RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 MAP3K10Q02779 954 aa12.03□□□□□ -0.48
IFT88-203ENST00000389373 ATP2B3Q16720 1220 aa12.03□□□□□ -0.48
IFT88-203ENST00000389373 WDR63Q8IWG1 891 aa12.03□□□□□ -0.48
IFT88-203ENST00000389373 ZNF280CQ8ND82 737 aa12.03□□□□□ -0.48
IFT88-203ENST00000389373 MAFAQ8NHW3 353 aaPredicted RBP12.03□□□□□ -0.48
IFT88-203ENST00000389373 CDX2Q99626 313 aaPredicted RBP12.03□□□□□ -0.48
IFT88-203ENST00000389373 DOCK3Q8IZD9 2030 aa12.03□□□□□ -0.48
IFT88-203ENST00000389373 USP17L5A8MUK1 530 aa12.02□□□□□ -0.49
IFT88-203ENST00000389373 COL6A1P12109 1028 aa12.02□□□□□ -0.49
IFT88-203ENST00000389373 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.49
IFT88-203ENST00000389373 PDE3AQ14432 1141 aa12.02□□□□□ -0.49
IFT88-203ENST00000389373 MAP3K21Q5TCX8 1036 aa12.02□□□□□ -0.49
IFT88-203ENST00000389373 SLF2Q8IX21 1173 aa12.02□□□□□ -0.49
IFT88-203ENST00000389373 P2RX7Q99572 595 aaKnown RBP12.02□□□□□ -0.49
IFT88-203ENST00000389373 OSBPL5Q9H0X9 879 aaPredicted RBP12.02□□□□□ -0.49
IFT88-203ENST00000389373 CWC22Q9HCG8 908 aaKnown RBP12.02□□□□□ -0.49
IFT88-203ENST00000389373 CEP126Q9P2H0 1117 aa12.02□□□□□ -0.49
IFT88-203ENST00000389373 PRKAG2Q9UGJ0 569 aa12.02□□□□□ -0.49
IFT88-203ENST00000389373 CACNA1FO60840 1977 aa12.01□□□□□ -0.49
IFT88-203ENST00000389373 CCL14Q16627 93 aa12.01□□□□□ -0.49
IFT88-203ENST00000389373 TRMT44Q8IYL2 757 aaKnown RBP12.01□□□□□ -0.49
IFT88-203ENST00000389373 ZGPATQ8N5A5 531 aaKnown RBP12.01□□□□□ -0.49
IFT88-203ENST00000389373 GPRC5AQ8NFJ5 357 aa12.01□□□□□ -0.49
IFT88-203ENST00000389373 MYLIPQ8WY64 445 aa12.01□□□□□ -0.49
IFT88-203ENST00000389373 SEMA6BQ9H3T3 888 aa12.01□□□□□ -0.49
IFT88-203ENST00000389373 AS3MTQ9HBK9 375 aa12.01□□□□□ -0.49
IFT88-203ENST00000389373 MORF4L1Q9UBU8 362 aa12.01□□□□□ -0.49
IFT88-203ENST00000389373 SALL1Q9NSC2 1324 aa12.01□□□□□ -0.49
IFT88-203ENST00000389373 DOCK2Q92608 1830 aa12□□□□□ -0.49
IFT88-203ENST00000389373 LAMA3Q16787 3333 aa12□□□□□ -0.49
IFT88-203ENST00000389373 TBC1D12O60347 775 aa12□□□□□ -0.49
IFT88-203ENST00000389373 CNGA1P29973 690 aa12□□□□□ -0.49
IFT88-203ENST00000389373 CAP2P40123 477 aa12□□□□□ -0.49
IFT88-203ENST00000389373 RFX5P48382 616 aaPredicted RBP12□□□□□ -0.49
IFT88-203ENST00000389373 LHX8Q68G74 356 aa12□□□□□ -0.49
IFT88-203ENST00000389373 ATG9AQ7Z3C6 839 aa12□□□□□ -0.49
IFT88-203ENST00000389373 SOCS4Q8WXH5 440 aa12□□□□□ -0.49
IFT88-203ENST00000389373 PAGR1Q9BTK6 254 aa12□□□□□ -0.49
IFT88-203ENST00000389373 TXNRD2Q9NNW7 524 aa12□□□□□ -0.49
IFT88-203ENST00000389373 TMOD4Q9NZQ9 345 aa12□□□□□ -0.49
IFT88-203ENST00000389373 GAKO14976 1311 aa12□□□□□ -0.49
IFT88-203ENST00000389373 DOCK1Q14185 1865 aa12□□□□□ -0.49
IFT88-203ENST00000389373 SEMA3EO15041 775 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 XRCC5P13010 732 aaKnown RBP11.99□□□□□ -0.49
IFT88-203ENST00000389373 COL9A1P20849 921 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 ADORA1P30542 326 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 MAPK4P31152 587 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 RGS2P41220 211 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 MTMR2Q13614 643 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 RRP1BQ14684 758 aaKnown RBP11.99□□□□□ -0.49
IFT88-203ENST00000389373 SHHQ15465 462 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 Q3C1V9 767 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 SH3D19Q5HYK7 790 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 SPTY2D1Q68D10 685 aaPredicted RBP11.99□□□□□ -0.49
IFT88-203ENST00000389373 TBC1D2Q9BYX2 928 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 USP44Q9H0E7 712 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 ATP11BQ9Y2G3 1177 aa11.99□□□□□ -0.49
IFT88-203ENST00000389373 MYH13Q9UKX3 1938 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 PHIPQ8WWQ0 1821 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 MROH7-TTC4A0A0A0MT08 1334 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 HERVK_113P62684 666 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
IFT88-203ENST00000389373 WDR78Q5VTH9 848 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 CCDC102BQ68D86 513 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 ERICH6Q7L0X2 663 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 GPR142Q7Z601 462 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 PLEKHH3Q7Z736 793 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 SYMPKQ92797 1274 aaKnown RBP11.98□□□□□ -0.49
IFT88-203ENST00000389373 FAM163AQ96GL9 167 aaPredicted RBP11.98□□□□□ -0.49
IFT88-203ENST00000389373 PORCNQ9H237 461 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 PRDM5Q9NQX1 630 aaPredicted RBP11.98□□□□□ -0.49
IFT88-203ENST00000389373 NDUFB9Q9Y6M9 179 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 PTPRFP10586 1907 aa11.98□□□□□ -0.49
IFT88-203ENST00000389373 RFX7Q2KHR2 1363 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
IFT88-203ENST00000389373 FOSL2P15408 326 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 RHBDL3P58872 404 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 RTP1P59025 263 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 ERVK-9P63128 1117 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 ERVK-24P63145 666 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 MECOMQ03112 1051 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 C9orf50Q5SZB4 431 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 MFSD14CQ5VZR4 134 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 EDC3Q96F86 508 aaKnown RBP11.97□□□□□ -0.49
IFT88-203ENST00000389373 APBA2Q99767 749 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 RBPJLQ9UBG7 517 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 CUL9Q8IWT3 2517 aa11.97□□□□□ -0.49
IFT88-203ENST00000389373 MYH2Q9UKX2 1941 aa11.96□□□□□ -0.49
IFT88-203ENST00000389373 GPR75-ASB3A0A0A6YYF3 556 aa11.96□□□□□ -0.49
IFT88-203ENST00000389373 HOXA7P31268 230 aaPredicted RBP11.96□□□□□ -0.49
IFT88-203ENST00000389373 BACE1P56817 501 aa11.96□□□□□ -0.49
IFT88-203ENST00000389373 TIMM10P62072 90 aa11.96□□□□□ -0.49
IFT88-203ENST00000389373 RASGRF1Q13972 1273 aa11.96□□□□□ -0.49
IFT88-203ENST00000389373 MORN1Q5T089 497 aa11.96□□□□□ -0.49
IFT88-203ENST00000389373 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
IFT88-203ENST00000389373 USP6NLQ92738 828 aa11.96□□□□□ -0.49
IFT88-203ENST00000389373 RAPGEFL1Q9UHV5 662 aa11.96□□□□□ -0.49
IFT88-203ENST00000389373 PA2G4Q9UQ80 394 aaKnown RBP11.96□□□□□ -0.49
IFT88-203ENST00000389373 PLXNB2O15031 1838 aa11.95□□□□□ -0.5
IFT88-203ENST00000389373 CIAO1O76071 339 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms