RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.38□□□□□ -1.55
GTDC1-205ENST00000392871 PCDH11XQ9BZA7 1347 aa5.38□□□□□ -1.55
GTDC1-205ENST00000392871 PCDH11YQ9BZA8 1340 aa5.38□□□□□ -1.55
GTDC1-205ENST00000392871 SLIT2O94813 1529 aa5.38□□□□□ -1.55
GTDC1-205ENST00000392871 LAMB4A4D0S4 1761 aa5.38□□□□□ -1.55
GTDC1-205ENST00000392871 GOLGA6L22H0YM25 854 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 GLRX3O76003 335 aaKnown RBP5.37□□□□□ -1.55
GTDC1-205ENST00000392871 IFIT2P09913 472 aaKnown RBP5.37□□□□□ -1.55
GTDC1-205ENST00000392871 ATP2B1P20020 1258 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 ANAPC15P60006 121 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 ST3GAL1Q11201 340 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 NMIQ13287 307 aaPredicted RBP5.37□□□□□ -1.55
GTDC1-205ENST00000392871 GCKRQ14397 625 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 SH3PXD2AQ5TCZ1 1133 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 PRPF40BQ6NWY9 871 aaKnown RBP5.37□□□□□ -1.55
GTDC1-205ENST00000392871 NKX2-3Q8TAU0 364 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 TTC14Q96N46 770 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 BOLA2Q9H3K6 86 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 TMEM63CQ9P1W3 806 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 STIM2Q9P246 746 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.37□□□□□ -1.55
GTDC1-205ENST00000392871 TCHHQ07283 1943 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 TJP1Q07157 1748 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 SHANK3Q9BYB0 1731 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 PARP4Q9UKK3 1724 aaKnown RBP5.37□□□□□ -1.55
GTDC1-205ENST00000392871 UTYO14607 1347 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 SPATA31A1Q5TZJ5 1347 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 SPATA31A6Q5VVP1 1343 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 LRP6O75581 1613 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 DISP2A7MBM2 1401 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 TOGARAM1Q9Y4F4 1720 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 EIF5BO60841 1220 aaKnown RBP5.37□□□□□ -1.55
GTDC1-205ENST00000392871 S1PR4O95977 384 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 INHAP05111 366 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 CASTP20810 708 aaKnown RBP5.37□□□□□ -1.55
GTDC1-205ENST00000392871 PPP1R18Q6NYC8 613 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 NBPF10Q6P3W6 841 aaKnown RBP5.37□□□□□ -1.55
GTDC1-205ENST00000392871 NBPF15Q8N660 670 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 NGLY1Q96IV0 654 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 JAKMIP1Q96N16 626 aaKnown RBP5.37□□□□□ -1.55
GTDC1-205ENST00000392871 C2orf49Q9BVC5 232 aaPredicted RBP5.37□□□□□ -1.55
GTDC1-205ENST00000392871 CYLDQ9NQC7 956 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 TTC41PQ6P2S7 1318 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 COL15A1P39059 1388 aa5.37□□□□□ -1.55
GTDC1-205ENST00000392871 BCL9LQ86UU0 1499 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 PPP1R12BO60237 982 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 GADD45BO75293 160 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 DDX58O95786 925 aaKnown RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 ORC1Q13415 861 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 SKOR2Q2VWA4 1001 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 TTLL7Q6ZT98 887 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 ANKRD13DQ6ZTN6 518 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 ZNF589Q86UQ0 364 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 ANKRD13AQ8IZ07 590 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 TTC5Q8N0Z6 440 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 IL17RAQ96F46 866 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 METTL22Q9BUU2 404 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 DBNLQ9UJU6 430 aaKnown RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 POLIQ9UNA4 740 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 SPATA31A5Q5VU36 1347 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 SPATA31A7Q8IWB4 1347 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 NUP188Q5SRE5 1749 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 KCPQ6ZWJ8 1503 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 SYCE3A1L190 88 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 RFX5P48382 616 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 NASPP49321 788 aaPredicted RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 CABP4P57796 275 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 TFCP2Q12800 502 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 G3BP1Q13283 466 aaKnown RBP eCLIP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 ENOX2Q16206 610 aaKnown RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 HSP90AB4PQ58FF6 505 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 SLC9A9Q8IVB4 645 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 CCDC83Q8IWF9 413 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 ETFBKMTQ8IXQ9 262 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 NECAB1Q8N987 351 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 VTI1AQ96AJ9 217 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 DMRTB1Q96MA1 342 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 CITED4Q96RK1 184 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 RBSNQ9H1K0 784 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 METTL5Q9NRN9 209 aaKnown RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 RAB6BQ9NRW1 208 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 THRAP3Q9Y2W1 955 aaKnown RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 RBM8AQ9Y5S9 174 aaKnown RBP5.36□□□□□ -1.55
GTDC1-205ENST00000392871 CCDC171Q6TFL3 1326 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 UBR2Q8IWV8 1755 aa5.36□□□□□ -1.55
GTDC1-205ENST00000392871 A6NHS1 94 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 SNRPA1P09661 255 aaKnown RBP5.35□□□□□ -1.55
GTDC1-205ENST00000392871 FOXK2Q01167 660 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 NEXNQ0ZGT2 675 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 CC2D2BQ6DHV5 1058 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 CCDC129Q6ZRS4 1044 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 KIAA1211Q6ZU35 1233 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 SLC43A3Q8NBI5 491 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 FSD1Q9BTV5 496 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 ZSWIM4Q9H7M6 989 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 MED23Q9ULK4 1368 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 PAPPAQ13219 1627 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 PLCH1Q4KWH8 1693 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 A0A087WZG4 1122 aa5.35□□□□□ -1.55
GTDC1-205ENST00000392871 ERVV-2B6SEH9 535 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms