RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PSMA7O14818 248 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 KIAA0825Q8IV33 1275 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 CEP112Q8N8E3 955 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 MASTLQ96GX5 879 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 INO80Q9ULG1 1556 aaPredicted RBP16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 POTEB2H3BUK9 544 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 STX17P56962 302 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 DNM1Q05193 864 aaKnown RBP16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 HSF2BPO75031 334 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 BMP15O95972 392 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 CPXCR1Q8N123 301 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 UIMC1Q96RL1 719 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 CTAGE1Q96RT6 745 aa16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 HEG1Q9ULI3 1381 aa16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 FER1L4A9Z1Z3 1794 aa16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 GTF2F1P35269 517 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 CYLC1P35663 651 aaPredicted RBP16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 PABPC4Q13310 644 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 FBXO41Q8TF61 875 aa16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 HELLSQ9NRZ9 838 aa16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 GOLGA6L9A6NEM1 432 aa16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 MICALCLQ6ZW33 695 aa16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 PLCB3Q01970 1234 aa16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 TRIM75PA6NK02 468 aa16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 PPM1EQ8WY54 764 aa16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 DNAJC25Q9H1X3 360 aa16.05■□□□□ 0.16
PCDHA11-201ENST00000398640 EHBP1Q8NDI1 1231 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 PLVAPQ9BX97 442 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 SLC5A4Q9NY91 659 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 ADRA2BP18089 450 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 LEMD3Q9Y2U8 911 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 SCNN1DP51172 638 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 CHRNDQ07001 517 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 IQCGQ9H095 443 aaKnown RBP16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 ERVV-1B6SEH8 477 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 CCDC155Q8N6L0 562 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 CCDC63Q8NA47 563 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 TGFBRAP1Q8WUH2 860 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 BBXQ8WY36 941 aaPredicted RBP16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 DACT1Q9NYF0 836 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 ZNF804BA4D1E1 1349 aa16.04■□□□□ 0.16
PCDHA11-201ENST00000398640 GADL1Q6ZQY3 521 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 MAEAQ7L5Y9 396 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 ARMC9Q7Z3E5 817 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 MAPKAPK5Q8IW41 473 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 TRIM6Q9C030 488 aaPredicted RBP16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 CCDC171Q6TFL3 1326 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 CCDC169A6NNP5 214 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 USH1GQ495M9 461 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 DBNDD2Q9BQY9 259 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 CPSF1Q10570 1443 aaKnown RBP16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 CKAP4Q07065 602 aaKnown RBP16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 PIK3C2BO00750 1634 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 LPXNO60711 386 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 CNGA1P29973 690 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 SELENOOQ9BVL4 669 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 TTC12Q9H892 705 aaPredicted RBP16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 APBB1IPQ7Z5R6 666 aaPredicted RBP16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 PAGR1Q9BTK6 254 aa16.03■□□□□ 0.16
PCDHA11-201ENST00000398640 PPRC1Q5VV67 1664 aaKnown RBP16.02■□□□□ 0.16
PCDHA11-201ENST00000398640 MADDQ8WXG6 1647 aa16.02■□□□□ 0.16
PCDHA11-201ENST00000398640 ZMYM4Q5VZL5 1548 aa16.02■□□□□ 0.16
PCDHA11-201ENST00000398640 CAVIN2O95810 425 aa16.02■□□□□ 0.16
PCDHA11-201ENST00000398640 RNF34Q969K3 372 aa16.02■□□□□ 0.16
PCDHA11-201ENST00000398640 LETM2Q2VYF4 491 aa16.02■□□□□ 0.16
PCDHA11-201ENST00000398640 SPTLC2O15270 562 aa16.02■□□□□ 0.15
PCDHA11-201ENST00000398640 GNA11P29992 359 aa16.02■□□□□ 0.15
PCDHA11-201ENST00000398640 DCAF17Q5H9S7 520 aaPredicted RBP16.02■□□□□ 0.15
PCDHA11-201ENST00000398640 CAPZA3Q96KX2 299 aa16.02■□□□□ 0.15
PCDHA11-201ENST00000398640 CALML3P27482 149 aa16.02■□□□□ 0.15
PCDHA11-201ENST00000398640 MXRA7P84157 204 aa16.02■□□□□ 0.15
PCDHA11-201ENST00000398640 UBXN1Q04323 297 aa16.02■□□□□ 0.15
PCDHA11-201ENST00000398640 SPECC1LQ69YQ0 1117 aa16.02■□□□□ 0.15
PCDHA11-201ENST00000398640 SORBS3O60504 671 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 KIF4AO95239 1232 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 CIAPIN1Q6FI81 312 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 PKNOX2Q96KN3 472 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 DNAI1Q9UI46 699 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 GYG1P46976 350 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 BIRC3Q13489 604 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 FAM47CQ5HY64 1035 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 CCDC129Q6ZRS4 1044 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 AXIN2Q9Y2T1 843 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 SPATA31A1Q5TZJ5 1347 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 KRT5P13647 590 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 DBNDD1Q9H9R9 158 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 RASAL2Q9UJF2 1139 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 NDC80O14777 642 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 C21orf2O43822 256 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 F13A1P00488 732 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 HS2ST1Q7LGA3 356 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 SREK1Q8WXA9 508 aaKnown RBP16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
PCDHA11-201ENST00000398640 SMIM23A6NLE4 172 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 SKILP12757 684 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 CPA1P15085 419 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 CREB3L3Q68CJ9 461 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 SUPT20HL1Q3ZLR7 823 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 RBM28Q9NW13 759 aaKnown RBP16■□□□□ 0.15
PCDHA11-201ENST00000398640 SYT1P21579 422 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms