RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 COA7Q96BR5 231 aa14.88□□□□□ -0.03
SPTLC1P3-201ENST00000403408 OGDHLQ9ULD0 1010 aa14.88□□□□□ -0.03
SPTLC1P3-201ENST00000403408 LRRFIP2Q9Y608 721 aaKnown RBP14.88□□□□□ -0.03
SPTLC1P3-201ENST00000403408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.88□□□□□ -0.03
SPTLC1P3-201ENST00000403408 ATAD5Q96QE3 1844 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 CAPN2P17655 700 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 JAG1P78504 1218 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 SPP2Q13103 211 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 PICALMQ13492 652 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 RASGRF1Q13972 1273 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 MAP3K21Q5TCX8 1036 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 POTEEQ6S8J3 1075 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 TDHQ8IZJ6 230 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 FAM163AQ96GL9 167 aaPredicted RBP14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 NBPF3Q9H094 633 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 C11orf49Q9H6J7 331 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 MRS2Q9HD23 443 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 PA2G4Q9UQ80 394 aaKnown RBP14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 RPTORQ8N122 1335 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 ZNF521Q96K83 1311 aa14.87□□□□□ -0.03
SPTLC1P3-201ENST00000403408 COL6A1P12109 1028 aa14.86□□□□□ -0.03
SPTLC1P3-201ENST00000403408 BTDP43251 543 aa14.86□□□□□ -0.03
SPTLC1P3-201ENST00000403408 HMGCS2P54868 508 aa14.86□□□□□ -0.03
SPTLC1P3-201ENST00000403408 SHROOM1Q2M3G4 852 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1P3-201ENST00000403408 CCDC102BQ68D86 513 aa14.86□□□□□ -0.03
SPTLC1P3-201ENST00000403408 ZSCAN29Q8IWY8 852 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1P3-201ENST00000403408 SSH1Q8WYL5 1049 aa14.86□□□□□ -0.03
SPTLC1P3-201ENST00000403408 ASCC2Q9H1I8 757 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1P3-201ENST00000403408 SIPA1L1O43166 1804 aa14.86□□□□□ -0.03
SPTLC1P3-201ENST00000403408 ZBTB22O15209 634 aa14.85□□□□□ -0.03
SPTLC1P3-201ENST00000403408 PROCA1Q8NCQ7 364 aaPredicted RBP14.85□□□□□ -0.03
SPTLC1P3-201ENST00000403408 GUCD1Q96NT3 240 aa14.85□□□□□ -0.03
SPTLC1P3-201ENST00000403408 TXNRD2Q9NNW7 524 aa14.85□□□□□ -0.03
SPTLC1P3-201ENST00000403408 DENND2AQ9ULE3 1009 aa14.85□□□□□ -0.03
SPTLC1P3-201ENST00000403408 GPR75-ASB3A0A0A6YYF3 556 aa14.84□□□□□ -0.03
SPTLC1P3-201ENST00000403408 TBC1D12O60347 775 aa14.84□□□□□ -0.03
SPTLC1P3-201ENST00000403408 CIAO1O76071 339 aa14.84□□□□□ -0.03
SPTLC1P3-201ENST00000403408 CYP2B6P20813 491 aa14.84□□□□□ -0.03
SPTLC1P3-201ENST00000403408 TIMM10P62072 90 aa14.84□□□□□ -0.03
SPTLC1P3-201ENST00000403408 LRRC26Q2I0M4 334 aa14.84□□□□□ -0.03
SPTLC1P3-201ENST00000403408 LHX8Q68G74 356 aa14.84□□□□□ -0.03
SPTLC1P3-201ENST00000403408 HMX1Q9NP08 348 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1P3-201ENST00000403408 MORF4L1Q9UBU8 362 aa14.84□□□□□ -0.03
SPTLC1P3-201ENST00000403408 MROH7-TTC4A0A0A0MT08 1334 aa14.84□□□□□ -0.03
SPTLC1P3-201ENST00000403408 COL2A1P02458 1487 aaPredicted RBP14.83□□□□□ -0.03
SPTLC1P3-201ENST00000403408 SEMA3EO15041 775 aa14.83□□□□□ -0.04
SPTLC1P3-201ENST00000403408 PRKAR2AP13861 404 aaKnown RBP14.83□□□□□ -0.04
SPTLC1P3-201ENST00000403408 MECOMQ03112 1051 aa14.83□□□□□ -0.04
SPTLC1P3-201ENST00000403408 SH3D19Q5HYK7 790 aa14.83□□□□□ -0.04
SPTLC1P3-201ENST00000403408 ZNF280CQ8ND82 737 aa14.83□□□□□ -0.04
SPTLC1P3-201ENST00000403408 USP6NLQ92738 828 aa14.83□□□□□ -0.04
SPTLC1P3-201ENST00000403408 UBE2OQ9C0C9 1292 aaKnown RBP14.83□□□□□ -0.04
SPTLC1P3-201ENST00000403408 CEP126Q9P2H0 1117 aa14.83□□□□□ -0.04
SPTLC1P3-201ENST00000403408 ABCF2Q9UG63 623 aa14.83□□□□□ -0.04
SPTLC1P3-201ENST00000403408 PTPRCP08575 1304 aa14.83□□□□□ -0.04
SPTLC1P3-201ENST00000403408 POTEB2H3BUK9 544 aa14.82□□□□□ -0.04
SPTLC1P3-201ENST00000403408 CCND3P30281 292 aaPredicted RBP14.82□□□□□ -0.04
SPTLC1P3-201ENST00000403408 GCLCP48506 637 aaPredicted RBP14.82□□□□□ -0.04
SPTLC1P3-201ENST00000403408 CACNB2Q08289 660 aaPredicted RBP14.82□□□□□ -0.04
SPTLC1P3-201ENST00000403408 CCL14Q16627 93 aa14.82□□□□□ -0.04
SPTLC1P3-201ENST00000403408 Q3C1V9 767 aa14.82□□□□□ -0.04
SPTLC1P3-201ENST00000403408 PI16Q6UXB8 463 aa14.82□□□□□ -0.04
SPTLC1P3-201ENST00000403408 P2RX7Q99572 595 aaKnown RBP14.82□□□□□ -0.04
SPTLC1P3-201ENST00000403408 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.82□□□□□ -0.04
SPTLC1P3-201ENST00000403408 GNL3LQ9NVN8 582 aaKnown RBP14.82□□□□□ -0.04
SPTLC1P3-201ENST00000403408 PNMA3Q9UL41 463 aa14.82□□□□□ -0.04
SPTLC1P3-201ENST00000403408 FRMPD3Q5JV73 1810 aa14.81□□□□□ -0.04
SPTLC1P3-201ENST00000403408 CAP2P40123 477 aa14.81□□□□□ -0.04
SPTLC1P3-201ENST00000403408 MDM2Q00987 491 aaPredicted RBP14.81□□□□□ -0.04
SPTLC1P3-201ENST00000403408 DZIP1Q86YF9 867 aaKnown RBP14.81□□□□□ -0.04
SPTLC1P3-201ENST00000403408 OSBPL5Q9H0X9 879 aaPredicted RBP14.81□□□□□ -0.04
SPTLC1P3-201ENST00000403408 NPM3O75607 178 aaKnown RBP14.8□□□□□ -0.04
SPTLC1P3-201ENST00000403408 TBC1D9Q6ZT07 1266 aa14.8□□□□□ -0.04
SPTLC1P3-201ENST00000403408 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.8□□□□□ -0.04
SPTLC1P3-201ENST00000403408 PORCNQ9H237 461 aa14.8□□□□□ -0.04
SPTLC1P3-201ENST00000403408 DNAJC18Q9H819 358 aa14.8□□□□□ -0.04
SPTLC1P3-201ENST00000403408 RBPJLQ9UBG7 517 aa14.8□□□□□ -0.04
SPTLC1P3-201ENST00000403408 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
SPTLC1P3-201ENST00000403408 PDS5AQ29RF7 1337 aaKnown RBP14.8□□□□□ -0.04
SPTLC1P3-201ENST00000403408 IL15P40933 162 aaPredicted RBP14.79□□□□□ -0.04
SPTLC1P3-201ENST00000403408 NSUN4Q96CB9 384 aaKnown RBP14.79□□□□□ -0.04
SPTLC1P3-201ENST00000403408 FAM161BQ96MY7 647 aa14.79□□□□□ -0.04
SPTLC1P3-201ENST00000403408 COPRSQ9NQ92 184 aa14.79□□□□□ -0.04
SPTLC1P3-201ENST00000403408 HMG20BQ9P0W2 317 aa14.79□□□□□ -0.04
SPTLC1P3-201ENST00000403408 USP17L5A8MUK1 530 aa14.78□□□□□ -0.04
SPTLC1P3-201ENST00000403408 XRCC5P13010 732 aaKnown RBP14.78□□□□□ -0.04
SPTLC1P3-201ENST00000403408 MTMR2Q13614 643 aa14.78□□□□□ -0.04
SPTLC1P3-201ENST00000403408 MORN1Q5T089 497 aa14.78□□□□□ -0.04
SPTLC1P3-201ENST00000403408 ZGPATQ8N5A5 531 aaKnown RBP14.78□□□□□ -0.04
SPTLC1P3-201ENST00000403408 XAGE2Q96GT9 111 aa14.78□□□□□ -0.04
SPTLC1P3-201ENST00000403408 WDR18Q9BV38 432 aa14.78□□□□□ -0.04
SPTLC1P3-201ENST00000403408 FLRT1Q9NZU1 646 aa14.78□□□□□ -0.04
SPTLC1P3-201ENST00000403408 CDK5RAP2Q96SN8 1893 aa14.78□□□□□ -0.04
SPTLC1P3-201ENST00000403408 MAST2Q6P0Q8 1798 aa14.78□□□□□ -0.04
SPTLC1P3-201ENST00000403408 NCOR1O75376 2440 aa14.77□□□□□ -0.04
SPTLC1P3-201ENST00000403408 A0A1B0GUL7 405 aa14.77□□□□□ -0.05
SPTLC1P3-201ENST00000403408 CNMDO75829 334 aa14.77□□□□□ -0.05
SPTLC1P3-201ENST00000403408 HOXA7P31268 230 aaPredicted RBP14.77□□□□□ -0.05
SPTLC1P3-201ENST00000403408 HERVK_113P62684 666 aa14.77□□□□□ -0.05
SPTLC1P3-201ENST00000403408 TFCP2Q12800 502 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms