RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 PI16Q6UXB8 463 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 KLHL34Q8N239 644 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 DSCC1Q9BVC3 393 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 GOPCQ9HD26 462 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 CAPN7Q9Y6W3 813 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 MROH2AA6NES4 1674 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 A0A1B0GUA9 196 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 GOLGA6BA6NDN3 693 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 UBA7P41226 1012 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 KIF5AQ12840 1032 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 FBXO18Q8NFZ0 1043 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 RPGRQ92834 1020 aaKnown RBP16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 SETDB2Q96T68 719 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 EPC1Q9H2F5 836 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 TMEM51Q9NW97 253 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 ERVV-2B6SEH9 535 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 PUM3Q15397 648 aaKnown RBP16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 SPECC1LQ69YQ0 1117 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 BCAS4Q8TDM0 211 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 IFT81Q8WYA0 676 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 FAM204AQ9H8W3 233 aa16.46■□□□□ 0.23
RPRD1A-202ENST00000399022 TRIM66O15016 1216 aa16.46■□□□□ 0.22
RPRD1A-202ENST00000399022 MYO1BO43795 1136 aa16.46■□□□□ 0.22
RPRD1A-202ENST00000399022 FGAP02671 866 aa16.46■□□□□ 0.22
RPRD1A-202ENST00000399022 SCRN1Q12765 414 aa16.46■□□□□ 0.22
RPRD1A-202ENST00000399022 NECTIN1Q15223 517 aa16.46■□□□□ 0.22
RPRD1A-202ENST00000399022 CFAP58Q5T655 872 aa16.46■□□□□ 0.22
RPRD1A-202ENST00000399022 ADALQ6DHV7 355 aa16.46■□□□□ 0.22
RPRD1A-202ENST00000399022 TRIM47Q96LD4 638 aa16.46■□□□□ 0.22
RPRD1A-202ENST00000399022 CYP27B1O15528 508 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 CYP2C19P33261 490 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 ADD1P35611 737 aaKnown RBP16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 CCT5P48643 541 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 MSL1Q68DK7 614 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 TRIM75PA6NK02 468 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 TUBB2AQ13885 445 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 TUBB2BQ9BVA1 445 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 KCNH3Q9ULD8 1083 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 TTF2Q9UNY4 1162 aaKnown RBP16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 ZC3H13Q5T200 1668 aaKnown RBP16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 hCG_1642624A0A1W2PR95 340 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 TACC1O75410 805 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 VAV2P52735 878 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 CABP5Q9NP86 173 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 INCENPQ9NQS7 918 aa16.45■□□□□ 0.22
RPRD1A-202ENST00000399022 KIF5BP33176 963 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 CLNS1AP54105 237 aaKnown RBP16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 KRT83P78385 493 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 PLA2G4DQ86XP0 818 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 FANCLQ9NW38 375 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 PCDHA7Q9UN72 937 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 VPS16Q9H269 839 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 ZNF287Q9HBT7 754 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 CCDC151A5D8V7 595 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 RFC4P35249 363 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 NDUFA8P51970 172 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 SND1Q7KZF4 910 aaKnown RBP eCLIP16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 LUC7L2Q9Y383 392 aaKnown RBP16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 MACROD2A1Z1Q3 448 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 IDEP14735 1019 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 UBXN1Q04323 297 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 FAM71BQ8TC56 605 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 SLF1Q9BQI6 1058 aa16.44■□□□□ 0.22
RPRD1A-202ENST00000399022 PNOCQ13519 176 aa16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 KRT40Q6A162 431 aa16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 GREM2Q9H772 168 aa16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 MCM9Q9NXL9 1143 aa16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.222e-7■□□□□ 9.8
RPRD1A-202ENST00000399022 PHLPP2Q6ZVD8 1323 aa16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 GOLGA6L10A0A0M3HER8 536 aa16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 HPDP32754 393 aaPredicted RBP16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 CPLX4Q7Z7G2 160 aa16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 C8orf37Q96NL8 207 aa16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 ATP10DQ9P241 1426 aa16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 TMCO5BA8MYB1 307 aa16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 CMTR1Q8N1G2 835 aaKnown RBP16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 KRI1Q8N9T8 703 aaKnown RBP16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 FEZ2Q9UHY8 353 aaPredicted RBP16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 KCNJ14Q9UNX9 436 aa16.43■□□□□ 0.22
RPRD1A-202ENST00000399022 NEFHP12036 1026 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 ZFYVE27Q5T4F4 411 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 DIS3L2Q8IYB7 885 aaKnown RBP16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 LPIN2Q92539 896 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 IL25Q9H293 177 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 BMP2KQ9NSY1 1161 aaPredicted RBP16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 USP31Q70CQ4 1352 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 GNGT1P63211 74 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 SRGAP1Q7Z6B7 1085 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 HINFPQ9BQA5 517 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 NPHP4O75161 1426 aaPredicted RBP16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 PFKFB2O60825 505 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 BAG3O95817 575 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 PFKFB1P16118 471 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 CCDC42Q96M95 316 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 F8W031 263 aaPredicted RBP16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 GNAT2P19087 354 aa16.42■□□□□ 0.22
RPRD1A-202ENST00000399022 ARFGAP2Q8N6H7 521 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms