RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 CKAP2LQ8IYA6 745 aa16.31■□□□□ 0.2
PPP3CA-202ENST00000394853 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
PPP3CA-202ENST00000394853 ZNF384Q8TF68 577 aa16.31■□□□□ 0.2
PPP3CA-202ENST00000394853 VEZTQ9HBM0 779 aa16.31■□□□□ 0.2
PPP3CA-202ENST00000394853 CDC27P30260 824 aa16.31■□□□□ 0.2
PPP3CA-202ENST00000394853 GPSM2P81274 684 aa16.31■□□□□ 0.2
PPP3CA-202ENST00000394853 MKNK2Q9HBH9 465 aa16.31■□□□□ 0.2
PPP3CA-202ENST00000394853 DACT1Q9NYF0 836 aa16.31■□□□□ 0.2
PPP3CA-202ENST00000394853 CCDC93Q567U6 631 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 APOA5Q6Q788 366 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 FBXO33Q7Z6M2 555 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 CRACR2BQ8N4Y2 399 aaPredicted RBP16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 MECOMQ03112 1051 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 GNL2Q13823 731 aaKnown RBP16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 PGBD1Q96JS3 809 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 USP28Q96RU2 1077 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 GOLGA8AA7E2F4 631 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 ZBTB43O43298 467 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 RANBP6O60518 1105 aaKnown RBP16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 PPARAQ07869 468 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 IGDCC4Q8TDY8 1250 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 SLC12A7Q9Y666 1083 aa16.3■□□□□ 0.2
PPP3CA-202ENST00000394853 SALL1Q9NSC2 1324 aa16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 ZSCAN16Q9H4T2 348 aaPredicted RBP16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 RRAGDQ9NQL2 400 aaPredicted RBP16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 ZNF277Q9NRM2 450 aaPredicted RBP16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 HDAC9Q9UKV0 1011 aa16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 TTF2Q9UNY4 1162 aaKnown RBP16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 GNAT2P19087 354 aa16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 GSTO1P78417 241 aa16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 ALX1Q15699 326 aa16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 TMC4Q7Z404 712 aa16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 ZNF830Q96NB3 372 aaPredicted RBP16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 LY9Q9HBG7 655 aa16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 BCORQ6W2J9 1755 aa16.29■□□□□ 0.2
PPP3CA-202ENST00000394853 EVCP57679 992 aa16.28■□□□□ 0.2
PPP3CA-202ENST00000394853 CRNKL1Q9BZJ0 848 aaKnown RBP16.28■□□□□ 0.2
PPP3CA-202ENST00000394853 EIF6P56537 245 aaKnown RBP16.28■□□□□ 0.2
PPP3CA-202ENST00000394853 THSD7AQ9UPZ6 1657 aa16.28■□□□□ 0.2
PPP3CA-202ENST00000394853 SART3Q15020 963 aaKnown RBP16.28■□□□□ 0.2
PPP3CA-202ENST00000394853 CRAMP1Q96RY5 1269 aa16.28■□□□□ 0.2
PPP3CA-202ENST00000394853 RIOK1Q9BRS2 568 aaKnown RBP16.28■□□□□ 0.2
PPP3CA-202ENST00000394853 MPHOSPH10O00566 681 aaKnown RBP16.27■□□□□ 0.2
PPP3CA-202ENST00000394853 NR1I2O75469 434 aa16.27■□□□□ 0.2
PPP3CA-202ENST00000394853 SRGNP10124 158 aa16.27■□□□□ 0.2
PPP3CA-202ENST00000394853 NSUN4Q96CB9 384 aaKnown RBP16.27■□□□□ 0.2
PPP3CA-202ENST00000394853 CFAP45Q9UL16 551 aa16.27■□□□□ 0.2
PPP3CA-202ENST00000394853 AOC3Q16853 763 aa16.27■□□□□ 0.2
PPP3CA-202ENST00000394853 MCM9Q9NXL9 1143 aa16.27■□□□□ 0.2
PPP3CA-202ENST00000394853 USP17L12C9JPN9 530 aa16.27■□□□□ 0.19
PPP3CA-202ENST00000394853 USP17L21D6R901 530 aa16.27■□□□□ 0.19
PPP3CA-202ENST00000394853 ME1P48163 572 aa16.27■□□□□ 0.19
PPP3CA-202ENST00000394853 ALG1Q9BT22 464 aa16.27■□□□□ 0.19
PPP3CA-202ENST00000394853 SLC26A6Q9BXS9 759 aa16.27■□□□□ 0.19
PPP3CA-202ENST00000394853 KRT23Q9C075 422 aa16.27■□□□□ 0.19
PPP3CA-202ENST00000394853 NUP62CLQ9H1M0 184 aa16.27■□□□□ 0.19
PPP3CA-202ENST00000394853 PRDM16Q9HAZ2 1276 aa16.27■□□□□ 0.19
PPP3CA-202ENST00000394853 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 WTAPQ15007 396 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 SP8Q8IXZ3 490 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 FBXL16Q8N461 479 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 TMEM87BQ96K49 555 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 MYO1BO43795 1136 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 AKAP17AQ02040 695 aaKnown RBP16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 CPLX2Q6PUV4 134 aaKnown RBP16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 UBAC1Q9BSL1 405 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 DIXDC1Q155Q3 683 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 FBXO18Q8NFZ0 1043 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 CNNM2Q9H8M5 875 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 NHSQ6T4R5 1651 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 ZMYM6O95789 1325 aa16.26■□□□□ 0.19
PPP3CA-202ENST00000394853 IKQ13123 557 aaPredicted RBP16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 GRIK5Q16478 980 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 RTKN2Q8IZC4 609 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 TNMDQ9H2S6 317 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 ATP6V0A2Q9Y487 856 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 KIF28PB7ZC32 967 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 CYP2D6P10635 497 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 IARSP41252 1262 aaKnown RBP16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 TCP10Q12799 353 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 TAOK3Q9H2K8 898 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 CD209Q9NNX6 404 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 TEX11Q8IYF3 940 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 ZNF444Q8N0Y2 327 aaPredicted RBP16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 TBC1D16Q8TBP0 767 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 STAG1Q8WVM7 1258 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 ELP1O95163 1332 aa16.25■□□□□ 0.19
PPP3CA-202ENST00000394853 C4BP0C0L5 1744 aa16.24■□□□□ 0.19
PPP3CA-202ENST00000394853 hCG_1642624A0A1W2PR95 340 aa16.24■□□□□ 0.19
PPP3CA-202ENST00000394853 SF3A1Q15459 793 aaKnown RBP16.24■□□□□ 0.19
PPP3CA-202ENST00000394853 CC2D2BQ6DHV5 1058 aa16.24■□□□□ 0.19
PPP3CA-202ENST00000394853 SAP30BPQ9UHR5 308 aaKnown RBP16.24■□□□□ 0.19
PPP3CA-202ENST00000394853 ZHX1Q9UKY1 873 aaPredicted RBP16.24■□□□□ 0.19
PPP3CA-202ENST00000394853 TBC1D22AQ8WUA7 517 aa16.24■□□□□ 0.19
PPP3CA-202ENST00000394853 USP25Q9UHP3 1055 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms