RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 CCDC129Q6ZRS4 1044 aa35.24■■■■□ 3.23
CHCHD4-202ENST00000396914 AMOTL1Q8IY63 956 aa35.24■■■■□ 3.23
CHCHD4-202ENST00000396914 HIP1O00291 1037 aa35.23■■■■□ 3.23
CHCHD4-202ENST00000396914 INPP5BP32019 993 aa35.23■■■■□ 3.23
CHCHD4-202ENST00000396914 MKRN3Q13064 507 aaKnown RBP35.23■■■■□ 3.23
CHCHD4-202ENST00000396914 VGLL4Q14135 290 aa35.23■■■■□ 3.23
CHCHD4-202ENST00000396914 PPP1R3FQ6ZSY5 799 aaPredicted RBP35.23■■■■□ 3.23
CHCHD4-202ENST00000396914 RASAL3Q86YV0 1011 aa35.23■■■■□ 3.23
CHCHD4-202ENST00000396914 HERC5Q9UII4 1024 aaKnown RBP35.23■■■■□ 3.23
CHCHD4-202ENST00000396914 A0A0D9SFI3 127 aa35.23■■■■□ 3.23
CHCHD4-202ENST00000396914 UNCXA6NJT0 531 aa35.23■■■■□ 3.23
CHCHD4-202ENST00000396914 AOC2O75106 756 aa35.23■■■■□ 3.23
CHCHD4-202ENST00000396914 FOXP4Q8IVH2 680 aaPredicted RBP35.23■■■■□ 3.23
CHCHD4-202ENST00000396914 OTOFQ9HC10 1997 aa35.22■■■■□ 3.23
CHCHD4-202ENST00000396914 TBC1D12O60347 775 aa35.22■■■■□ 3.23
CHCHD4-202ENST00000396914 SLC10A3P09131 477 aa35.22■■■■□ 3.23
CHCHD4-202ENST00000396914 MCMDC2Q4G0Z9 681 aa35.22■■■■□ 3.23
CHCHD4-202ENST00000396914 CWC27Q6UX04 472 aaKnown RBP35.22■■■■□ 3.23
CHCHD4-202ENST00000396914 MAP3K10Q02779 954 aa35.2■■■■□ 3.23
CHCHD4-202ENST00000396914 ZNF112Q9UJU3 913 aa35.2■■■■□ 3.23
CHCHD4-202ENST00000396914 GSG1L2A8MUP6 293 aa35.19■■■■□ 3.22
CHCHD4-202ENST00000396914 FAM155AB1AL88 458 aaPredicted RBP35.19■■■■□ 3.22
CHCHD4-202ENST00000396914 CYP2D6P10635 497 aa35.19■■■■□ 3.22
CHCHD4-202ENST00000396914 TDO2P48775 406 aa35.19■■■■□ 3.22
CHCHD4-202ENST00000396914 PLCD1P51178 756 aa35.19■■■■□ 3.22
CHCHD4-202ENST00000396914 NOGQ13253 232 aa35.19■■■■□ 3.22
CHCHD4-202ENST00000396914 NACAP1Q9BZK3 213 aa35.19■■■■□ 3.22
CHCHD4-202ENST00000396914 SERPINB13Q9UIV8 391 aa35.19■■■■□ 3.22
CHCHD4-202ENST00000396914 PHF20L1A8MW92 1017 aa35.18■■■■□ 3.22
CHCHD4-202ENST00000396914 PATL2C9JE40 543 aaKnown RBP35.18■■■■□ 3.22
CHCHD4-202ENST00000396914 USP17L12C9JPN9 530 aa35.18■■■■□ 3.22
CHCHD4-202ENST00000396914 USP17L21D6R901 530 aa35.18■■■■□ 3.22
CHCHD4-202ENST00000396914 BAZ2AQ9UIF9 1905 aaKnown RBP35.18■■■■□ 3.22
CHCHD4-202ENST00000396914 OPTNQ96CV9 577 aa35.16■■■■□ 3.22
CHCHD4-202ENST00000396914 WNK4Q96J92 1243 aa35.16■■■■□ 3.22
CHCHD4-202ENST00000396914 PICK1Q9NRD5 415 aa35.16■■■■□ 3.22
CHCHD4-202ENST00000396914 SNCAIPQ9Y6H5 919 aa35.16■■■■□ 3.22
CHCHD4-202ENST00000396914 DDX60LQ5H9U9 1706 aaKnown RBP35.16■■■■□ 3.22
CHCHD4-202ENST00000396914 SIPA1L1O43166 1804 aa35.16■■■■□ 3.22
CHCHD4-202ENST00000396914 CYP2D7A0A087X1C5 515 aa35.15■■■■□ 3.22
CHCHD4-202ENST00000396914 MFAP1P55081 439 aaKnown RBP35.15■■■■□ 3.22
CHCHD4-202ENST00000396914 GIMAP6Q6P9H5 292 aa35.15■■■■□ 3.22
CHCHD4-202ENST00000396914 OTUD5Q96G74 571 aa35.15■■■■□ 3.22
CHCHD4-202ENST00000396914 EHD4Q9H223 541 aa35.15■■■■□ 3.22
CHCHD4-202ENST00000396914 CTNND1O60716 968 aaKnown RBP35.15■■■■□ 3.22
CHCHD4-202ENST00000396914 SPRYD7Q5W111 196 aa35.15■■■■□ 3.22
CHCHD4-202ENST00000396914 CTR9Q6PD62 1173 aa35.15■■■■□ 3.22
CHCHD4-202ENST00000396914 CNKSR2Q8WXI2 1034 aa35.15■■■■□ 3.22
CHCHD4-202ENST00000396914 ARPP21Q9UBL0 812 aaPredicted RBP35.15■■■■□ 3.22
CHCHD4-202ENST00000396914 MINDY4BA8MYZ0 360 aa35.14■■■■□ 3.22
CHCHD4-202ENST00000396914 MAP2K2P36507 400 aa35.14■■■■□ 3.22
CHCHD4-202ENST00000396914 KIF23Q02241 960 aaPredicted RBP35.14■■■■□ 3.22
CHCHD4-202ENST00000396914 EVX2Q03828 476 aa35.14■■■■□ 3.22
CHCHD4-202ENST00000396914 SCYL3Q8IZE3 742 aa35.14■■■■□ 3.22
CHCHD4-202ENST00000396914 IFNL3Q8IZI9 196 aa35.14■■■■□ 3.22
CHCHD4-202ENST00000396914 NAPBQ9H115 298 aa35.14■■■■□ 3.22
CHCHD4-202ENST00000396914 DNAJC18Q9H819 358 aa35.14■■■■□ 3.22
CHCHD4-202ENST00000396914 CCDC171Q6TFL3 1326 aa35.13■■■■□ 3.21
CHCHD4-202ENST00000396914 C12orf60Q5U649 245 aa35.13■■■■□ 3.21
CHCHD4-202ENST00000396914 ZNF589Q86UQ0 364 aaPredicted RBP35.13■■■■□ 3.21
CHCHD4-202ENST00000396914 METTL16Q86W50 562 aaKnown RBP35.13■■■■□ 3.21
CHCHD4-202ENST00000396914 ERO1BQ86YB8 467 aa35.13■■■■□ 3.21
CHCHD4-202ENST00000396914 ZIC5Q96T25 663 aa35.13■■■■□ 3.21
CHCHD4-202ENST00000396914 EPB41L4AQ9HCS5 686 aaPredicted RBP35.13■■■■□ 3.21
CHCHD4-202ENST00000396914 NOL9Q5SY16 702 aaKnown RBP35.12■■■■□ 3.21
CHCHD4-202ENST00000396914 BMP2KLQ5H9B9 411 aa35.11■■■■□ 3.21
CHCHD4-202ENST00000396914 VPS53Q5VIR6 699 aa35.11■■■■□ 3.21
CHCHD4-202ENST00000396914 DYNLL2Q96FJ2 89 aa35.11■■■■□ 3.21
CHCHD4-202ENST00000396914 SPDYE5A6NIY4 337 aa35.1■■■■□ 3.21
CHCHD4-202ENST00000396914 ZBTB48P10074 688 aaPredicted RBP35.1■■■■□ 3.21
CHCHD4-202ENST00000396914 CAP2P40123 477 aa35.1■■■■□ 3.21
CHCHD4-202ENST00000396914 STK11IPQ8N1F8 1099 aa35.1■■■■□ 3.21
CHCHD4-202ENST00000396914 RUFY2Q8WXA3 655 aa35.1■■■■□ 3.21
CHCHD4-202ENST00000396914 GDF11O95390 407 aa35.09■■■■□ 3.21
CHCHD4-202ENST00000396914 CHMLP26374 656 aa35.09■■■■□ 3.21
CHCHD4-202ENST00000396914 GJA5P36382 358 aa35.08■■■■□ 3.21
CHCHD4-202ENST00000396914 RRP1BQ14684 758 aaKnown RBP35.08■■■■□ 3.21
CHCHD4-202ENST00000396914 SBK1Q52WX2 424 aa35.08■■■■□ 3.21
CHCHD4-202ENST00000396914 CERKLQ49MI3 558 aaPredicted RBP35.07■■■■□ 3.21
CHCHD4-202ENST00000396914 JMYQ8N9B5 988 aa35.07■■■■□ 3.21
CHCHD4-202ENST00000396914 DOCK1Q14185 1865 aa35.07■■■■□ 3.2
CHCHD4-202ENST00000396914 SMIM22K7EJ46 135 aa35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 PPATQ06203 517 aa35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 SLC44A5Q8NCS7 719 aa35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 FRMD4AQ9P2Q2 1039 aaPredicted RBP35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 SWAP70Q9UH65 585 aa35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 ZHX2Q9Y6X8 837 aa35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 HSPD1P10809 573 aaKnown RBP35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 PTPRAP18433 802 aa35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 SHMT1P34896 483 aa35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 MAP2K1Q02750 393 aaPredicted RBP35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 GABPAQ06546 454 aa35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 TATDN1Q6P1N9 297 aa35.06■■■■□ 3.2
CHCHD4-202ENST00000396914 PPIL2Q13356 520 aa35.05■■■■□ 3.2
CHCHD4-202ENST00000396914 BEGAINQ9BUH8 593 aa35.05■■■■□ 3.2
CHCHD4-202ENST00000396914 MANSC4A6NHS7 340 aaPredicted RBP35.04■■■■□ 3.2
CHCHD4-202ENST00000396914 SREBF2Q12772 1141 aa35.04■■■■□ 3.2
CHCHD4-202ENST00000396914 CCDC84Q86UT8 332 aaPredicted RBP35.04■■■■□ 3.2
CHCHD4-202ENST00000396914 ATAD5Q96QE3 1844 aa35.04■■■■□ 3.2
CHCHD4-202ENST00000396914 THSD7BQ9C0I4 1608 aa35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms