RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ALG1Q9BT22 464 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 PLA2G12BQ9BX93 195 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 MYO5AQ9Y4I1 1855 aaKnown RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 IFIT3O14879 490 aaKnown RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 N4BP1O75113 896 aaKnown RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 LMOD1P29536 600 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 GSDMDP57764 484 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 INTS5Q6P9B9 1019 aaKnown RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 LCORLQ8N3X6 602 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 MARCH10Q8NA82 808 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 LPIN2Q92539 896 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 EPB41L4AQ9HCS5 686 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 CCDC87Q9NVE4 849 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 SALL1Q9NSC2 1324 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 LOC102724428A0A0B4J2F2 783 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 PRDM1O75626 825 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 SLC5A1P13866 664 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 SIK1P57059 783 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 ZRSR1Q15695 479 aaKnown RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 C3orf67Q6ZVT6 689 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 STRBPQ96SI9 672 aaKnown RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 PDE11AQ9HCR9 933 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 ARFGAP3Q9NP61 516 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 GEMIN8Q9NWZ8 242 aaKnown RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 ZSWIM5Q9P217 1185 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 ANGEL1Q9UNK9 670 aaKnown RBP11.41□□□□□ -0.58
PSEN1-204ENST00000394164 TACC3Q9Y6A5 838 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 SLC4A4Q9Y6R1 1079 aa11.41□□□□□ -0.58
PSEN1-204ENST00000394164 UBR2Q8IWV8 1755 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 CYP2D7A0A087X1C5 515 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 IL6STP40189 918 aaPredicted RBP11.4□□□□□ -0.58
PSEN1-204ENST00000394164 ZNF34Q8IZ26 560 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 IFNL3Q8IZI9 196 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.4□□□□□ -0.58
PSEN1-204ENST00000394164 CLIC6Q96NY7 704 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 PARD6BQ9BYG5 372 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 ANO10Q9NW15 660 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 ACTN2P35609 894 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 FAM160A1Q05DH4 1040 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 DPCR1Q3MIW9 517 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 SUGCTQ9HAC7 445 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 RAI14Q9P0K7 980 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 KCNJ14Q9UNX9 436 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 CDHR2Q9BYE9 1310 aa11.4□□□□□ -0.58
PSEN1-204ENST00000394164 SHANK3Q9BYB0 1731 aa11.4□□□□□ -0.59
PSEN1-204ENST00000394164 GOLGA8AA7E2F4 631 aa11.39□□□□□ -0.59
PSEN1-204ENST00000394164 SPTLC2O15270 562 aa11.39□□□□□ -0.59
PSEN1-204ENST00000394164 IGHMBP2P38935 993 aaKnown RBP11.39□□□□□ -0.59
PSEN1-204ENST00000394164 MAP3K12Q12852 859 aa11.39□□□□□ -0.59
PSEN1-204ENST00000394164 TTF1Q15361 905 aaPredicted RBP11.39□□□□□ -0.59
PSEN1-204ENST00000394164 MYSM1Q5VVJ2 828 aa11.39□□□□□ -0.59
PSEN1-204ENST00000394164 APOA5Q6Q788 366 aa11.39□□□□□ -0.59
PSEN1-204ENST00000394164 SLC51AQ86UW1 340 aa11.39□□□□□ -0.59
PSEN1-204ENST00000394164 MRPS27Q92552 414 aaKnown RBP11.39□□□□□ -0.59
PSEN1-204ENST00000394164 ZBTB43O43298 467 aa11.39□□□□□ -0.59
PSEN1-204ENST00000394164 GUCY1A2P33402 732 aa11.39□□□□□ -0.59
PSEN1-204ENST00000394164 EIF5P55010 431 aaKnown RBP11.39□□□□□ -0.59
PSEN1-204ENST00000394164 GNG11P61952 73 aa11.39□□□□□ -0.59
PSEN1-204ENST00000394164 FAM98CQ17RN3 349 aaKnown RBP11.39□□□□□ -0.59
PSEN1-204ENST00000394164 LINC00301Q8NCQ3 95 aa11.39□□□□□ -0.59
PSEN1-204ENST00000394164 EIF3CLB5ME19 914 aaKnown RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 NRDCO43847 1150 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 ATP1A3P13637 1013 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 EVX2Q03828 476 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 CHRNDQ07001 517 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 NOM1Q5C9Z4 860 aaKnown RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 KRT40Q6A162 431 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 ADGRA1Q86SQ6 560 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 WDR24Q96S15 920 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 MYCBPQ99417 103 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 EIF3CQ99613 913 aaKnown RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 PARP3Q9Y6F1 533 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 BAZ2BQ9UIF8 2168 aaKnown RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 STRCQ7RTU9 1775 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 TCRBV5S4A2TA0A5A2 114 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 WDHD1O75717 1129 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 CHRM1P11229 460 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 KIF23Q02241 960 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 PPP2R3AQ06190 1150 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 ERFEQ4G0M1 354 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 TRIM65Q6PJ69 517 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 VPS37DQ86XT2 251 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 FUT8Q9BYC5 575 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 YY1AP1Q9H869 796 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 SLC12A7Q9Y666 1083 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 NWD2Q9ULI1 1742 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 EFCAB8A8MWE9 144 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 SH2B2O14492 632 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 RANBP6O60518 1105 aaKnown RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 CYP7A1P22680 504 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 GUCY2CP25092 1073 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 IARSP41252 1262 aaKnown RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 LONRF2Q1L5Z9 754 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 CCDC150Q8NCX0 1101 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 ENGASEQ8NFI3 743 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 PUF60Q9UHX1 559 aaKnown RBP11.38□□□□□ -0.59
PSEN1-204ENST00000394164 FAN1Q9Y2M0 1017 aa11.38□□□□□ -0.59
PSEN1-204ENST00000394164 PSDA5PKW4 1024 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms