RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 LRRC26Q2I0M4 334 aa16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 FAM196BA6NMK8 535 aa16.08■□□□□ 0.16
CHRNA1-203ENST00000409219 EYA2O00167 538 aa16.08■□□□□ 0.16
CHRNA1-203ENST00000409219 WDR63Q8IWG1 891 aa16.08■□□□□ 0.16
CHRNA1-203ENST00000409219 ASCC2Q9H1I8 757 aaPredicted RBP16.08■□□□□ 0.16
CHRNA1-203ENST00000409219 LTBP2Q14767 1821 aa16.08■□□□□ 0.16
CHRNA1-203ENST00000409219 CYP2B6P20813 491 aa16.07■□□□□ 0.16
CHRNA1-203ENST00000409219 RFX5P48382 616 aaPredicted RBP16.07■□□□□ 0.16
CHRNA1-203ENST00000409219 HMGCS2P54868 508 aa16.07■□□□□ 0.16
CHRNA1-203ENST00000409219 SPP2Q13103 211 aa16.07■□□□□ 0.16
CHRNA1-203ENST00000409219 PICALMQ13492 652 aa16.07■□□□□ 0.16
CHRNA1-203ENST00000409219 ATG9AQ7Z3C6 839 aa16.07■□□□□ 0.16
CHRNA1-203ENST00000409219 MORF4L1Q9UBU8 362 aa16.07■□□□□ 0.16
CHRNA1-203ENST00000409219 ZNF280CQ8ND82 737 aa16.06■□□□□ 0.16
CHRNA1-203ENST00000409219 PRDM6Q9NQX0 595 aa16.06■□□□□ 0.16
CHRNA1-203ENST00000409219 SALL2Q9Y467 1007 aaPredicted RBP16.06■□□□□ 0.16
CHRNA1-203ENST00000409219 TTC28Q96AY4 2481 aa16.06■□□□□ 0.16
CHRNA1-203ENST00000409219 PHKA1P46020 1223 aa16.05■□□□□ 0.16
CHRNA1-203ENST00000409219 PABPC4Q13310 644 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHRNA1-203ENST00000409219 ZNF697Q5TEC3 545 aa16.05■□□□□ 0.16
CHRNA1-203ENST00000409219 SOCS4Q8WXH5 440 aa16.05■□□□□ 0.16
CHRNA1-203ENST00000409219 DENND2AQ9ULE3 1009 aa16.05■□□□□ 0.16
CHRNA1-203ENST00000409219 TBC1D12O60347 775 aa16.04■□□□□ 0.16
CHRNA1-203ENST00000409219 PEX10O60683 326 aa16.04■□□□□ 0.16
CHRNA1-203ENST00000409219 XRCC5P13010 732 aaKnown RBP16.04■□□□□ 0.16
CHRNA1-203ENST00000409219 CCND3P30281 292 aaPredicted RBP16.04■□□□□ 0.16
CHRNA1-203ENST00000409219 BTDP43251 543 aa16.04■□□□□ 0.16
CHRNA1-203ENST00000409219 CACNB2Q08289 660 aaPredicted RBP16.04■□□□□ 0.16
CHRNA1-203ENST00000409219 ATP2B3Q16720 1220 aa16.04■□□□□ 0.16
CHRNA1-203ENST00000409219 LHX8Q68G74 356 aa16.04■□□□□ 0.16
CHRNA1-203ENST00000409219 OSBPL5Q9H0X9 879 aaPredicted RBP16.04■□□□□ 0.16
CHRNA1-203ENST00000409219 GNL3LQ9NVN8 582 aaKnown RBP16.04■□□□□ 0.16
CHRNA1-203ENST00000409219 SEMA3EO15041 775 aa16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 SH3D19Q5HYK7 790 aa16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 DZIP1Q86YF9 867 aaKnown RBP16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 NUDT12Q9BQG2 462 aa16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 TBC1D2Q9BYX2 928 aa16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 SIPA1L1O43166 1804 aa16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 MROH7-TTC4A0A0A0MT08 1334 aa16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 RHBDL3P58872 404 aa16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 RRP1BQ14684 758 aaKnown RBP16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 ZGPATQ8N5A5 531 aaKnown RBP16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 MAFAQ8NHW3 353 aaPredicted RBP16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 CDX2Q99626 313 aaPredicted RBP16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 USP44Q9H0E7 712 aa16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 TXNRD2Q9NNW7 524 aa16.03■□□□□ 0.16
CHRNA1-203ENST00000409219 CCL14Q16627 93 aa16.02■□□□□ 0.15
CHRNA1-203ENST00000409219 USP6NLQ92738 828 aa16.02■□□□□ 0.15
CHRNA1-203ENST00000409219 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.15
CHRNA1-203ENST00000409219 LBHD1Q9BQE6 289 aaPredicted RBP16.02■□□□□ 0.15
CHRNA1-203ENST00000409219 SIL1Q9H173 461 aa16.02■□□□□ 0.15
CHRNA1-203ENST00000409219 USP17L5A8MUK1 530 aa16.01■□□□□ 0.15
CHRNA1-203ENST00000409219 ZBTB22O15209 634 aa16.01■□□□□ 0.15
CHRNA1-203ENST00000409219 ADORA1P30542 326 aa16.01■□□□□ 0.15
CHRNA1-203ENST00000409219 CAP2P40123 477 aa16.01■□□□□ 0.15
CHRNA1-203ENST00000409219 IRX3P78415 501 aaPredicted RBP16.01■□□□□ 0.15
CHRNA1-203ENST00000409219 RASGRF1Q13972 1273 aa16.01■□□□□ 0.15
CHRNA1-203ENST00000409219 TRMT44Q8IYL2 757 aaKnown RBP16.01■□□□□ 0.15
CHRNA1-203ENST00000409219 ABCF2Q9UG63 623 aa16.01■□□□□ 0.15
CHRNA1-203ENST00000409219 HERVK_113P62684 666 aa16■□□□□ 0.15
CHRNA1-203ENST00000409219 PDE3AQ14432 1141 aa16■□□□□ 0.15
CHRNA1-203ENST00000409219 CCDC102BQ68D86 513 aa16■□□□□ 0.15
CHRNA1-203ENST00000409219 SLF2Q8IX21 1173 aa16■□□□□ 0.15
CHRNA1-203ENST00000409219 ZNF384Q8TF68 577 aa16■□□□□ 0.15
CHRNA1-203ENST00000409219 PORCNQ9H237 461 aa16■□□□□ 0.15
CHRNA1-203ENST00000409219 GPR75-ASB3A0A0A6YYF3 556 aa15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 NPM3O75607 178 aaKnown RBP15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 CIAO1O76071 339 aa15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 HOXA7P31268 230 aaPredicted RBP15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 MTMR2Q13614 643 aa15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 P2RX7Q99572 595 aaKnown RBP15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 APBA2Q99767 749 aa15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 SENP6Q9GZR1 1112 aaPredicted RBP15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 AS3MTQ9HBK9 375 aa15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 CEP126Q9P2H0 1117 aa15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 FBXO3Q9UK99 471 aa15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 PDS5AQ29RF7 1337 aaKnown RBP15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 RLFQ13129 1914 aa15.99■□□□□ 0.15
CHRNA1-203ENST00000409219 MAPK4P31152 587 aa15.98■□□□□ 0.15
CHRNA1-203ENST00000409219 RGS2P41220 211 aa15.98■□□□□ 0.15
CHRNA1-203ENST00000409219 MECOMQ03112 1051 aa15.98■□□□□ 0.15
CHRNA1-203ENST00000409219 MORN1Q5T089 497 aa15.98■□□□□ 0.15
CHRNA1-203ENST00000409219 GPR142Q7Z601 462 aa15.98■□□□□ 0.15
CHRNA1-203ENST00000409219 GPRC5AQ8NFJ5 357 aa15.98■□□□□ 0.15
CHRNA1-203ENST00000409219 MYLIPQ8WY64 445 aa15.98■□□□□ 0.15
CHRNA1-203ENST00000409219 SEMA6BQ9H3T3 888 aa15.98■□□□□ 0.15
CHRNA1-203ENST00000409219 ATN1P54259 1190 aaPredicted RBP15.97■□□□□ 0.15
CHRNA1-203ENST00000409219 BACE1P56817 501 aa15.97■□□□□ 0.15
CHRNA1-203ENST00000409219 ERVK-9P63128 1117 aa15.97■□□□□ 0.15
CHRNA1-203ENST00000409219 ERVK-24P63145 666 aa15.97■□□□□ 0.15
CHRNA1-203ENST00000409219 MRPL50Q8N5N7 158 aaKnown RBP15.97■□□□□ 0.15
CHRNA1-203ENST00000409219 TTYH1Q9H313 450 aaPredicted RBP15.97■□□□□ 0.15
CHRNA1-203ENST00000409219 RBPJLQ9UBG7 517 aa15.97■□□□□ 0.15
CHRNA1-203ENST00000409219 PTPRCP08575 1304 aa15.97■□□□□ 0.15
CHRNA1-203ENST00000409219 SHHQ15465 462 aa15.97■□□□□ 0.15
CHRNA1-203ENST00000409219 Q3C1V9 767 aa15.97■□□□□ 0.15
CHRNA1-203ENST00000409219 C9orf50Q5SZB4 431 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms