RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 GJA8P48165 433 aa9.65□□□□□ -0.86
LSM5-202ENST00000409292 BCAMP50895 628 aa9.65□□□□□ -0.86
LSM5-202ENST00000409292 APOBEC3HQ6NTF7 200 aaKnown RBP9.65□□□□□ -0.86
LSM5-202ENST00000409292 TYW1BQ6NUM6 668 aa9.65□□□□□ -0.86
LSM5-202ENST00000409292 SMCR8Q8TEV9 937 aaPredicted RBP9.65□□□□□ -0.86
LSM5-202ENST00000409292 ARHGAP39Q9C0H5 1083 aa9.65□□□□□ -0.86
LSM5-202ENST00000409292 BICC1Q9H694 974 aaKnown RBP9.65□□□□□ -0.86
LSM5-202ENST00000409292 PCDHGA10Q9Y5H3 936 aa9.65□□□□□ -0.86
LSM5-202ENST00000409292 LRRFIP2Q9Y608 721 aaKnown RBP9.65□□□□□ -0.86
LSM5-202ENST00000409292 OTOFQ9HC10 1997 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 UTYO14607 1347 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 PTPRCP08575 1304 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 A0A1W2PPC1 479 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 DPYSL4O14531 572 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 TNPO2O14787 897 aaKnown RBP9.64□□□□□ -0.87
LSM5-202ENST00000409292 SEMA3EO15041 775 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 FARP2O94887 1054 aaPredicted RBP9.64□□□□□ -0.87
LSM5-202ENST00000409292 TFRCP02786 760 aaKnown RBP9.64□□□□□ -0.87
LSM5-202ENST00000409292 NBPF7P0C2Y1 421 aaPredicted RBP9.64□□□□□ -0.87
LSM5-202ENST00000409292 INPP5BP32019 993 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 TCP10Q12799 353 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 RABL6Q3YEC7 729 aaPredicted RBP9.64□□□□□ -0.87
LSM5-202ENST00000409292 LRRC24Q50LG9 513 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 NOL9Q5SY16 702 aaKnown RBP9.64□□□□□ -0.87
LSM5-202ENST00000409292 COA7Q96BR5 231 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 EPAS1Q99814 870 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 ZBED2Q9BTP6 218 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 USP40Q9NVE5 1235 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 CEP126Q9P2H0 1117 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 KCNH4Q9UQ05 1017 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 ARAP2Q8WZ64 1704 aa9.64□□□□□ -0.87
LSM5-202ENST00000409292 A0A1B0GUL6 1792 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 AK9Q5TCS8 1911 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 EYA2O00167 538 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 ADCY3O60266 1144 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 PABPC4Q13310 644 aaKnown RBP eCLIP9.63□□□□□ -0.877e-10■□□□□ 11.1
LSM5-202ENST00000409292 MTFR1Q15390 333 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 SPTY2D1Q68D10 685 aaPredicted RBP9.63□□□□□ -0.87
LSM5-202ENST00000409292 GADL1Q6ZQY3 521 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 U2AF1L4Q8WU68 220 aaKnown RBP9.63□□□□□ -0.87
LSM5-202ENST00000409292 WDR70Q9NW82 654 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 ZNF112Q9UJU3 913 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 DENND2AQ9ULE3 1009 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 SLC45A1Q9Y2W3 748 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 CEP290O15078 2479 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 TRIOBPQ9H2D6 2365 aa9.63□□□□□ -0.87
LSM5-202ENST00000409292 PPP1R3GB7ZBB8 358 aa9.62□□□□□ -0.87
LSM5-202ENST00000409292 ENTPD3O75355 529 aa9.62□□□□□ -0.87
LSM5-202ENST00000409292 SGPL1O95470 568 aa9.62□□□□□ -0.87
LSM5-202ENST00000409292 PRKCZQ05513 592 aa9.62□□□□□ -0.87
LSM5-202ENST00000409292 GRIK5Q16478 980 aa9.62□□□□□ -0.87
LSM5-202ENST00000409292 ATP2B3Q16720 1220 aa9.62□□□□□ -0.87
LSM5-202ENST00000409292 CDC42EP5Q6NZY7 148 aa9.62□□□□□ -0.87
LSM5-202ENST00000409292 DZIP1Q86YF9 867 aaKnown RBP9.62□□□□□ -0.87
LSM5-202ENST00000409292 SCYL3Q8IZE3 742 aa9.62□□□□□ -0.87
LSM5-202ENST00000409292 PXYLP1Q8TE99 480 aa9.62□□□□□ -0.87
LSM5-202ENST00000409292 DAGLAQ9Y4D2 1042 aa9.62□□□□□ -0.87
LSM5-202ENST00000409292 ZHX2Q9Y6X8 837 aa9.62□□□□□ -0.87
LSM5-202ENST00000409292 UBTFL1P0CB47 393 aaPredicted RBP9.61□□□□□ -0.87
LSM5-202ENST00000409292 CAP1Q01518 475 aa9.61□□□□□ -0.87
LSM5-202ENST00000409292 VGLL2Q8N8G2 317 aa9.61□□□□□ -0.87
LSM5-202ENST00000409292 SLC17A8Q8NDX2 589 aa9.61□□□□□ -0.87
LSM5-202ENST00000409292 KCTD12Q96CX2 325 aaKnown RBP9.61□□□□□ -0.87
LSM5-202ENST00000409292 KAZALD1Q96I82 304 aa9.61□□□□□ -0.87
LSM5-202ENST00000409292 NBPF3Q9H094 633 aa9.61□□□□□ -0.87
LSM5-202ENST00000409292 RBM27Q9P2N5 1060 aaKnown RBP9.61□□□□□ -0.87
LSM5-202ENST00000409292 SPDYE16A6NNV3 312 aaPredicted RBP9.6□□□□□ -0.87
LSM5-202ENST00000409292 BHMG1C9JSJ3 638 aaPredicted RBP9.6□□□□□ -0.87
LSM5-202ENST00000409292 CTNND1O60716 968 aaKnown RBP9.6□□□□□ -0.87
LSM5-202ENST00000409292 CIAO1O76071 339 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 CYP2C8P10632 490 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 BCRP11274 1271 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 FGFR2P21802 821 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 FLT3LGP49771 235 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 IRF5Q13568 498 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 DIXDC1Q155Q3 683 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 CCDC184Q52MB2 194 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 NECAB2Q7Z6G3 386 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 FAM9BQ8IZU0 186 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 ANKRD44Q8N8A2 993 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 SHISA4Q96DD7 197 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 TBC1D2Q9BYX2 928 aa9.6□□□□□ -0.87
LSM5-202ENST00000409292 ADGRA2Q96PE1 1338 aa9.59□□□□□ -0.87
LSM5-202ENST00000409292 SALL1Q9NSC2 1324 aa9.59□□□□□ -0.87
LSM5-202ENST00000409292 A0A0G2JLL6 359 aaPredicted RBP9.59□□□□□ -0.87
LSM5-202ENST00000409292 ZBTB7BO15156 539 aaPredicted RBP9.59□□□□□ -0.87
LSM5-202ENST00000409292 MAP4K4O95819 1239 aaPredicted RBP9.59□□□□□ -0.87
LSM5-202ENST00000409292 INHAP05111 366 aa9.59□□□□□ -0.87
LSM5-202ENST00000409292 LDHCP07864 332 aa9.59□□□□□ -0.87
LSM5-202ENST00000409292 PTPRAP18433 802 aa9.59□□□□□ -0.87
LSM5-202ENST00000409292 PRDX5P30044 214 aa9.59□□□□□ -0.87
LSM5-202ENST00000409292 IL15P40933 162 aaPredicted RBP9.59□□□□□ -0.87
LSM5-202ENST00000409292 GCLCP48506 637 aaPredicted RBP9.59□□□□□ -0.87
LSM5-202ENST00000409292 RGS3P49796 1198 aa9.59□□□□□ -0.87
LSM5-202ENST00000409292 GSTO1P78417 241 aa9.59□□□□□ -0.87
LSM5-202ENST00000409292 NFIAQ12857 509 aa9.59□□□□□ -0.87
LSM5-202ENST00000409292 E2F4Q16254 413 aa9.59□□□□□ -0.87
LSM5-202ENST00000409292 PRRT2Q7Z6L0 340 aaPredicted RBP9.59□□□□□ -0.87
LSM5-202ENST00000409292 CCAR1Q8IX12 1150 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms