RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 PDE4BQ07343 736 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 ZNF252P-AS1Q0IIN9 211 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 CCDC85BQ15834 202 aaPredicted RBP2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 ZNF792Q3KQV3 632 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 ZBTB37Q5TC79 503 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 PCNX4Q63HM2 1172 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 SLC23A3Q6PIS1 610 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 ATG4DQ86TL0 474 aaPredicted RBP2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 C12orf40Q86WS4 652 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 HID1Q8IV36 788 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 PLD6Q8N2A8 252 aaKnown RBP2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 FAM181AQ8N9Y4 354 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 MFSD2AQ8NA29 543 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 C3orf58Q8NDZ4 430 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 TRAIPQ9BWF2 469 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 FAM53CQ9NYF3 392 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 MAPK8IP1Q9UQF2 711 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 PCDHGC5Q9Y5F6 944 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 SNCAIPQ9Y6H5 919 aa2.41□□□□□ -2.02
SNORD28B-201ENST00000390993 FARP2O94887 1054 aaPredicted RBP2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 BPNT1O95861 308 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 ITGB5P18084 799 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 BMP6P22004 513 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 AFMP43652 599 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 BNIP3Q12983 259 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 PSMD2Q13200 908 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 WIPI1Q5MNZ9 446 aaPredicted RBP2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 SFRP5Q5T4F7 317 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 TTBK2Q6IQ55 1244 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 CBLL1Q75N03 491 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 AEBP1Q8IUX7 1158 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 KSR1Q8IVT5 923 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 SHISA5Q8N114 240 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 GRIN3AQ8TCU5 1115 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 TMEM40Q8WWA1 233 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 FAM168AQ92567 244 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 OSBPL7Q9BZF2 842 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 MIR1-1HGQ9H1L0 117 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 MRS2Q9HD23 443 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 LMCD1Q9NZU5 365 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 TACC3Q9Y6A5 838 aa2.4□□□□□ -2.03
SNORD28B-201ENST00000390993 LEFTY1O75610 366 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 NEFMP07197 916 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 P4HBP07237 508 aaKnown RBP2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 CELA3AP09093 270 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 CD8BP10966 210 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 RAC2P15153 192 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 ERCC3P19447 782 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 ETV3P41162 512 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 KIR3DL1P43629 444 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 YARSP54577 528 aaKnown RBP2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 OXCT1P55809 520 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 ZP2Q05996 745 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 PWP1Q13610 501 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 MLECQ14165 292 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 TSNAXIP1Q2TAA8 658 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 ZNF574Q6ZN55 896 aaPredicted RBP2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 SND1Q7KZF4 910 aaKnown RBP eCLIP2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 ARMCX6Q7L4S7 300 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 SPRED2Q7Z698 418 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 NPAS4Q8IUM7 802 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 MFSD4AQ8N468 514 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 POU5F2Q8N7G0 328 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 STK35Q8TDR2 534 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 PLPPR2Q96GM1 343 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 MIPEPQ99797 713 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 WNT10AQ9GZT5 417 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 KCNH3Q9ULD8 1083 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 WWC3Q9ULE0 1092 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 AK5Q9Y6K8 562 aa2.39□□□□□ -2.03
SNORD28B-201ENST00000390993 PAGE1O75459 146 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 RNASE1P07998 156 aaKnown RBP2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 CAP2P40123 477 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 LIG3P49916 1009 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 RING1Q06587 406 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 FZD5Q13467 585 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 KCNMB1Q16558 191 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 MAP3K11Q16584 847 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 TMEM67Q5HYA8 995 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 CDKAL1Q5VV42 579 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 OGFOD2Q6N063 350 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 LETMD1Q6P1Q0 360 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 MPZL3Q6UWV2 235 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 CYFIP1Q7L576 1253 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 THAP5Q7Z6K1 395 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 ZSWIM9Q86XI8 627 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 RELL1Q8IUW5 271 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 FAM84AQ96KN4 292 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 PPP1R16BQ96T49 567 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 DUSP9Q99956 384 aaKnown RBP2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 NOC4LQ9BVI4 516 aaKnown RBP2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 ASCC2Q9H1I8 757 aaPredicted RBP2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 TNKS2Q9H2K2 1166 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 TRIT1Q9H3H1 467 aaKnown RBP2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 CACNA2D2Q9NY47 1150 aa2.38□□□□□ -2.03
SNORD28B-201ENST00000390993 ANKRD33BA6NCL7 494 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 LRRC10BA6NIK2 292 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 PAPLNO95428 1278 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 CBX7O95931 251 aa2.37□□□□□ -2.03
SNORD28B-201ENST00000390993 EOMESO95936 686 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms