH2P01242 217 aa14.35□□□□□ -0.11
NEDD1-202ENST00000411739 TDO2P48775 406 aa14.35□□□□□ -0.11
NEDD1-202ENST00000411739 SNAPC2Q13487 334 aa14.35□□□□□ -0.11
NEDD1-202ENST00000411739 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
NEDD1-202ENST00000411739 IFNL3Q8IZI9 196 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms