RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 RNF41Q9H4P4 317 aaPredicted RBP16.69■□□□□ 0.26
GAPDH-203ENST00000396858 SCN4AP35499 1836 aa16.68■□□□□ 0.26
GAPDH-203ENST00000396858 CD2BP2O95400 341 aaKnown RBP16.68■□□□□ 0.26
GAPDH-203ENST00000396858 HLA-DOAP06340 250 aa16.68■□□□□ 0.26
GAPDH-203ENST00000396858 SLC3A2P08195 630 aaKnown RBP16.68■□□□□ 0.26
GAPDH-203ENST00000396858 SLURP2P0DP57 97 aa16.68■□□□□ 0.26
GAPDH-203ENST00000396858 RPS6KB1P23443 525 aa16.68■□□□□ 0.26
GAPDH-203ENST00000396858 PSMA5P28066 241 aa16.68■□□□□ 0.26
GAPDH-203ENST00000396858 MFSD6Q6ZSS7 791 aa16.68■□□□□ 0.26
GAPDH-203ENST00000396858 NCOA7Q8NI08 942 aa16.68■□□□□ 0.26
GAPDH-203ENST00000396858 TMEM39BQ9GZU3 492 aa16.68■□□□□ 0.26
GAPDH-203ENST00000396858 ZSWIM6Q9HCJ5 1215 aa16.68■□□□□ 0.26
GAPDH-203ENST00000396858 CYP46A1Q9Y6A2 500 aa16.68■□□□□ 0.26
GAPDH-203ENST00000396858 FAM196BA6NMK8 535 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 EPHX2P34913 555 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 NEK4P51957 841 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 ANTXR2P58335 489 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 TRDNQ13061 729 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 FKBP1CQ5VVH2 108 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 C16orf86Q6ZW13 317 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
GAPDH-203ENST00000396858 RUFY3Q7L099 469 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 TTC6Q86TZ1 520 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 FAM151AQ8WW52 585 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 CSRNP1Q96S65 589 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 LRRC2Q9BYS8 371 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 DNAJC18Q9H819 358 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 CNNM2Q9H8M5 875 aa16.67■□□□□ 0.26
GAPDH-203ENST00000396858 ORC4O43929 436 aa16.66■□□□□ 0.26
GAPDH-203ENST00000396858 KDM4AO75164 1064 aa16.66■□□□□ 0.26
GAPDH-203ENST00000396858 TNFAIP1Q13829 316 aa16.66■□□□□ 0.26
GAPDH-203ENST00000396858 RASA3Q14644 834 aa16.66■□□□□ 0.26
GAPDH-203ENST00000396858 CYB5R4Q7L1T6 521 aa16.66■□□□□ 0.26
GAPDH-203ENST00000396858 CHST3Q7LGC8 479 aa16.66■□□□□ 0.26
GAPDH-203ENST00000396858 FAM83AQ86UY5 434 aa16.66■□□□□ 0.26
GAPDH-203ENST00000396858 APOBEC3FQ8IUX4 373 aaKnown RBP16.66■□□□□ 0.26
GAPDH-203ENST00000396858 TTC14Q96N46 770 aa16.66■□□□□ 0.26
GAPDH-203ENST00000396858 DHX36Q9H2U1 1008 aaKnown RBP16.66■□□□□ 0.26
GAPDH-203ENST00000396858 PDRG1Q9NUG6 133 aa16.66■□□□□ 0.26
GAPDH-203ENST00000396858 IQCA1LA6NCM1 817 aa16.65■□□□□ 0.26
GAPDH-203ENST00000396858 POTECB2RU33 542 aa16.65■□□□□ 0.26
GAPDH-203ENST00000396858 PRC1O43663 620 aa16.65■□□□□ 0.26
GAPDH-203ENST00000396858 ST18O60284 1047 aa16.65■□□□□ 0.26
GAPDH-203ENST00000396858 PCP11498 1178 aaKnown RBP16.65■□□□□ 0.26
GAPDH-203ENST00000396858 TNNI2P48788 182 aa16.65■□□□□ 0.26
GAPDH-203ENST00000396858 GABPAQ06546 454 aa16.65■□□□□ 0.26
GAPDH-203ENST00000396858 PDE4BQ07343 736 aa16.65■□□□□ 0.26
GAPDH-203ENST00000396858 CRACR2BQ8N4Y2 399 aaPredicted RBP16.65■□□□□ 0.26
GAPDH-203ENST00000396858 KRT23Q9C075 422 aa16.65■□□□□ 0.26
GAPDH-203ENST00000396858 EHD4Q9H223 541 aa16.65■□□□□ 0.26
GAPDH-203ENST00000396858 TAF1DQ9H5J8 278 aaPredicted RBP16.65■□□□□ 0.26
GAPDH-203ENST00000396858 SERPINB13Q9UIV8 391 aa16.65■□□□□ 0.26
GAPDH-203ENST00000396858 SSC5DA1L4H1 1573 aa16.64■□□□□ 0.25
GAPDH-203ENST00000396858 RANBP6O60518 1105 aaKnown RBP16.64■□□□□ 0.25
GAPDH-203ENST00000396858 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
GAPDH-203ENST00000396858 FGRP09769 529 aa16.64■□□□□ 0.25
GAPDH-203ENST00000396858 RASA1P20936 1047 aa16.64■□□□□ 0.25
GAPDH-203ENST00000396858 CDK8P49336 464 aa16.64■□□□□ 0.25
GAPDH-203ENST00000396858 AK2P54819 239 aa16.64■□□□□ 0.25
GAPDH-203ENST00000396858 EAPPQ56P03 285 aaPredicted RBP16.64■□□□□ 0.25
GAPDH-203ENST00000396858 DHX32Q7L7V1 743 aaKnown RBP16.64■□□□□ 0.25
GAPDH-203ENST00000396858 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
GAPDH-203ENST00000396858 ESR2Q92731 530 aa16.64■□□□□ 0.25
GAPDH-203ENST00000396858 MYH8P13535 1937 aa16.64■□□□□ 0.25
GAPDH-203ENST00000396858 PITPNM2Q9BZ72 1349 aa16.64■□□□□ 0.25
GAPDH-203ENST00000396858 MCM5P33992 734 aa16.63■□□□□ 0.25
GAPDH-203ENST00000396858 SHMT1P34896 483 aa16.63■□□□□ 0.25
GAPDH-203ENST00000396858 FAM47AQ5JRC9 791 aa16.63■□□□□ 0.25
GAPDH-203ENST00000396858 USP50Q70EL3 339 aaPredicted RBP16.63■□□□□ 0.25
GAPDH-203ENST00000396858 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
GAPDH-203ENST00000396858 TRIM34Q9BYJ4 488 aa16.63■□□□□ 0.25
GAPDH-203ENST00000396858 DEFB129Q9H1M3 183 aa16.63■□□□□ 0.25
GAPDH-203ENST00000396858 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
GAPDH-203ENST00000396858 GPHNQ9NQX3 736 aaPredicted RBP16.63■□□□□ 0.25
GAPDH-203ENST00000396858 PI4KBQ9UBF8 816 aa16.63■□□□□ 0.25
GAPDH-203ENST00000396858 ADM5C9JUS6 153 aa16.62■□□□□ 0.25
GAPDH-203ENST00000396858 EXOSC10Q01780 885 aaKnown RBP16.62■□□□□ 0.25
GAPDH-203ENST00000396858 TOB2Q14106 344 aaPredicted RBP16.62■□□□□ 0.25
GAPDH-203ENST00000396858 Q6ZUG5 572 aa16.62■□□□□ 0.25
GAPDH-203ENST00000396858 TEPSINQ96N21 525 aa16.62■□□□□ 0.25
GAPDH-203ENST00000396858 ZKSCAN3Q9BRR0 538 aa16.62■□□□□ 0.25
GAPDH-203ENST00000396858 LARP6Q9BRS8 491 aaKnown RBP16.62■□□□□ 0.25
GAPDH-203ENST00000396858 TBC1D2Q9BYX2 928 aa16.62■□□□□ 0.25
GAPDH-203ENST00000396858 SWAP70Q9UH65 585 aa16.62■□□□□ 0.25
GAPDH-203ENST00000396858 PGAP2Q9UHJ9 254 aa16.62■□□□□ 0.25
GAPDH-203ENST00000396858 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
GAPDH-203ENST00000396858 PLIN4Q96Q06 1357 aa16.62■□□□□ 0.25
GAPDH-203ENST00000396858 TSPY2A6NKD2 308 aa16.61■□□□□ 0.25
GAPDH-203ENST00000396858 SH2B2O14492 632 aaPredicted RBP16.61■□□□□ 0.25
GAPDH-203ENST00000396858 FGD1P98174 961 aa16.61■□□□□ 0.25
GAPDH-203ENST00000396858 BRF1Q92994 677 aa16.61■□□□□ 0.25
GAPDH-203ENST00000396858 ZNF287Q9HBT7 754 aa16.61■□□□□ 0.25
GAPDH-203ENST00000396858 ZSWIM5Q9P217 1185 aa16.61■□□□□ 0.25
GAPDH-203ENST00000396858 TNKSO95271 1327 aa16.61■□□□□ 0.25
GAPDH-203ENST00000396858 GREB1LQ9C091 1923 aaPredicted RBP16.6■□□□□ 0.25
GAPDH-203ENST00000396858 NMT2O60551 498 aa16.6■□□□□ 0.25
GAPDH-203ENST00000396858 LARGE1O95461 756 aa16.6■□□□□ 0.25
GAPDH-203ENST00000396858 POTEIP0CG38 1075 aa16.6■□□□□ 0.25
GAPDH-203ENST00000396858 POTEJP0CG39 1038 aa16.6■□□□□ 0.25
GAPDH-203ENST00000396858 AKR1B1P15121 316 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms