RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 GJD2Q9UKL4 321 aa19.68■□□□□ 0.74
SNCA-205ENST00000394991 PDS5AQ29RF7 1337 aaKnown RBP19.68■□□□□ 0.74
SNCA-205ENST00000394991 TBC1D12O60347 775 aa19.67■□□□□ 0.74
SNCA-205ENST00000394991 UBTFL1P0CB47 393 aaPredicted RBP19.67■□□□□ 0.74
SNCA-205ENST00000394991 SPP2Q13103 211 aa19.67■□□□□ 0.74
SNCA-205ENST00000394991 FRMPD3Q5JV73 1810 aa19.67■□□□□ 0.74
SNCA-205ENST00000394991 GPR75-ASB3A0A0A6YYF3 556 aa19.66■□□□□ 0.74
SNCA-205ENST00000394991 RRP1BQ14684 758 aaKnown RBP19.66■□□□□ 0.74
SNCA-205ENST00000394991 SLF2Q8IX21 1173 aa19.66■□□□□ 0.74
SNCA-205ENST00000394991 COL2A1P02458 1487 aaPredicted RBP19.66■□□□□ 0.74
SNCA-205ENST00000394991 SYN1P17600 705 aa19.65■□□□□ 0.74
SNCA-205ENST00000394991 GCLCP48506 637 aaPredicted RBP19.65■□□□□ 0.74
SNCA-205ENST00000394991 HMGCS2P54868 508 aa19.65■□□□□ 0.74
SNCA-205ENST00000394991 TIMM10P62072 90 aa19.65■□□□□ 0.74
SNCA-205ENST00000394991 MECOMQ03112 1051 aa19.65■□□□□ 0.74
SNCA-205ENST00000394991 Q7L0L9 218 aa19.65■□□□□ 0.74
SNCA-205ENST00000394991 TRIB2Q92519 343 aa19.65■□□□□ 0.74
SNCA-205ENST00000394991 OSBPL5Q9H0X9 879 aaPredicted RBP19.65■□□□□ 0.74
SNCA-205ENST00000394991 ASCC2Q9H1I8 757 aaPredicted RBP19.65■□□□□ 0.74
SNCA-205ENST00000394991 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.65■□□□□ 0.74
SNCA-205ENST00000394991 RPTORQ8N122 1335 aa19.65■□□□□ 0.74
SNCA-205ENST00000394991 NPM3O75607 178 aaKnown RBP19.64■□□□□ 0.73
SNCA-205ENST00000394991 MAGEA10P43363 369 aaPredicted RBP19.64■□□□□ 0.73
SNCA-205ENST00000394991 GPR153Q6NV75 609 aa19.64■□□□□ 0.73
SNCA-205ENST00000394991 DEFB123Q8N688 67 aa19.64■□□□□ 0.73
SNCA-205ENST00000394991 ZNF280CQ8ND82 737 aa19.64■□□□□ 0.73
SNCA-205ENST00000394991 NBPF3Q9H094 633 aa19.64■□□□□ 0.73
SNCA-205ENST00000394991 HMX1Q9NP08 348 aaPredicted RBP19.64■□□□□ 0.73
SNCA-205ENST00000394991 COPRSQ9NQ92 184 aa19.64■□□□□ 0.73
SNCA-205ENST00000394991 FOCADQ5VW36 1801 aa19.64■□□□□ 0.73
SNCA-205ENST00000394991 SPTY2D1Q68D10 685 aaPredicted RBP19.63■□□□□ 0.73
SNCA-205ENST00000394991 C11orf49Q9H6J7 331 aa19.63■□□□□ 0.73
SNCA-205ENST00000394991 OGDHLQ9ULD0 1010 aa19.63■□□□□ 0.73
SNCA-205ENST00000394991 MAST2Q6P0Q8 1798 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 PFASO15067 1338 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 A0A1B0GUL7 405 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 PEX10O60683 326 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 CAP2P40123 477 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 LRIT3Q3SXY7 679 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 ALDH1L2Q3SY69 923 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 SH3D19Q5HYK7 790 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 XAGE2Q96GT9 111 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 SMC4Q9NTJ3 1288 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 MORF4L1Q9UBU8 362 aa19.62■□□□□ 0.73
SNCA-205ENST00000394991 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.62■□□□□ 0.73
SNCA-205ENST00000394991 MYO5AQ9Y4I1 1855 aaKnown RBP19.62■□□□□ 0.73
SNCA-205ENST00000394991 E9PSI1 815 aa19.61■□□□□ 0.73
SNCA-205ENST00000394991 PABPC4Q13310 644 aaKnown RBP eCLIP19.61■□□□□ 0.73
SNCA-205ENST00000394991 MAP3K21Q5TCX8 1036 aa19.61■□□□□ 0.73
SNCA-205ENST00000394991 PI16Q6UXB8 463 aa19.61■□□□□ 0.73
SNCA-205ENST00000394991 USP17L5A8MUK1 530 aa19.6■□□□□ 0.73
SNCA-205ENST00000394991 CYP2B6P20813 491 aa19.6■□□□□ 0.73
SNCA-205ENST00000394991 SLFN5Q08AF3 891 aa19.6■□□□□ 0.73
SNCA-205ENST00000394991 TDHQ8IZJ6 230 aa19.6■□□□□ 0.73
SNCA-205ENST00000394991 NSUN4Q96CB9 384 aaKnown RBP19.6■□□□□ 0.73
SNCA-205ENST00000394991 MEIS3Q99687 375 aa19.6■□□□□ 0.73
SNCA-205ENST00000394991 TBC1D2Q9BYX2 928 aa19.6■□□□□ 0.73
SNCA-205ENST00000394991 MTMR10Q9NXD2 777 aa19.6■□□□□ 0.73
SNCA-205ENST00000394991 HMG20BQ9P0W2 317 aa19.6■□□□□ 0.73
SNCA-205ENST00000394991 STXBP5LQ9Y2K9 1186 aa19.6■□□□□ 0.73
SNCA-205ENST00000394991 PRKAR2AP13861 404 aaKnown RBP19.59■□□□□ 0.73
SNCA-205ENST00000394991 TFCP2Q12800 502 aa19.59■□□□□ 0.73
SNCA-205ENST00000394991 TBC1D9Q6ZT07 1266 aa19.59■□□□□ 0.73
SNCA-205ENST00000394991 TXNRD2Q9NNW7 524 aa19.59■□□□□ 0.73
SNCA-205ENST00000394991 JAG1P78504 1218 aa19.58■□□□□ 0.72
SNCA-205ENST00000394991 MVPQ14764 893 aaKnown RBP19.58■□□□□ 0.72
SNCA-205ENST00000394991 MAP4K4O95819 1239 aaPredicted RBP19.57■□□□□ 0.72
SNCA-205ENST00000394991 COL6A1P12109 1028 aa19.57■□□□□ 0.72
SNCA-205ENST00000394991 IRX3P78415 501 aaPredicted RBP19.57■□□□□ 0.72
SNCA-205ENST00000394991 MTMR2Q13614 643 aa19.57■□□□□ 0.72
SNCA-205ENST00000394991 SHROOM1Q2M3G4 852 aaPredicted RBP19.57■□□□□ 0.72
SNCA-205ENST00000394991 TEX11Q8IYF3 940 aa19.57■□□□□ 0.72
SNCA-205ENST00000394991 P2RX7Q99572 595 aaKnown RBP19.57■□□□□ 0.72
SNCA-205ENST00000394991 WDR18Q9BV38 432 aa19.57■□□□□ 0.72
SNCA-205ENST00000394991 UBE2OQ9C0C9 1292 aaKnown RBP19.57■□□□□ 0.72
SNCA-205ENST00000394991 AS3MTQ9HBK9 375 aa19.57■□□□□ 0.72
SNCA-205ENST00000394991 LDHCP07864 332 aa19.56■□□□□ 0.72
SNCA-205ENST00000394991 GSTO1P78417 241 aa19.56■□□□□ 0.72
SNCA-205ENST00000394991 SPATA5Q8NB90 893 aa19.56■□□□□ 0.72
SNCA-205ENST00000394991 SH3RF3Q8TEJ3 882 aaPredicted RBP19.56■□□□□ 0.72
SNCA-205ENST00000394991 CDCA7LQ96GN5 454 aa19.56■□□□□ 0.72
SNCA-205ENST00000394991 NUDT12Q9BQG2 462 aa19.56■□□□□ 0.72
SNCA-205ENST00000394991 DNAJC18Q9H819 358 aa19.56■□□□□ 0.72
SNCA-205ENST00000394991 HERC5Q9UII4 1024 aaKnown RBP19.56■□□□□ 0.72
SNCA-205ENST00000394991 NOB1Q9ULX3 412 aaKnown RBP19.56■□□□□ 0.72
SNCA-205ENST00000394991 AKAP2Q9Y2D5 859 aa19.56■□□□□ 0.72
SNCA-205ENST00000394991 UNC80Q8N2C7 3258 aa19.56■□□□□ 0.72
SNCA-205ENST00000394991 XRCC5P13010 732 aaKnown RBP19.55■□□□□ 0.72
SNCA-205ENST00000394991 HOXA7P31268 230 aaPredicted RBP19.55■□□□□ 0.72
SNCA-205ENST00000394991 BACE1P56817 501 aa19.55■□□□□ 0.72
SNCA-205ENST00000394991 HERVK_113P62684 666 aa19.55■□□□□ 0.72
SNCA-205ENST00000394991 CACNB2Q08289 660 aaPredicted RBP19.55■□□□□ 0.72
SNCA-205ENST00000394991 POTEDQ86YR6 584 aa19.55■□□□□ 0.72
SNCA-205ENST00000394991 SOCS4Q8WXH5 440 aa19.55■□□□□ 0.72
SNCA-205ENST00000394991 USP6NLQ92738 828 aa19.55■□□□□ 0.72
SNCA-205ENST00000394991 RAI14Q9P0K7 980 aa19.55■□□□□ 0.72
SNCA-205ENST00000394991 LTBP2Q14767 1821 aa19.54■□□□□ 0.72
SNCA-205ENST00000394991 ARID4AP29374 1257 aaPredicted RBP19.54■□□□□ 0.72
SNCA-205ENST00000394991 CCND3P30281 292 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms