RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ETF1P62495 437 aaKnown RBP5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 SERINC3Q13530 473 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 RAB33AQ14088 237 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 ZYXQ15942 572 aaKnown RBP5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 NUTM2GQ5VZR2 741 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 SCARA3Q6AZY7 606 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 DYMQ7RTS9 669 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 DISC1Q9NRI5 854 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 ACTR10Q9NZ32 417 aa5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 CDK11AQ9UQ88 783 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 R3HCC1Q9Y3T6 440 aaKnown RBP5.89□□□□□ -1.47
HMGB1P17-201ENST00000403495 FAM221BA6H8Z2 402 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 SLC22A31A6NKX4 558 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 ACRP10323 421 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 ADH5P11766 374 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 NTF4P34130 210 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 TTLL4Q14679 1199 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 NKG7Q16617 165 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 ARSHQ5FYA8 562 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 ZBTB37Q5TC79 503 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 C12orf50Q8NA57 414 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 ACSF2Q96CM8 615 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 FANCD2OSQ96PS1 177 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 SRPK1Q96SB4 655 aaKnown RBP5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 LGR6Q9HBX8 967 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 CRIM1Q9NZV1 1036 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 MKL2Q9ULH7 1088 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 PRR36Q9H6K5 1346 aa5.88□□□□□ -1.47
HMGB1P17-201ENST00000403495 A0A1W2PQH9 124 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 RNGTTO60942 597 aaKnown RBP5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 RING1Q06587 406 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 TTC6Q86TZ1 520 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 JAZF1Q86VZ6 243 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 RBBP8NLQ8NC74 664 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 XAGE3Q8WTP9 111 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 TMEM40Q8WWA1 233 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 ATG4CQ96DT6 458 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 WNT10AQ9GZT5 417 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 RNF208Q9H0X6 261 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 FAM86C1Q9NVL1 165 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 TJP2Q9UDY2 1190 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 PCDHB10Q9UN67 800 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 ACTL7BQ9Y614 415 aa5.87□□□□□ -1.47
HMGB1P17-201ENST00000403495 F8W735 103 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 U2SURPO15042 1029 aaKnown RBP5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 EIF4EBP3O60516 100 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 IMPDH2P12268 514 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 ELNP15502 786 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 COL8A1P27658 744 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 PREPP48147 710 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 ERVK-24P63145 666 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 SOX4Q06945 474 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 TNNI3KQ59H18 835 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 HP1BP3Q5SSJ5 553 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 SOGA3Q5TF21 947 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 FDX2Q6P4F2 183 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 IGF2-ASQ6U949 168 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 FAM13CQ8NE31 585 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 ISL2Q96A47 359 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 SLC9A7Q96T83 725 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 MRPL18Q9H0U6 180 aaKnown RBP5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 FAM105AQ9NUU6 356 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 SNTG2Q9NY99 539 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 GMIPQ9P107 970 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 STK17AQ9UEE5 414 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 USP21Q9UK80 565 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 ADAMTS8Q9UP79 889 aa5.86□□□□□ -1.47
HMGB1P17-201ENST00000403495 LTBP3Q9NS15 1303 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 MEGF11A6BM72 1044 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 MEIS3P2A8K0S8 358 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 NME1P15531 152 aaKnown RBP5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 GLB1P16278 677 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 RAB6AP20340 208 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 GUCY2CP25092 1073 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 ASPAP45381 313 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 PDE4BQ07343 736 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 RASA3Q14644 834 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 DDR2Q16832 855 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 PRRT3Q5FWE3 981 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 C6orf15Q6UXA7 325 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 NLRC3Q7RTR2 1065 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 ZSCAN1Q8NBB4 408 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 C2CD4AQ8NCU7 369 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 SMG8Q8ND04 991 aaKnown RBP5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 DEPDC7Q96QD5 511 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 CYP4F12Q9HCS2 524 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 SIRPGQ9P1W8 387 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 MAPK8IP1Q9UQF2 711 aa5.85□□□□□ -1.47
HMGB1P17-201ENST00000403495 SPDYE3A6NKU9 549 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 WIPF1O43516 503 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 DDAH1O94760 285 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 TIAF1O95411 115 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 GJB6O95452 261 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 TMEM201Q5SNT2 666 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 NBPF6Q5VWK0 638 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 ZNF746Q6NUN9 644 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 UNC5AQ6ZN44 842 aa5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 NOP9Q86U38 636 aaKnown RBP5.84□□□□□ -1.47
HMGB1P17-201ENST00000403495 NLGN1Q8N2Q7 840 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms