RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 FAM221AA4D161 298 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 FAM86C2PA6NEL3 165 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 METTL12A8MUP2 240 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 PLD2O14939 933 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 MAN1A2O60476 641 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 CILPO75339 1184 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 TRPA1O75762 1119 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 HSP90AA1P07900 732 aaKnown RBP2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 CT47B1P0C2W7 299 aaPredicted RBP2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 ARAFP10398 606 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 GUCY2CP25092 1073 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 GRIA4P48058 902 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 NEK4P51957 841 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 RASSF7Q02833 373 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 PPP2R3AQ06190 1150 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 MTMR1Q13613 665 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 RAPGEF1Q13905 1077 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 NCAPHQ15003 741 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 LONRF2Q1L5Z9 754 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 SPRED3Q2MJR0 410 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 GRAMD1BQ3KR37 738 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 FNDC3BQ53EP0 1204 aaKnown RBP2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 FAM102BQ5T8I3 360 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 KRBA2Q6ZNG9 492 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 NECAB2Q7Z6G3 386 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 STRA8Q7Z7C7 330 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 LRRTM3Q86VH5 581 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 NLRP8Q86W28 1048 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 CCNJLQ8IV13 435 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 PPM1KQ8N3J5 372 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 SVIPQ8NHG7 77 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 E2F7Q96AV8 911 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 CHMP4CQ96CF2 233 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 SLC39A13Q96H72 371 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 ZNF512BQ96KM6 892 aaPredicted RBP2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 CLUHP3Q96NS8 147 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 TRERF1Q96PN7 1200 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 PNMA5Q96PV4 448 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 TM9SF2Q99805 663 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 DHRS4Q9BTZ2 278 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 GRIP2Q9C0E4 1043 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 CDH19Q9H159 772 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 NCOA5Q9HCD5 579 aaKnown RBP2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 BRD7Q9NPI1 651 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 PRDM10Q9NQV6 1147 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 TMEM39AQ9NV64 488 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 SWAP70Q9UH65 585 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 USP25Q9UHP3 1055 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 DNMT3LQ9UJW3 386 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 DAAM1Q9Y4D1 1078 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 SLC12A7Q9Y666 1083 aa2.68□□□□□ -1.98
HMGN2P39-201ENST00000398005 DNAJC25-GNG10A0A024R161 153 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 VSTM5A8MXK1 200 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 UPK3BL1B0FP48 263 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 UPK3BL2E5RIL1 263 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 TBX3O15119 743 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 ADCY3O60266 1144 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 SUSD5O60279 629 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 MMP20O60882 483 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 GDF11O95390 407 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 EGFRP00533 1210 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 FGAP02671 866 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 PSAPP07602 524 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 RARAP10276 462 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 ACPPP15309 386 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 ZSCAN20P17040 1043 aaPredicted RBP2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 SDSP20132 328 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 BDNFP23560 247 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 ITPKAP23677 461 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 GRNP28799 593 aaKnown RBP2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 GPC1P35052 558 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 NEK3P51956 506 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 TYRO3Q06418 890 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 HYAL2Q12891 473 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 TCIRG1Q13488 830 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 PICALMQ13492 652 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 SETDB1Q15047 1291 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 LRRC14Q15048 493 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 LRRFIP1Q32MZ4 808 aaKnown RBP2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 SLC10A6Q3KNW5 377 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 SV2CQ496J9 727 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 FAM209AQ5JX71 171 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 RNF219Q5W0B1 726 aaPredicted RBP2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 IL31Q6EBC2 164 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 KIAA1211LQ6NV74 962 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 LLGL2Q6P1M3 1020 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 Q6ZVU0 165 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 DGKHQ86XP1 1220 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 AMOTL1Q8IY63 956 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 TCEAL8Q8IYN2 117 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 IFNL3Q8IZI9 196 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 AHI1Q8N157 1196 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 LINC00528Q8N1L1 170 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 TMEM151AQ8N4L1 468 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 MEIOBQ8N635 442 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 GPATCH11Q8N954 259 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 JPH3Q8WXH2 748 aaPredicted RBP2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 SLC7A3Q8WY07 619 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 CNTNAP3BQ96NU0 1288 aa2.67□□□□□ -1.98
HMGN2P39-201ENST00000398005 ZIC5Q96T25 663 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms