RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 C8orf74Q6P047 294 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 JAG2Q9Y219 1238 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 CCDC170Q8IYT3 715 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 RAB3IPQ96QF0 476 aaPredicted RBP13.41□□□□□ -0.26
SMCR8-201ENST00000406438 DEXIO95424 95 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 PDE4DQ08499 809 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 ZNF174Q15697 407 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 AFG3L2Q9Y4W6 797 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 CD2APQ9Y5K6 639 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 URB2Q14146 1524 aaKnown RBP13.41□□□□□ -0.26
SMCR8-201ENST00000406438 UHRF1BP1LA0JNW5 1464 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 PUM3Q15397 648 aaKnown RBP13.41□□□□□ -0.26
SMCR8-201ENST00000406438 SPOUT1Q5T280 376 aaKnown RBP13.41□□□□□ -0.26
SMCR8-201ENST00000406438 ARHGAP24Q8N264 748 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 DNM2P50570 870 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 NAA25Q14CX7 972 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 DCUN1D2Q6PH85 259 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 GBP7Q8N8V2 638 aaPredicted RBP13.4□□□□□ -0.26
SMCR8-201ENST00000406438 MAST3O60307 1309 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 P4HA1P13674 534 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 SH2D4BQ5SQS7 431 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 SYT10Q6XYQ8 523 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 SYCE1Q8N0S2 351 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 AFAP1L1Q8TED9 768 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 NAPGQ99747 312 aaPredicted RBP13.4□□□□□ -0.26
SMCR8-201ENST00000406438 PA2G4Q9UQ80 394 aaKnown RBP13.4□□□□□ -0.26
SMCR8-201ENST00000406438 ZKSCAN5Q9Y2L8 839 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 MUM1L1Q5H9M0 696 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 UTP14CQ5TAP6 766 aaKnown RBP13.4□□□□□ -0.26
SMCR8-201ENST00000406438 IGSF22Q8N9C0 903 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 LINS1Q8NG48 757 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 ARHGEF2Q92974 986 aaKnown RBP13.4□□□□□ -0.26
SMCR8-201ENST00000406438 SOS1Q07889 1333 aaPredicted RBP13.4□□□□□ -0.26
SMCR8-201ENST00000406438 PPP2R5DQ14738 602 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 CALCRLQ16602 461 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 GBP6Q6ZN66 633 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 MRPL44Q9H9J2 332 aaKnown RBP13.4□□□□□ -0.26
SMCR8-201ENST00000406438 CNBD1Q8NA66 436 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 GCNT3O95395 438 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 PPP2R5CQ13362 524 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 SLC9C1Q4G0N8 1177 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 MCUR1Q96AQ8 359 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 TRPM2O94759 1503 aa13.4□□□□□ -0.26
SMCR8-201ENST00000406438 ZNF131P52739 623 aa13.4□□□□□ -0.27
SMCR8-201ENST00000406438 HS1BP3Q53T59 392 aa13.4□□□□□ -0.27
SMCR8-201ENST00000406438 CROCCP2Q86T23 111 aa13.4□□□□□ -0.27
SMCR8-201ENST00000406438 A0A1B0GVL5 298 aa13.39□□□□□ -0.27
SMCR8-201ENST00000406438 GINS2Q9Y248 185 aa13.39□□□□□ -0.27
SMCR8-201ENST00000406438 PCK1P35558 622 aa13.39□□□□□ -0.27
SMCR8-201ENST00000406438 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
SMCR8-201ENST00000406438 LLPHQ9BRT6 129 aaKnown RBP13.39□□□□□ -0.27
SMCR8-201ENST00000406438 TTLL3Q9Y4R7 772 aa13.39□□□□□ -0.27
SMCR8-201ENST00000406438 NCAPGQ9BPX3 1015 aa13.39□□□□□ -0.27
SMCR8-201ENST00000406438 TMEM87BQ96K49 555 aa13.39□□□□□ -0.27
SMCR8-201ENST00000406438 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
SMCR8-201ENST00000406438 FLT4P35916 1363 aa13.39□□□□□ -0.27
SMCR8-201ENST00000406438 FCHSD1Q86WN1 690 aa13.39□□□□□ -0.27
SMCR8-201ENST00000406438 PLCB4Q15147 1175 aa13.39□□□□□ -0.27
SMCR8-201ENST00000406438 LZTS2Q9BRK4 669 aa13.39□□□□□ -0.27
SMCR8-201ENST00000406438 DENND2CQ68D51 928 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 PHLDB2Q86SQ0 1253 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 HELBQ8NG08 1087 aaPredicted RBP13.38□□□□□ -0.27
SMCR8-201ENST00000406438 USH1CQ9Y6N9 552 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 GNPATO15228 680 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 GIGYF1O75420 1035 aaPredicted RBP13.38□□□□□ -0.27
SMCR8-201ENST00000406438 MYCLP12524 364 aaPredicted RBP13.38□□□□□ -0.27
SMCR8-201ENST00000406438 DNM3Q9UQ16 869 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 RAD50Q92878 1312 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 TTF2Q9UNY4 1162 aaKnown RBP13.38□□□□□ -0.27
SMCR8-201ENST00000406438 CPSF2Q9P2I0 782 aaKnown RBP13.38□□□□□ -0.27
SMCR8-201ENST00000406438 SYCP2Q9BX26 1530 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 PRPF6O94906 941 aaKnown RBP13.38□□□□□ -0.27
SMCR8-201ENST00000406438 KIF11P52732 1056 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 MRRFQ96E11 262 aaKnown RBP13.38□□□□□ -0.27
SMCR8-201ENST00000406438 SLC12A2P55011 1212 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 LMNTD2Q8IXW0 634 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 CSGALNACT2Q8N6G5 542 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 FAM114A2Q9NRY5 505 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 MBD4O95243 580 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 FAM160A1Q05DH4 1040 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 VPS16Q9H269 839 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 ASIC3Q9UHC3 531 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 WWC3Q9ULE0 1092 aa13.38□□□□□ -0.27
SMCR8-201ENST00000406438 ANGEL1Q9UNK9 670 aaKnown RBP13.38□□□□□ -0.27
SMCR8-201ENST00000406438 IBTKQ9P2D0 1353 aaPredicted RBP13.37□□□□□ -0.27
SMCR8-201ENST00000406438 RUFY4Q6ZNE9 571 aa13.37□□□□□ -0.27
SMCR8-201ENST00000406438 BUB1BO60566 1050 aaPredicted RBP13.37□□□□□ -0.27
SMCR8-201ENST00000406438 TBC1D8O95759 1140 aa13.37□□□□□ -0.27
SMCR8-201ENST00000406438 PAK1Q13153 545 aa13.37□□□□□ -0.27
SMCR8-201ENST00000406438 PSMD6Q15008 389 aa13.37□□□□□ -0.27
SMCR8-201ENST00000406438 NPATQ14207 1427 aa13.37□□□□□ -0.27
SMCR8-201ENST00000406438 FLOT1O75955 427 aa13.37□□□□□ -0.27
SMCR8-201ENST00000406438 EIF6P56537 245 aaKnown RBP13.37□□□□□ -0.27
SMCR8-201ENST00000406438 DCAF5Q96JK2 942 aa13.37□□□□□ -0.27
SMCR8-201ENST00000406438 UFL1O94874 794 aa13.37□□□□□ -0.27
SMCR8-201ENST00000406438 MYCT1Q8N699 235 aa13.37□□□□□ -0.27
SMCR8-201ENST00000406438 RPS6KB1P23443 525 aa13.37□□□□□ -0.27
SMCR8-201ENST00000406438 EVCP57679 992 aa13.37□□□□□ -0.27
SMCR8-201ENST00000406438 RNASE9P60153 205 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms