RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CSADQ9Y600 493 aa23.94■■□□□ 1.42
SNCA-203ENST00000394986 SNCAIPQ9Y6H5 919 aa23.94■■□□□ 1.42
SNCA-203ENST00000394986 SIPA1L1O43166 1804 aa23.94■■□□□ 1.42
SNCA-203ENST00000394986 DDX60LQ5H9U9 1706 aaKnown RBP23.94■■□□□ 1.42
SNCA-203ENST00000394986 A0A0D9SFI3 127 aa23.93■■□□□ 1.42
SNCA-203ENST00000394986 CYP2D6P10635 497 aa23.93■■□□□ 1.42
SNCA-203ENST00000394986 GJA5P36382 358 aa23.93■■□□□ 1.42
SNCA-203ENST00000394986 THSD7BQ9C0I4 1608 aa23.93■■□□□ 1.42
SNCA-203ENST00000394986 UNCXA6NJT0 531 aa23.93■■□□□ 1.42
SNCA-203ENST00000394986 HLA-DOAP06340 250 aa23.93■■□□□ 1.42
SNCA-203ENST00000394986 PLCD1P51178 756 aa23.93■■□□□ 1.42
SNCA-203ENST00000394986 NOGQ13253 232 aa23.93■■□□□ 1.42
SNCA-203ENST00000394986 NMIQ13287 307 aaPredicted RBP23.93■■□□□ 1.42
SNCA-203ENST00000394986 ERICH6BQ5W0A0 696 aa23.93■■□□□ 1.42
SNCA-203ENST00000394986 WNK4Q96J92 1243 aa23.93■■□□□ 1.42
SNCA-203ENST00000394986 NAV1Q8NEY1 1877 aa23.92■■□□□ 1.42
SNCA-203ENST00000394986 TBC1D12O60347 775 aa23.92■■□□□ 1.42
SNCA-203ENST00000394986 POLR3DP05423 398 aaPredicted RBP23.92■■□□□ 1.42
SNCA-203ENST00000394986 SDSP20132 328 aa23.92■■□□□ 1.42
SNCA-203ENST00000394986 KIF23Q02241 960 aaPredicted RBP23.92■■□□□ 1.42
SNCA-203ENST00000394986 RRP1BQ14684 758 aaKnown RBP23.92■■□□□ 1.42
SNCA-203ENST00000394986 SPRYD7Q5W111 196 aa23.92■■□□□ 1.42
SNCA-203ENST00000394986 CRACR2BQ8N4Y2 399 aaPredicted RBP23.92■■□□□ 1.42
SNCA-203ENST00000394986 OPTNQ96CV9 577 aa23.92■■□□□ 1.42
SNCA-203ENST00000394986 ATP8A2Q9NTI2 1148 aa23.92■■□□□ 1.42
SNCA-203ENST00000394986 CYP2D7A0A087X1C5 515 aa23.91■■□□□ 1.42
SNCA-203ENST00000394986 GSG1L2A8MUP6 293 aa23.91■■□□□ 1.42
SNCA-203ENST00000394986 SMIM22K7EJ46 135 aa23.91■■□□□ 1.42
SNCA-203ENST00000394986 EPB41L4AQ9HCS5 686 aaPredicted RBP23.91■■□□□ 1.42
SNCA-203ENST00000394986 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.91■■□□□ 1.42
SNCA-203ENST00000394986 HERC5Q9UII4 1024 aaKnown RBP23.91■■□□□ 1.42
SNCA-203ENST00000394986 MAP2K2P36507 400 aa23.9■■□□□ 1.42
SNCA-203ENST00000394986 TTC6Q86TZ1 520 aa23.9■■□□□ 1.42
SNCA-203ENST00000394986 METTL16Q86W50 562 aaKnown RBP23.9■■□□□ 1.42
SNCA-203ENST00000394986 OTUD5Q96G74 571 aa23.9■■□□□ 1.42
SNCA-203ENST00000394986 TRIM34Q9BYJ4 488 aa23.9■■□□□ 1.42
SNCA-203ENST00000394986 NOL9Q5SY16 702 aaKnown RBP23.89■■□□□ 1.41
SNCA-203ENST00000394986 HELLSQ9NRZ9 838 aa23.89■■□□□ 1.41
SNCA-203ENST00000394986 PCNTO95613 3336 aa23.88■■□□□ 1.41
SNCA-203ENST00000394986 MYH1P12882 1939 aa23.88■■□□□ 1.41
SNCA-203ENST00000394986 SPDYE5A6NIY4 337 aa23.88■■□□□ 1.41
SNCA-203ENST00000394986 USP17L12C9JPN9 530 aa23.88■■□□□ 1.41
SNCA-203ENST00000394986 USP17L21D6R901 530 aa23.88■■□□□ 1.41
SNCA-203ENST00000394986 SHROOM1Q2M3G4 852 aaPredicted RBP23.88■■□□□ 1.41
SNCA-203ENST00000394986 ZNF589Q86UQ0 364 aaPredicted RBP23.88■■□□□ 1.41
SNCA-203ENST00000394986 FOXP4Q8IVH2 680 aaPredicted RBP23.88■■□□□ 1.41
SNCA-203ENST00000394986 SCYL3Q8IZE3 742 aa23.88■■□□□ 1.41
SNCA-203ENST00000394986 SERPINB13Q9UIV8 391 aa23.88■■□□□ 1.41
SNCA-203ENST00000394986 APPP05067 770 aa23.87■■□□□ 1.41
SNCA-203ENST00000394986 GNAT2P19087 354 aa23.87■■□□□ 1.41
SNCA-203ENST00000394986 CTR9Q6PD62 1173 aa23.87■■□□□ 1.41
SNCA-203ENST00000394986 CCDC84Q86UT8 332 aaPredicted RBP23.87■■□□□ 1.41
SNCA-203ENST00000394986 DDRGK1Q96HY6 314 aa23.87■■□□□ 1.41
SNCA-203ENST00000394986 EHD4Q9H223 541 aa23.87■■□□□ 1.41
SNCA-203ENST00000394986 DIAPH3Q9NSV4 1193 aa23.87■■□□□ 1.41
SNCA-203ENST00000394986 FOXP2O15409 715 aa23.86■■□□□ 1.41
SNCA-203ENST00000394986 CTNND1O60716 968 aaKnown RBP23.86■■□□□ 1.41
SNCA-203ENST00000394986 GDF11O95390 407 aa23.86■■□□□ 1.41
SNCA-203ENST00000394986 ZBTB48P10074 688 aaPredicted RBP23.86■■□□□ 1.41
SNCA-203ENST00000394986 JAG1P78504 1218 aa23.86■■□□□ 1.41
SNCA-203ENST00000394986 MCMDC2Q4G0Z9 681 aa23.86■■□□□ 1.41
SNCA-203ENST00000394986 VPS53Q5VIR6 699 aa23.86■■□□□ 1.41
SNCA-203ENST00000394986 CWC27Q6UX04 472 aaKnown RBP23.86■■□□□ 1.41
SNCA-203ENST00000394986 TICAM2Q86XR7 235 aa23.86■■□□□ 1.41
SNCA-203ENST00000394986 ERO1BQ86YB8 467 aa23.86■■□□□ 1.41
SNCA-203ENST00000394986 DYNLL2Q96FJ2 89 aa23.86■■□□□ 1.41
SNCA-203ENST00000394986 PATL2C9JE40 543 aaKnown RBP23.85■■□□□ 1.41
SNCA-203ENST00000394986 C12orf60Q5U649 245 aa23.85■■□□□ 1.41
SNCA-203ENST00000394986 SLC44A5Q8NCS7 719 aa23.85■■□□□ 1.41
SNCA-203ENST00000394986 SHMT1P34896 483 aa23.84■■□□□ 1.41
SNCA-203ENST00000394986 TDO2P48775 406 aa23.84■■□□□ 1.41
SNCA-203ENST00000394986 GABPAQ06546 454 aa23.84■■□□□ 1.41
SNCA-203ENST00000394986 IFNL3Q8IZI9 196 aa23.84■■□□□ 1.41
SNCA-203ENST00000394986 PICK1Q9NRD5 415 aa23.84■■□□□ 1.41
SNCA-203ENST00000394986 ARPP21Q9UBL0 812 aaPredicted RBP23.84■■□□□ 1.41
SNCA-203ENST00000394986 IRF6O14896 467 aa23.84■■□□□ 1.41
SNCA-203ENST00000394986 HSPA1AP0DMV8 641 aaKnown RBP23.84■■□□□ 1.41
SNCA-203ENST00000394986 HSPA1BP0DMV9 641 aaKnown RBP23.84■■□□□ 1.41
SNCA-203ENST00000394986 PTPRAP18433 802 aa23.84■■□□□ 1.41
SNCA-203ENST00000394986 CAP2P40123 477 aa23.84■■□□□ 1.41
SNCA-203ENST00000394986 GIMAP6Q6P9H5 292 aa23.84■■□□□ 1.41
SNCA-203ENST00000394986 IL25Q9H293 177 aa23.84■■□□□ 1.41
SNCA-203ENST00000394986 WBP1LQ9NX94 342 aa23.84■■□□□ 1.41
SNCA-203ENST00000394986 BAZ2AQ9UIF9 1905 aaKnown RBP23.84■■□□□ 1.41
SNCA-203ENST00000394986 HIP1O00291 1037 aa23.83■■□□□ 1.4
SNCA-203ENST00000394986 MAP2K1Q02750 393 aaPredicted RBP23.83■■□□□ 1.4
SNCA-203ENST00000394986 PPIL2Q13356 520 aa23.83■■□□□ 1.4
SNCA-203ENST00000394986 TATDN1Q6P1N9 297 aa23.83■■□□□ 1.4
SNCA-203ENST00000394986 AMOTL1Q8IY63 956 aa23.83■■□□□ 1.4
SNCA-203ENST00000394986 STK11IPQ8N1F8 1099 aa23.83■■□□□ 1.4
SNCA-203ENST00000394986 CCDC171Q6TFL3 1326 aa23.82■■□□□ 1.4
SNCA-203ENST00000394986 MINDY4BA8MYZ0 360 aa23.82■■□□□ 1.4
SNCA-203ENST00000394986 PPATQ06203 517 aa23.82■■□□□ 1.4
SNCA-203ENST00000394986 ZHX2Q9Y6X8 837 aa23.82■■□□□ 1.4
SNCA-203ENST00000394986 SBK1Q52WX2 424 aa23.81■■□□□ 1.4
SNCA-203ENST00000394986 MS4A4AQ96JQ5 239 aa23.81■■□□□ 1.4
SNCA-203ENST00000394986 NACAP1Q9BZK3 213 aa23.81■■□□□ 1.4
SNCA-203ENST00000394986 NAPBQ9H115 298 aa23.81■■□□□ 1.4
SNCA-203ENST00000394986 DOCK1Q14185 1865 aa23.81■■□□□ 1.4
SNCA-203ENST00000394986 MANSC4A6NHS7 340 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms