RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 SLAIN2Q9P270 581 aa24.05■■□□□ 1.44
COL23A1-201ENST00000390654 CABP5Q9NP86 173 aa24.05■■□□□ 1.44
COL23A1-201ENST00000390654 PDE8BO95263 885 aa24.04■■□□□ 1.44
COL23A1-201ENST00000390654 TDO2P48775 406 aa24.04■■□□□ 1.44
COL23A1-201ENST00000390654 SMYD4Q8IYR2 804 aaPredicted RBP24.04■■□□□ 1.44
COL23A1-201ENST00000390654 LZTFL1Q9NQ48 299 aa24.04■■□□□ 1.44
COL23A1-201ENST00000390654 ZNF142P52746 1687 aaPredicted RBP24.04■■□□□ 1.44
COL23A1-201ENST00000390654 CTSWP56202 376 aa24.04■■□□□ 1.44
COL23A1-201ENST00000390654 TMEM139Q8IV31 216 aa24.04■■□□□ 1.44
COL23A1-201ENST00000390654 SLC4A9Q96Q91 983 aa24.04■■□□□ 1.44
COL23A1-201ENST00000390654 TJP1Q07157 1748 aa24.04■■□□□ 1.44
COL23A1-201ENST00000390654 SAFBQ15424 915 aaKnown RBP eCLIP24.04■■□□□ 1.44
COL23A1-201ENST00000390654 CARD10Q9BWT7 1032 aa24.04■■□□□ 1.44
COL23A1-201ENST00000390654 GLI3P10071 1580 aa24.03■■□□□ 1.44
COL23A1-201ENST00000390654 PLA2G4AP47712 749 aa24.03■■□□□ 1.44
COL23A1-201ENST00000390654 DHX58Q96C10 678 aa24.03■■□□□ 1.44
COL23A1-201ENST00000390654 COL18A1P39060 1754 aa24.03■■□□□ 1.44
COL23A1-201ENST00000390654 CASQ1P31415 396 aa24.03■■□□□ 1.44
COL23A1-201ENST00000390654 GIGYF2Q6Y7W6 1299 aaKnown RBP24.03■■□□□ 1.44
COL23A1-201ENST00000390654 SMARCE1Q969G3 411 aa24.02■■□□□ 1.44
COL23A1-201ENST00000390654 TMEM87BQ96K49 555 aa24.02■■□□□ 1.44
COL23A1-201ENST00000390654 MED15Q96RN5 788 aa24.02■■□□□ 1.44
COL23A1-201ENST00000390654 MINDY4BA8MYZ0 360 aa24.02■■□□□ 1.44
COL23A1-201ENST00000390654 TEX33O43247 280 aa24.02■■□□□ 1.44
COL23A1-201ENST00000390654 MFSD6Q6ZSS7 791 aa24.02■■□□□ 1.44
COL23A1-201ENST00000390654 MAP3K15Q6ZN16 1313 aa24.02■■□□□ 1.44
COL23A1-201ENST00000390654 PRDM1O75626 825 aa24.02■■□□□ 1.44
COL23A1-201ENST00000390654 TTF1Q15361 905 aaPredicted RBP24.02■■□□□ 1.44
COL23A1-201ENST00000390654 UBE3CQ15386 1083 aa24.02■■□□□ 1.44
COL23A1-201ENST00000390654 TC2NQ8N9U0 490 aa24.02■■□□□ 1.44
COL23A1-201ENST00000390654 ACSBG1Q96GR2 724 aa24.02■■□□□ 1.44
COL23A1-201ENST00000390654 PHLPP2Q6ZVD8 1323 aa24.02■■□□□ 1.43
COL23A1-201ENST00000390654 KIF1AQ12756 1690 aa24.01■■□□□ 1.43
COL23A1-201ENST00000390654 ZSCAN12O43309 604 aa24.01■■□□□ 1.43
COL23A1-201ENST00000390654 TADA3O75528 432 aa24.01■■□□□ 1.43
COL23A1-201ENST00000390654 RASGRF1Q13972 1273 aa24.01■■□□□ 1.43
COL23A1-201ENST00000390654 RTN1Q16799 776 aa24.01■■□□□ 1.43
COL23A1-201ENST00000390654 LCORLQ8N3X6 602 aa24.01■■□□□ 1.43
COL23A1-201ENST00000390654 ZNF335Q9H4Z2 1342 aaPredicted RBP24.01■■□□□ 1.43
COL23A1-201ENST00000390654 SOWAHDA6NJG2 315 aa24.01■■□□□ 1.43
COL23A1-201ENST00000390654 ARHGAP6O43182 974 aa24.01■■□□□ 1.43
COL23A1-201ENST00000390654 MDM2Q00987 491 aaPredicted RBP24.01■■□□□ 1.43
COL23A1-201ENST00000390654 CSRNP2Q9H175 543 aa24.01■■□□□ 1.43
COL23A1-201ENST00000390654 SLC4A4Q9Y6R1 1079 aa24.01■■□□□ 1.43
COL23A1-201ENST00000390654 TCRBV5S4A2TA0A5A2 114 aa24■■□□□ 1.43
COL23A1-201ENST00000390654 MMP1P03956 469 aa24■■□□□ 1.43
COL23A1-201ENST00000390654 SPATA5Q8NB90 893 aa24■■□□□ 1.43
COL23A1-201ENST00000390654 EPSTI1Q96J88 318 aa24■■□□□ 1.43
COL23A1-201ENST00000390654 EIF4ENIF1Q9NRA8 985 aaKnown RBP24■■□□□ 1.43
COL23A1-201ENST00000390654 FAM53CQ9NYF3 392 aa24■■□□□ 1.43
COL23A1-201ENST00000390654 LMTK3Q96Q04 1460 aa24■■□□□ 1.43
COL23A1-201ENST00000390654 MYO5AQ9Y4I1 1855 aaKnown RBP24■■□□□ 1.43
COL23A1-201ENST00000390654 TFRCP02786 760 aaKnown RBP24■■□□□ 1.43
COL23A1-201ENST00000390654 DZIP3Q86Y13 1208 aaKnown RBP24■■□□□ 1.43
COL23A1-201ENST00000390654 TRIM22Q8IYM9 498 aa24■■□□□ 1.43
COL23A1-201ENST00000390654 VGLL2Q8N8G2 317 aa24■■□□□ 1.43
COL23A1-201ENST00000390654 FBXO2Q9UK22 296 aaPredicted RBP24■■□□□ 1.43
COL23A1-201ENST00000390654 WTIPA6NIX2 430 aaPredicted RBP23.99■■□□□ 1.43
COL23A1-201ENST00000390654 PATL2C9JE40 543 aaKnown RBP23.99■■□□□ 1.43
COL23A1-201ENST00000390654 GYS2P54840 703 aa23.99■■□□□ 1.43
COL23A1-201ENST00000390654 WTAPQ15007 396 aa23.99■■□□□ 1.43
COL23A1-201ENST00000390654 SPECC1LQ69YQ0 1117 aa23.99■■□□□ 1.43
COL23A1-201ENST00000390654 ARGLU1Q9NWB6 273 aaPredicted RBP23.99■■□□□ 1.43
COL23A1-201ENST00000390654 CCP110O43303 1012 aa23.99■■□□□ 1.43
COL23A1-201ENST00000390654 FMNL1O95466 1100 aaPredicted RBP23.99■■□□□ 1.43
COL23A1-201ENST00000390654 BCAMP50895 628 aa23.99■■□□□ 1.43
COL23A1-201ENST00000390654 CCDC12Q8WUD4 166 aaPredicted RBP23.99■■□□□ 1.43
COL23A1-201ENST00000390654 SDR42E1Q8WUS8 393 aa23.99■■□□□ 1.43
COL23A1-201ENST00000390654 VPS54Q9P1Q0 977 aa23.99■■□□□ 1.43
COL23A1-201ENST00000390654 AKNAD1Q5T1N1 836 aa23.99■■□□□ 1.43
COL23A1-201ENST00000390654 MRPL44Q9H9J2 332 aaKnown RBP23.99■■□□□ 1.43
COL23A1-201ENST00000390654 COL5A2P05997 1499 aaPredicted RBP23.99■■□□□ 1.43
COL23A1-201ENST00000390654 GSG1L2A8MUP6 293 aa23.98■■□□□ 1.43
COL23A1-201ENST00000390654 KCNJ6P48051 423 aa23.98■■□□□ 1.43
COL23A1-201ENST00000390654 TICAM2Q86XR7 235 aa23.98■■□□□ 1.43
COL23A1-201ENST00000390654 PODXL2Q9NZ53 605 aa23.98■■□□□ 1.43
COL23A1-201ENST00000390654 KCPQ6ZWJ8 1503 aa23.98■■□□□ 1.43
COL23A1-201ENST00000390654 WDR19Q8NEZ3 1342 aa23.98■■□□□ 1.43
COL23A1-201ENST00000390654 SASH3O75995 380 aa23.98■■□□□ 1.43
COL23A1-201ENST00000390654 NOM1Q5C9Z4 860 aaKnown RBP23.98■■□□□ 1.43
COL23A1-201ENST00000390654 PUF60Q9UHX1 559 aaKnown RBP23.98■■□□□ 1.43
COL23A1-201ENST00000390654 PPP2R3AQ06190 1150 aa23.97■■□□□ 1.43
COL23A1-201ENST00000390654 EARS2Q5JPH6 523 aaKnown RBP23.97■■□□□ 1.43
COL23A1-201ENST00000390654 SGMS1Q86VZ5 419 aa23.97■■□□□ 1.43
COL23A1-201ENST00000390654 TEX13AQ9BXU3 409 aaPredicted RBP23.97■■□□□ 1.43
COL23A1-201ENST00000390654 ABCF2Q9UG63 623 aa23.97■■□□□ 1.43
COL23A1-201ENST00000390654 FBXO3Q9UK99 471 aa23.97■■□□□ 1.43
COL23A1-201ENST00000390654 NKX1-1Q15270 411 aaPredicted RBP23.97■■□□□ 1.43
COL23A1-201ENST00000390654 MPHOSPH8Q99549 860 aa23.97■■□□□ 1.43
COL23A1-201ENST00000390654 A0A087X0B3 334 aa23.97■■□□□ 1.43
COL23A1-201ENST00000390654 PTPREP23469 700 aa23.97■■□□□ 1.43
COL23A1-201ENST00000390654 MAP3K12Q12852 859 aa23.97■■□□□ 1.43
COL23A1-201ENST00000390654 SMIM5Q71RC9 77 aa23.97■■□□□ 1.43
COL23A1-201ENST00000390654 BAZ2BQ9UIF8 2168 aaKnown RBP23.97■■□□□ 1.43
COL23A1-201ENST00000390654 ADAMTSL3P82987 1691 aa23.96■■□□□ 1.43
COL23A1-201ENST00000390654 IFNAR1P17181 557 aa23.96■■□□□ 1.43
COL23A1-201ENST00000390654 TRIM28Q13263 835 aaKnown RBP23.96■■□□□ 1.43
COL23A1-201ENST00000390654 SLC4A8Q2Y0W8 1093 aa23.96■■□□□ 1.43
COL23A1-201ENST00000390654 NEK11Q8NG66 645 aa23.96■■□□□ 1.43
COL23A1-201ENST00000390654 HOOK1Q9UJC3 728 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms