RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 HOXB4P17483 251 aaPredicted RBP8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 SNRPNP63162 240 aaKnown RBP8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 FXNQ16595 210 aa8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 CDC37L1Q7L3B6 337 aa8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 FAM169BQ8N8A8 192 aa8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 SRPK1Q96SB4 655 aaKnown RBP8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 TMPRSS13Q9BYE2 586 aa8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 PIDD1Q9HB75 910 aa8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 KLHL3Q9UH77 587 aa8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 SLC12A7Q9Y666 1083 aa8.06□□□□□ -1.12
RNU6-40P-201ENST00000384254 MEIS3P2A8K0S8 358 aa8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 FANCGO15287 622 aa8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 WISP1O95388 367 aa8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 SELPP16109 830 aa8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 YARSP54577 528 aaKnown RBP8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 SERINC3Q13530 473 aa8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 PPM1JQ5JR12 505 aa8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 GIMAP6Q6P9H5 292 aa8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 LINC00114Q6XXX2 140 aa8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 C19orf47Q8N9M1 422 aaKnown RBP8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 KCT2Q8NC54 265 aa8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 WNT10AQ9GZT5 417 aa8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 CDK11AQ9UQ88 783 aaPredicted RBP8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 PCDHGC5Q9Y5F6 944 aa8.05□□□□□ -1.12
RNU6-40P-201ENST00000384254 CCDC85CA6NKD9 419 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 FAM229AH3BQW9 127 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 TMPRSS2O15393 492 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 ADH5P11766 374 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 GUCY2CP25092 1073 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 TMEM201Q5SNT2 666 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 ZBTB37Q5TC79 503 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 ANKRD34AQ69YU3 496 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 OVOS1Q6IE37 1185 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 KIAA1211Q6ZU35 1233 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 NLRC3Q7RTR2 1065 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 DYMQ7RTS9 669 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 FAM177A1Q8N128 213 aaPredicted RBP8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 C12orf50Q8NA57 414 aaPredicted RBP8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 ZSCAN1Q8NBB4 408 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 SMG8Q8ND04 991 aaKnown RBP8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 ZNF507Q8TCN5 953 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 PIF1Q9H611 641 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 SUGCTQ9HAC7 445 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 SSU72Q9NP77 194 aaKnown RBP8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 CRIM1Q9NZV1 1036 aa8.04□□□□□ -1.12
RNU6-40P-201ENST00000384254 ARHGEF15O94989 841 aa8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 RAG1P15918 1043 aa8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 CASP7P55210 303 aa8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 DDR2Q16832 855 aa8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 HID1Q8IV36 788 aa8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 TAB3Q8N5C8 712 aaPredicted RBP8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 BEND7Q8N7W2 519 aaPredicted RBP8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 RNF214Q8ND24 703 aa8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 FAM13CQ8NE31 585 aa8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 FANCD2OSQ96PS1 177 aa8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 ANTXR1Q9H6X2 564 aa8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 USP21Q9UK80 565 aa8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 PPP1R9AQ9ULJ8 1098 aa8.03□□□□□ -1.12
RNU6-40P-201ENST00000384254 SLC22A31A6NKX4 558 aa8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 SART1O43290 800 aaKnown RBP8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 RNGTTO60942 597 aaKnown RBP8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 CHMP4BP1P59074 171 aa8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 SOX4Q06945 474 aaPredicted RBP8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 IFRD2Q12894 506 aaPredicted RBP8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 RUFY4Q6ZNE9 571 aa8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 LRP10Q7Z4F1 713 aa8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 TTC6Q86TZ1 520 aa8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 DEPDC7Q96QD5 511 aa8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 NACC1Q96RE7 527 aa8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 CEP41Q9BYV8 373 aa8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 ST7Q9NRC1 585 aa8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 MAPK8IP1Q9UQF2 711 aa8.02□□□□□ -1.13
RNU6-40P-201ENST00000384254 TLDC2A0PJX2 215 aa8.01□□□□□ -1.13
RNU6-40P-201ENST00000384254 GAS2O43903 313 aaKnown RBP8.01□□□□□ -1.13
RNU6-40P-201ENST00000384254 DDAH1O94760 285 aa8.01□□□□□ -1.13
RNU6-40P-201ENST00000384254 APBA3O96018 575 aa8.01□□□□□ -1.13
RNU6-40P-201ENST00000384254 SPATA31C1P0DKV0 1188 aa8.01□□□□□ -1.13
RNU6-40P-201ENST00000384254 NME1P15531 152 aaKnown RBP8.01□□□□□ -1.13
RNU6-40P-201ENST00000384254 RING1Q06587 406 aa8.01□□□□□ -1.13
RNU6-40P-201ENST00000384254 ARSHQ5FYA8 562 aa8.01□□□□□ -1.13
RNU6-40P-201ENST00000384254 PHACTR4Q8IZ21 702 aa8.01□□□□□ -1.13
RNU6-40P-201ENST00000384254 ATG4CQ96DT6 458 aa8.01□□□□□ -1.13
RNU6-40P-201ENST00000384254 SNTG2Q9NY99 539 aa8.01□□□□□ -1.13
RNU6-40P-201ENST00000384254 A0A1W2PQH9 124 aa8□□□□□ -1.13
RNU6-40P-201ENST00000384254 HCLS1P14317 486 aaPredicted RBP8□□□□□ -1.13
RNU6-40P-201ENST00000384254 ASPAP45381 313 aa8□□□□□ -1.13
RNU6-40P-201ENST00000384254 TTLL4Q14679 1199 aa8□□□□□ -1.13
RNU6-40P-201ENST00000384254 CDCP2Q5VXM1 449 aa8□□□□□ -1.13
RNU6-40P-201ENST00000384254 INTS3Q68E01 1043 aaKnown RBP8□□□□□ -1.13
RNU6-40P-201ENST00000384254 SLC6A19Q695T7 634 aa8□□□□□ -1.13
RNU6-40P-201ENST00000384254 ZNF746Q6NUN9 644 aaPredicted RBP8□□□□□ -1.13
RNU6-40P-201ENST00000384254 MCATQ8IVS2 390 aaKnown RBP8□□□□□ -1.13
RNU6-40P-201ENST00000384254 TMEM130Q8N3G9 435 aa8□□□□□ -1.13
RNU6-40P-201ENST00000384254 ACSF2Q96CM8 615 aaPredicted RBP8□□□□□ -1.13
RNU6-40P-201ENST00000384254 TMEM87BQ96K49 555 aa8□□□□□ -1.13
RNU6-40P-201ENST00000384254 YIPF2Q9BWQ6 316 aa8□□□□□ -1.13
RNU6-40P-201ENST00000384254 TNKS2Q9H2K2 1166 aa8□□□□□ -1.13
RNU6-40P-201ENST00000384254 CNNM2Q9H8M5 875 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms