RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 OTOP1Q7RTM1 612 aa18.08■□□□□ 0.48
SMIM11A-203ENST00000399299 METTL16Q86W50 562 aaKnown RBP18.08■□□□□ 0.48
SMIM11A-203ENST00000399299 MAPKAPK5Q8IW41 473 aa18.08■□□□□ 0.48
SMIM11A-203ENST00000399299 AFG3L2Q9Y4W6 797 aa18.08■□□□□ 0.48
SMIM11A-203ENST00000399299 ZHX2Q9Y6X8 837 aa18.08■□□□□ 0.48
SMIM11A-203ENST00000399299 DDX60LQ5H9U9 1706 aaKnown RBP18.07■□□□□ 0.48
SMIM11A-203ENST00000399299 A0A0G2JLL6 359 aaPredicted RBP18.07■□□□□ 0.48
SMIM11A-203ENST00000399299 FAM196BA6NMK8 535 aa18.07■□□□□ 0.48
SMIM11A-203ENST00000399299 ATP5JP18859 108 aa18.07■□□□□ 0.48
SMIM11A-203ENST00000399299 RGS19P49795 217 aa18.07■□□□□ 0.48
SMIM11A-203ENST00000399299 PRRT2Q7Z6L0 340 aaPredicted RBP18.07■□□□□ 0.48
SMIM11A-203ENST00000399299 CD99L2Q8TCZ2 262 aa18.07■□□□□ 0.48
SMIM11A-203ENST00000399299 TRIM17Q9Y577 477 aa18.07■□□□□ 0.48
SMIM11A-203ENST00000399299 MYH7P12883 1935 aa18.06■□□□□ 0.48
SMIM11A-203ENST00000399299 PDHXO00330 501 aa18.06■□□□□ 0.48
SMIM11A-203ENST00000399299 CAP2P40123 477 aa18.06■□□□□ 0.48
SMIM11A-203ENST00000399299 ARHGEF6Q15052 776 aa18.06■□□□□ 0.48
SMIM11A-203ENST00000399299 FASTKD5Q7L8L6 764 aaKnown RBP18.06■□□□□ 0.48
SMIM11A-203ENST00000399299 MIGA1Q8NAN2 632 aa18.06■□□□□ 0.48
SMIM11A-203ENST00000399299 DNAJC2Q99543 621 aaKnown RBP18.06■□□□□ 0.48
SMIM11A-203ENST00000399299 TBC1D2Q9BYX2 928 aa18.06■□□□□ 0.48
SMIM11A-203ENST00000399299 DCTPP1Q9H773 170 aa18.06■□□□□ 0.48
SMIM11A-203ENST00000399299 ADGRA2Q96PE1 1338 aa18.05■□□□□ 0.48
SMIM11A-203ENST00000399299 LOC285556D6RIA3 1793 aa18.05■□□□□ 0.48
SMIM11A-203ENST00000399299 GOLIM4O00461 696 aa18.05■□□□□ 0.48
SMIM11A-203ENST00000399299 PDE6AP16499 860 aa18.05■□□□□ 0.48
SMIM11A-203ENST00000399299 GPAT2Q6NUI2 795 aa18.05■□□□□ 0.48
SMIM11A-203ENST00000399299 FOXP4Q8IVH2 680 aaPredicted RBP18.05■□□□□ 0.48
SMIM11A-203ENST00000399299 RIOK1Q9BRS2 568 aaKnown RBP18.05■□□□□ 0.48
SMIM11A-203ENST00000399299 EFCC1Q9HA90 598 aa18.05■□□□□ 0.48
SMIM11A-203ENST00000399299 PAG1Q9NWQ8 432 aa18.05■□□□□ 0.48
SMIM11A-203ENST00000399299 NAV1Q8NEY1 1877 aa18.05■□□□□ 0.48
SMIM11A-203ENST00000399299 HLA-DOAP06340 250 aa18.04■□□□□ 0.48
SMIM11A-203ENST00000399299 SLC9C2Q5TAH2 1124 aa18.04■□□□□ 0.48
SMIM11A-203ENST00000399299 C17orf99Q6UX52 265 aa18.04■□□□□ 0.48
SMIM11A-203ENST00000399299 YTHDC1Q96MU7 727 aaKnown RBP18.04■□□□□ 0.48
SMIM11A-203ENST00000399299 PARK7Q99497 189 aaKnown RBP18.04■□□□□ 0.48
SMIM11A-203ENST00000399299 HAUS7Q99871 368 aa18.04■□□□□ 0.48
SMIM11A-203ENST00000399299 DNAJC18Q9H819 358 aa18.04■□□□□ 0.48
SMIM11A-203ENST00000399299 GINM1Q9NU53 330 aa18.04■□□□□ 0.48
SMIM11A-203ENST00000399299 PALD1Q9ULE6 856 aa18.04■□□□□ 0.48
SMIM11A-203ENST00000399299 SLC45A1Q9Y2W3 748 aa18.04■□□□□ 0.48
SMIM11A-203ENST00000399299 USP5P45974 858 aa18.03■□□□□ 0.48
SMIM11A-203ENST00000399299 RRP1BQ14684 758 aaKnown RBP18.03■□□□□ 0.48
SMIM11A-203ENST00000399299 CRACR2BQ8N4Y2 399 aaPredicted RBP18.03■□□□□ 0.48
SMIM11A-203ENST00000399299 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
SMIM11A-203ENST00000399299 BOLA2Q9H3K6 86 aa18.03■□□□□ 0.48
SMIM11A-203ENST00000399299 PTPN22Q9Y2R2 807 aa18.03■□□□□ 0.48
SMIM11A-203ENST00000399299 ZNF532Q9HCE3 1301 aa18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 MAGEB6P1A0A0J9YX57 407 aa18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 TCRBV5S4A2TA0A5A2 114 aa18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 TRIM75PA6NK02 468 aa18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 SMARCA5O60264 1052 aaPredicted RBP18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 ASNSP08243 561 aa18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 LACTBP83111 547 aaPredicted RBP18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 CAP1Q01518 475 aa18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 EDC3Q96F86 508 aaKnown RBP18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 TRIM34Q9BYJ4 488 aa18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 EHD4Q9H223 541 aa18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 SAP30BPQ9UHR5 308 aaKnown RBP18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 PCDHB15Q9Y5E8 787 aa18.02■□□□□ 0.48
SMIM11A-203ENST00000399299 ZSWIM8A7E2V4 1837 aa18.01■□□□□ 0.47
SMIM11A-203ENST00000399299 USP17L5A8MUK1 530 aa18.01■□□□□ 0.47
SMIM11A-203ENST00000399299 KIF22Q14807 665 aa18.01■□□□□ 0.47
SMIM11A-203ENST00000399299 GADL1Q6ZQY3 521 aa18.01■□□□□ 0.47
SMIM11A-203ENST00000399299 CCDC84Q86UT8 332 aaPredicted RBP18.01■□□□□ 0.47
SMIM11A-203ENST00000399299 PROCA1Q8NCQ7 364 aaPredicted RBP18.01■□□□□ 0.47
SMIM11A-203ENST00000399299 ZNF280CQ8ND82 737 aa18.01■□□□□ 0.47
SMIM11A-203ENST00000399299 CRNKL1Q9BZJ0 848 aaKnown RBP18.01■□□□□ 0.47
SMIM11A-203ENST00000399299 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.01■□□□□ 0.47
SMIM11A-203ENST00000399299 AS3MTQ9HBK9 375 aa18.01■□□□□ 0.47
SMIM11A-203ENST00000399299 ECHDC1Q9NTX5 307 aa18.01■□□□□ 0.47
SMIM11A-203ENST00000399299 GNRH1P01148 92 aa18■□□□□ 0.47
SMIM11A-203ENST00000399299 ADD2P35612 726 aa18■□□□□ 0.47
SMIM11A-203ENST00000399299 SPP2Q13103 211 aa18■□□□□ 0.47
SMIM11A-203ENST00000399299 TTC6Q86TZ1 520 aa18■□□□□ 0.47
SMIM11A-203ENST00000399299 GPATCH3Q96I76 525 aa18■□□□□ 0.47
SMIM11A-203ENST00000399299 WDR18Q9BV38 432 aa18■□□□□ 0.47
SMIM11A-203ENST00000399299 AGTPBP1Q9UPW5 1226 aa18■□□□□ 0.47
SMIM11A-203ENST00000399299 MLLT1Q03111 559 aaPredicted RBP17.99■□□□□ 0.47
SMIM11A-203ENST00000399299 SH3D19Q5HYK7 790 aa17.99■□□□□ 0.47
SMIM11A-203ENST00000399299 CPA4Q9UI42 421 aa17.99■□□□□ 0.47
SMIM11A-203ENST00000399299 SERPINB13Q9UIV8 391 aa17.99■□□□□ 0.47
SMIM11A-203ENST00000399299 TNRC18O15417 2968 aaPredicted RBP17.99■□□□□ 0.47
SMIM11A-203ENST00000399299 MGAMO43451 1857 aa17.99■□□□□ 0.47
SMIM11A-203ENST00000399299 CYP2C8P10632 490 aa17.98■□□□□ 0.47
SMIM11A-203ENST00000399299 BCRP11274 1271 aa17.98■□□□□ 0.47
SMIM11A-203ENST00000399299 SOX10P56693 466 aa17.98■□□□□ 0.47
SMIM11A-203ENST00000399299 UBE3CQ15386 1083 aa17.98■□□□□ 0.47
SMIM11A-203ENST00000399299 TATDN1Q6P1N9 297 aa17.98■□□□□ 0.47
SMIM11A-203ENST00000399299 CRBNQ96SW2 442 aa17.98■□□□□ 0.47
SMIM11A-203ENST00000399299 ZBTB21Q9ULJ3 1066 aa17.98■□□□□ 0.47
SMIM11A-203ENST00000399299 RBBP6Q7Z6E9 1792 aaKnown RBP17.98■□□□□ 0.47
SMIM11A-203ENST00000399299 PRMT2P55345 433 aa17.97■□□□□ 0.47
SMIM11A-203ENST00000399299 JAG1P78504 1218 aa17.97■□□□□ 0.47
SMIM11A-203ENST00000399299 AAMPQ13685 434 aa17.97■□□□□ 0.47
SMIM11A-203ENST00000399299 ZSCAN25Q6NSZ9 544 aa17.97■□□□□ 0.47
SMIM11A-203ENST00000399299 LCORLQ8N3X6 602 aa17.97■□□□□ 0.47
SMIM11A-203ENST00000399299 ARMC5Q96C12 935 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms