RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
SNORD88A-201ENST00000408314 PRRT2Q7Z6L0 340 aaPredicted RBP11.04□□□□□ -0.64
SNORD88A-201ENST00000408314 NBPF11Q86T75 865 aa11.04□□□□□ -0.64
SNORD88A-201ENST00000408314 FOXP4Q8IVH2 680 aaPredicted RBP11.04□□□□□ -0.64
SNORD88A-201ENST00000408314 IL1RAPL2Q9NP60 686 aa11.04□□□□□ -0.64
SNORD88A-201ENST00000408314 FLT1P17948 1338 aa11.04□□□□□ -0.64
SNORD88A-201ENST00000408314 ASNSP08243 561 aa11.03□□□□□ -0.64
SNORD88A-201ENST00000408314 USP5P45974 858 aa11.03□□□□□ -0.64
SNORD88A-201ENST00000408314 SOX10P56693 466 aa11.03□□□□□ -0.64
SNORD88A-201ENST00000408314 LACTBP83111 547 aaPredicted RBP11.03□□□□□ -0.64
SNORD88A-201ENST00000408314 MAGEB6Q8N7X4 407 aa11.03□□□□□ -0.64
SNORD88A-201ENST00000408314 PROCA1Q8NCQ7 364 aaPredicted RBP11.03□□□□□ -0.64
SNORD88A-201ENST00000408314 TGFBRAP1Q8WUH2 860 aa11.03□□□□□ -0.64
SNORD88A-201ENST00000408314 PIH1D3Q9NQM4 214 aaKnown RBP11.03□□□□□ -0.64
SNORD88A-201ENST00000408314 AFG3L2Q9Y4W6 797 aa11.03□□□□□ -0.64
SNORD88A-201ENST00000408314 USP17L5A8MUK1 530 aa11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 APBB1O00213 710 aa11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 CAP2P40123 477 aa11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 GADL1Q6ZQY3 521 aa11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 TTC6Q86TZ1 520 aa11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 MAPKAPK5Q8IW41 473 aa11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 SMCR8Q8TEV9 937 aaPredicted RBP11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 GPATCH3Q96I76 525 aa11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 LRRCC1Q9C099 1032 aa11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 FOCADQ5VW36 1801 aa11.02□□□□□ -0.65
SNORD88A-201ENST00000408314 TRIM75PA6NK02 468 aa11.01□□□□□ -0.65
SNORD88A-201ENST00000408314 SLC9C1Q4G0N8 1177 aa11.01□□□□□ -0.65
SNORD88A-201ENST00000408314 C17orf99Q6UX52 265 aa11.01□□□□□ -0.65
SNORD88A-201ENST00000408314 ADGRA1Q86SQ6 560 aa11.01□□□□□ -0.65
SNORD88A-201ENST00000408314 ZNF280CQ8ND82 737 aa11.01□□□□□ -0.65
SNORD88A-201ENST00000408314 ARMC5Q96C12 935 aa11.01□□□□□ -0.65
SNORD88A-201ENST00000408314 DNAJC2Q99543 621 aaKnown RBP11.01□□□□□ -0.65
SNORD88A-201ENST00000408314 TMEM106CQ9BVX2 250 aa11.01□□□□□ -0.65
SNORD88A-201ENST00000408314 CRNKL1Q9BZJ0 848 aaKnown RBP11.01□□□□□ -0.65
SNORD88A-201ENST00000408314 EHD4Q9H223 541 aa11.01□□□□□ -0.65
SNORD88A-201ENST00000408314 AGTPBP1Q9UPW5 1226 aa11.01□□□□□ -0.65
SNORD88A-201ENST00000408314 MAGEB6P1A0A0J9YX57 407 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 ATP5JP18859 108 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 FCGRTP55899 365 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 MOGSQ13724 837 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 SLC9C2Q5TAH2 1124 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 ZSCAN25Q6NSZ9 544 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 METTL16Q86W50 562 aaKnown RBP11□□□□□ -0.65
SNORD88A-201ENST00000408314 SIRT2Q8IXJ6 389 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 AMOTL1Q8IY63 956 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 DDRGK1Q96HY6 314 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 PAG1Q9NWQ8 432 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 TMOD4Q9NZQ9 345 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 CPA4Q9UI42 421 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 SERPINB13Q9UIV8 391 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 ADGRA2Q96PE1 1338 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 ATAD5Q96QE3 1844 aa11□□□□□ -0.65
SNORD88A-201ENST00000408314 FAM196BA6NMK8 535 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 C19orf81C9J6K1 198 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 GOLIM4O00461 696 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 FMNL1O95466 1100 aaPredicted RBP10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 OSBPP22059 807 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 PSMC4P43686 418 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 GCLCP48506 637 aaPredicted RBP10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 SPP2Q13103 211 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 GPAT2Q6NUI2 795 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 MIGA1Q8NAN2 632 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 WDR18Q9BV38 432 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 PALD1Q9ULE6 856 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 CDK5RAP2Q96SN8 1893 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 PTPRFP10586 1907 aa10.99□□□□□ -0.65
SNORD88A-201ENST00000408314 RBBP6Q7Z6E9 1792 aaKnown RBP10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 PHIPQ8WWQ0 1821 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 MYO5AQ9Y4I1 1855 aaKnown RBP10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 POLR3DP05423 398 aaPredicted RBP10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 BCRP11274 1271 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 PDE6AP16499 860 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 DYNLL1P63167 89 aaKnown RBP10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 LRRFIP1Q32MZ4 808 aaKnown RBP10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 SH3D19Q5HYK7 790 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 RAET1EQ8TD07 263 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 GTF3C2Q8WUA4 911 aaPredicted RBP10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 HAUS7Q99871 368 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 ANTXR1Q9H6X2 564 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 CABP5Q9NP86 173 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 ZBTB47Q9UFB7 747 aaPredicted RBP10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 SRRDQ9UH36 339 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 SAP30BPQ9UHR5 308 aaKnown RBP10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 ZBTB21Q9ULJ3 1066 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 PTCH2Q9Y6C5 1203 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 LOC285556D6RIA3 1793 aa10.98□□□□□ -0.65
SNORD88A-201ENST00000408314 MYH1P12882 1939 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 CYP2C8P10632 490 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 USP14P54578 494 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 HMGCS2P54868 508 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 IRX3P78415 501 aaPredicted RBP10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 FAM110CQ1W6H9 321 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 C20orf194Q5TEA3 1177 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 ZNF333Q96JL9 665 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 TRIM47Q96LD4 638 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 RIOK1Q9BRS2 568 aaKnown RBP10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 BCL11AQ9H165 835 aa10.97□□□□□ -0.65
SNORD88A-201ENST00000408314 ATP8A2Q9NTI2 1148 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms