RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 MOGSQ13724 837 aa10.91□□□□□ -0.66
CAPN3-208ENST00000397204 ALDH1L2Q3SY69 923 aa10.91□□□□□ -0.66
CAPN3-208ENST00000397204 NOL9Q5SY16 702 aaKnown RBP10.91□□□□□ -0.66
CAPN3-208ENST00000397204 TRIM47Q96LD4 638 aa10.91□□□□□ -0.66
CAPN3-208ENST00000397204 CPA4Q9UI42 421 aa10.91□□□□□ -0.66
CAPN3-208ENST00000397204 DENND2AQ9ULE3 1009 aa10.91□□□□□ -0.66
CAPN3-208ENST00000397204 A0A1B0GUL6 1792 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 SALL1Q9NSC2 1324 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 ENTPD3O75355 529 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 FMNL1O95466 1100 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-208ENST00000397204 MYCP01106 439 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-208ENST00000397204 CAPN2P17655 700 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 GRK4P32298 578 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 MAP3K10Q02779 954 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 NFIAQ12857 509 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 DIXDC1Q155Q3 683 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 ATP2B3Q16720 1220 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 PPP4R3BQ5MIZ7 849 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 FASTKD5Q7L8L6 764 aaKnown RBP10.9□□□□□ -0.66
CAPN3-208ENST00000397204 ZNF454Q8N9F8 522 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 RAET1EQ8TD07 263 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 FAM198AQ9UFP1 575 aa10.9□□□□□ -0.66
CAPN3-208ENST00000397204 A0A0C4DFX4 3053 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 PHF20L1A8MW92 1017 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 H0YGN5 161 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 GJB1P08034 283 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 UBTFL1P0CB47 393 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-208ENST00000397204 OSBPP22059 807 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 CTGFP29279 349 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 PRDX5P30044 214 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 IL15P40933 162 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-208ENST00000397204 SLFN5Q08AF3 891 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 GPAT2Q6NUI2 795 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 POTEEQ6S8J3 1075 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 ZGPATQ8N5A5 531 aaKnown RBP10.89□□□□□ -0.67
CAPN3-208ENST00000397204 PARK7Q99497 189 aaKnown RBP10.89□□□□□ -0.67
CAPN3-208ENST00000397204 IDI2Q9BXS1 227 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 SZT2Q5T011 3432 aa10.89□□□□□ -0.67
CAPN3-208ENST00000397204 ADGRA2Q96PE1 1338 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 BCRP11274 1271 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 GJA8P48165 433 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 FCGRTP55899 365 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 UBXN2AP68543 259 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 MTFR1Q15390 333 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 ZFPM1Q8IX07 1006 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 SLF2Q8IX21 1173 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 DPF3Q92784 378 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 SIL1Q9H173 461 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 PICK1Q9NRD5 415 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 BIN2Q9UBW5 565 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-208ENST00000397204 SLC45A1Q9Y2W3 748 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 ZHX2Q9Y6X8 837 aa10.88□□□□□ -0.67
CAPN3-208ENST00000397204 MYPNQ86TC9 1320 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 OTOFQ9HC10 1997 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 A0A0G2JLL6 359 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-208ENST00000397204 CTNND1O60716 968 aaKnown RBP10.87□□□□□ -0.67
CAPN3-208ENST00000397204 CT47B1P0C2W7 299 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-208ENST00000397204 CCL5P13501 91 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 PTPRAP18433 802 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 RGS3P49796 1198 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 FOSBP53539 338 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 SPTY2D1Q68D10 685 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-208ENST00000397204 PRRT2Q7Z6L0 340 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-208ENST00000397204 UBE2Q1Q7Z7E8 422 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 SCYL3Q8IZE3 742 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 HTATIP2Q9BUP3 242 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 RNF208Q9H0X6 261 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 COPRSQ9NQ92 184 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 SMC4Q9NTJ3 1288 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 AFG3L2Q9Y4W6 797 aa10.87□□□□□ -0.67
CAPN3-208ENST00000397204 LRRFIP2Q9Y608 721 aaKnown RBP10.87□□□□□ -0.67
CAPN3-208ENST00000397204 RBBP6Q7Z6E9 1792 aaKnown RBP10.87□□□□□ -0.67
CAPN3-208ENST00000397204 GAKO14976 1311 aa10.86□□□□□ -0.67
CAPN3-208ENST00000397204 CYP2C8P10632 490 aa10.86□□□□□ -0.67
CAPN3-208ENST00000397204 PHKA1P46020 1223 aa10.86□□□□□ -0.67
CAPN3-208ENST00000397204 CCDC102BQ68D86 513 aa10.86□□□□□ -0.67
CAPN3-208ENST00000397204 SPNS2Q8IVW8 549 aa10.86□□□□□ -0.67
CAPN3-208ENST00000397204 ZSCAN29Q8IWY8 852 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-208ENST00000397204 TRMT2AQ8IZ69 625 aaKnown RBP10.86□□□□□ -0.67
CAPN3-208ENST00000397204 SHISA4Q96DD7 197 aa10.86□□□□□ -0.67
CAPN3-208ENST00000397204 NR2E3Q9Y5X4 410 aa10.86□□□□□ -0.67
CAPN3-208ENST00000397204 ARAP2Q8WZ64 1704 aa10.86□□□□□ -0.67
CAPN3-208ENST00000397204 PDS5AQ29RF7 1337 aaKnown RBP10.85□□□□□ -0.67
CAPN3-208ENST00000397204 SGPL1O95470 568 aa10.85□□□□□ -0.67
CAPN3-208ENST00000397204 MAP4K4O95819 1239 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-208ENST00000397204 PBX2P40425 430 aa10.85□□□□□ -0.67
CAPN3-208ENST00000397204 TIMM10P62072 90 aa10.85□□□□□ -0.67
CAPN3-208ENST00000397204 PRKCZQ05513 592 aa10.85□□□□□ -0.67
CAPN3-208ENST00000397204 SH3BP5LQ7L8J4 393 aa10.85□□□□□ -0.67
CAPN3-208ENST00000397204 PXYLP1Q8TE99 480 aa10.85□□□□□ -0.67
CAPN3-208ENST00000397204 API5Q9BZZ5 524 aaKnown RBP10.85□□□□□ -0.67
CAPN3-208ENST00000397204 NOB1Q9ULX3 412 aaKnown RBP10.85□□□□□ -0.67
CAPN3-208ENST00000397204 AKAP2Q9Y2D5 859 aa10.85□□□□□ -0.67
CAPN3-208ENST00000397204 DDTLA6NHG4 134 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-208ENST00000397204 ADCY3O60266 1144 aa10.84□□□□□ -0.67
CAPN3-208ENST00000397204 IRF5Q13568 498 aa10.84□□□□□ -0.67
CAPN3-208ENST00000397204 GADL1Q6ZQY3 521 aa10.84□□□□□ -0.67
CAPN3-208ENST00000397204 DZIP1Q86YF9 867 aaKnown RBP10.84□□□□□ -0.67
CAPN3-208ENST00000397204 U2AF1L4Q8WU68 220 aaKnown RBP10.84□□□□□ -0.67
CAPN3-208ENST00000397204 ABCF2Q9UG63 623 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms