RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 GOLGA8BA8MQT2 603 aa23.07■■□□□ 1.28
CCM2-202ENST00000381112 RANBP6O60518 1105 aaKnown RBP23.07■■□□□ 1.28
CCM2-202ENST00000381112 DTNBO60941 627 aa23.07■■□□□ 1.28
CCM2-202ENST00000381112 NT5C2P49902 561 aa23.07■■□□□ 1.28
CCM2-202ENST00000381112 CCT2P78371 535 aaKnown RBP23.07■■□□□ 1.28
CCM2-202ENST00000381112 JDP2Q8WYK2 163 aa23.07■■□□□ 1.28
CCM2-202ENST00000381112 DYNLL2Q96FJ2 89 aa23.07■■□□□ 1.28
CCM2-202ENST00000381112 ZKSCAN3Q9BRR0 538 aa23.07■■□□□ 1.28
CCM2-202ENST00000381112 DDX60LQ5H9U9 1706 aaKnown RBP23.06■■□□□ 1.28
CCM2-202ENST00000381112 ADAMTSL1Q8N6G6 1762 aa23.06■■□□□ 1.28
CCM2-202ENST00000381112 NAV1Q8NEY1 1877 aa23.06■■□□□ 1.28
CCM2-202ENST00000381112 PSME4Q14997 1843 aa23.06■■□□□ 1.28
CCM2-202ENST00000381112 RBM5P52756 815 aaKnown RBP eCLIP23.06■■□□□ 1.28
CCM2-202ENST00000381112 CXCL9Q07325 125 aa23.06■■□□□ 1.28
CCM2-202ENST00000381112 PICALMQ13492 652 aa23.06■■□□□ 1.28
CCM2-202ENST00000381112 UBAC1Q9BSL1 405 aa23.06■■□□□ 1.28
CCM2-202ENST00000381112 NCOA5Q9HCD5 579 aaKnown RBP23.06■■□□□ 1.28
CCM2-202ENST00000381112 BRD1O95696 1058 aa23.05■■□□□ 1.28
CCM2-202ENST00000381112 APOA5Q6Q788 366 aa23.05■■□□□ 1.28
CCM2-202ENST00000381112 CHMP4CQ96CF2 233 aa23.05■■□□□ 1.28
CCM2-202ENST00000381112 FHDC1Q9C0D6 1143 aaPredicted RBP23.05■■□□□ 1.28
CCM2-202ENST00000381112 CTDNEP1O95476 244 aa23.05■■□□□ 1.28
CCM2-202ENST00000381112 WTAPQ15007 396 aa23.05■■□□□ 1.28
CCM2-202ENST00000381112 SEC23AQ15436 765 aa23.05■■□□□ 1.28
CCM2-202ENST00000381112 CFAP100Q494V2 611 aa23.05■■□□□ 1.28
CCM2-202ENST00000381112 SMARCC2Q8TAQ2 1214 aa23.05■■□□□ 1.28
CCM2-202ENST00000381112 ZSCAN10Q96SZ4 725 aaPredicted RBP23.05■■□□□ 1.28
CCM2-202ENST00000381112 CDK5RAP2Q96SN8 1893 aa23.04■■□□□ 1.28
CCM2-202ENST00000381112 TNKSO95271 1327 aa23.04■■□□□ 1.28
CCM2-202ENST00000381112 ERICH2A1L162 156 aa23.04■■□□□ 1.28
CCM2-202ENST00000381112 JAK2O60674 1132 aa23.04■■□□□ 1.28
CCM2-202ENST00000381112 RASSF7Q02833 373 aa23.04■■□□□ 1.28
CCM2-202ENST00000381112 NFXL1Q6ZNB6 911 aa23.04■■□□□ 1.28
CCM2-202ENST00000381112 TMTC2Q8N394 836 aa23.04■■□□□ 1.28
CCM2-202ENST00000381112 NSUN7Q8NE18 718 aaKnown RBP23.04■■□□□ 1.28
CCM2-202ENST00000381112 AGBL3Q8NEM8 1001 aa23.04■■□□□ 1.28
CCM2-202ENST00000381112 ZBTB12Q9Y330 459 aaPredicted RBP23.04■■□□□ 1.28
CCM2-202ENST00000381112 SYT1P21579 422 aa23.03■■□□□ 1.28
CCM2-202ENST00000381112 PRELPP51888 382 aa23.03■■□□□ 1.28
CCM2-202ENST00000381112 NFIAQ12857 509 aa23.03■■□□□ 1.28
CCM2-202ENST00000381112 C16orf86Q6ZW13 317 aa23.03■■□□□ 1.28
CCM2-202ENST00000381112 IQCA1Q86XH1 822 aa23.03■■□□□ 1.28
CCM2-202ENST00000381112 OSBPL5Q9H0X9 879 aaPredicted RBP23.03■■□□□ 1.28
CCM2-202ENST00000381112 CIAPIN1Q6FI81 312 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 ENAHQ8N8S7 591 aaPredicted RBP23.02■■□□□ 1.28
CCM2-202ENST00000381112 SLC44A5Q8NCS7 719 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 IDI2Q9BXS1 227 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 CCDC69A6NI79 296 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 FAM47AQ5JRC9 791 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 CLEC17AQ6ZS10 378 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 TTC6Q86TZ1 520 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 RAB11FIP4Q86YS3 637 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 PRMT6Q96LA8 375 aaPredicted RBP23.02■■□□□ 1.28
CCM2-202ENST00000381112 MKNK2Q9HBH9 465 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 ZNF287Q9HBT7 754 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 HDAC9Q9UKV0 1011 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 SLC12A7Q9Y666 1083 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 FOCADQ5VW36 1801 aa23.02■■□□□ 1.28
CCM2-202ENST00000381112 WDR33Q9C0J8 1336 aaKnown RBP23.01■■□□□ 1.27
CCM2-202ENST00000381112 ZBTB43O43298 467 aa23.01■■□□□ 1.27
CCM2-202ENST00000381112 DHX16O60231 1041 aaKnown RBP23.01■■□□□ 1.27
CCM2-202ENST00000381112 NPM3O75607 178 aaKnown RBP23.01■■□□□ 1.27
CCM2-202ENST00000381112 TSPY2A6NKD2 308 aa23■■□□□ 1.27
CCM2-202ENST00000381112 STX6O43752 255 aa23■■□□□ 1.27
CCM2-202ENST00000381112 CDK8P49336 464 aa23■■□□□ 1.27
CCM2-202ENST00000381112 METAP2P50579 478 aaKnown RBP eCLIP23■■□□□ 1.27
CCM2-202ENST00000381112 NBR1Q14596 966 aa23■■□□□ 1.27
CCM2-202ENST00000381112 OGFOD1Q8N543 542 aa23■■□□□ 1.27
CCM2-202ENST00000381112 ARFGEF1Q9Y6D6 1849 aa23■■□□□ 1.27
CCM2-202ENST00000381112 PTPDC1A2A3K4 754 aa23■■□□□ 1.27
CCM2-202ENST00000381112 RASA1P20936 1047 aa23■■□□□ 1.27
CCM2-202ENST00000381112 CACNB3P54284 484 aa23■■□□□ 1.27
CCM2-202ENST00000381112 TFAP4Q01664 338 aa23■■□□□ 1.27
CCM2-202ENST00000381112 GABPAQ06546 454 aa23■■□□□ 1.27
CCM2-202ENST00000381112 TNIP1Q15025 636 aa23■■□□□ 1.27
CCM2-202ENST00000381112 MICU3Q86XE3 530 aa23■■□□□ 1.27
CCM2-202ENST00000381112 TDRD3Q9H7E2 651 aaKnown RBP23■■□□□ 1.27
CCM2-202ENST00000381112 FAM198AQ9UFP1 575 aa23■■□□□ 1.27
CCM2-202ENST00000381112 NID2Q14112 1375 aa23■■□□□ 1.27
CCM2-202ENST00000381112 SPDYE2BA6NHP3 402 aa22.99■■□□□ 1.27
CCM2-202ENST00000381112 SPDYE6P0CI01 402 aa22.99■■□□□ 1.27
CCM2-202ENST00000381112 PDCP20941 246 aa22.99■■□□□ 1.27
CCM2-202ENST00000381112 RCAN1P53805 252 aa22.99■■□□□ 1.27
CCM2-202ENST00000381112 HMGN5P82970 282 aaKnown RBP22.99■■□□□ 1.27
CCM2-202ENST00000381112 ZFPM1Q8IX07 1006 aa22.99■■□□□ 1.27
CCM2-202ENST00000381112 PDIA4P13667 645 aaKnown RBP22.98■■□□□ 1.27
CCM2-202ENST00000381112 LARP1BQ659C4 914 aaKnown RBP22.98■■□□□ 1.27
CCM2-202ENST00000381112 SYNE3Q6ZMZ3 975 aa22.98■■□□□ 1.27
CCM2-202ENST00000381112 ZNF444Q8N0Y2 327 aaPredicted RBP22.98■■□□□ 1.27
CCM2-202ENST00000381112 DDX11Q96FC9 970 aa22.98■■□□□ 1.27
CCM2-202ENST00000381112 MYL10Q9BUA6 226 aa22.98■■□□□ 1.27
CCM2-202ENST00000381112 FZD9O00144 591 aa22.98■■□□□ 1.27
CCM2-202ENST00000381112 NMT2O60551 498 aa22.98■■□□□ 1.27
CCM2-202ENST00000381112 RXRAP19793 462 aa22.98■■□□□ 1.27
CCM2-202ENST00000381112 MCM4P33991 863 aa22.98■■□□□ 1.27
CCM2-202ENST00000381112 IFIT1BQ5T764 474 aaKnown RBP22.98■■□□□ 1.27
CCM2-202ENST00000381112 FOXD4L5Q5VV16 416 aaPredicted RBP22.98■■□□□ 1.27
CCM2-202ENST00000381112 MTMR14Q8NCE2 650 aa22.98■■□□□ 1.27
CCM2-202ENST00000381112 FOXD4L4Q8WXT5 416 aaPredicted RBP22.98■■□□□ 1.27
CCM2-202ENST00000381112 GBP4Q96PP9 640 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms