RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 GSPT1P15170 499 aaKnown RBP17.84■□□□□ 0.45
VCX3B-201ENST00000381029 USP5P45974 858 aa17.84■□□□□ 0.45
VCX3B-201ENST00000381029 PLCD1P51178 756 aa17.84■□□□□ 0.45
VCX3B-201ENST00000381029 GABPAQ06546 454 aa17.84■□□□□ 0.45
VCX3B-201ENST00000381029 COL13A1Q5TAT6 717 aaPredicted RBP17.84■□□□□ 0.45
VCX3B-201ENST00000381029 CENPQQ7L2Z9 268 aaPredicted RBP17.84■□□□□ 0.45
VCX3B-201ENST00000381029 MS4A4AQ96JQ5 239 aa17.84■□□□□ 0.45
VCX3B-201ENST00000381029 EHD4Q9H223 541 aa17.84■□□□□ 0.45
VCX3B-201ENST00000381029 SAP30BPQ9UHR5 308 aaKnown RBP17.84■□□□□ 0.45
VCX3B-201ENST00000381029 HERC5Q9UII4 1024 aaKnown RBP17.84■□□□□ 0.45
VCX3B-201ENST00000381029 AK9Q5TCS8 1911 aa17.83■□□□□ 0.44
VCX3B-201ENST00000381029 GSG1L2A8MUP6 293 aa17.83■□□□□ 0.44
VCX3B-201ENST00000381029 SMIM22K7EJ46 135 aa17.83■□□□□ 0.44
VCX3B-201ENST00000381029 TM4SF4P48230 202 aa17.83■□□□□ 0.44
VCX3B-201ENST00000381029 JAG1P78504 1218 aa17.83■□□□□ 0.44
VCX3B-201ENST00000381029 FOXP4Q8IVH2 680 aaPredicted RBP17.83■□□□□ 0.44
VCX3B-201ENST00000381029 OPTNQ96CV9 577 aa17.83■□□□□ 0.44
VCX3B-201ENST00000381029 ATP8A2Q9NTI2 1148 aa17.83■□□□□ 0.44
VCX3B-201ENST00000381029 MYH1P12882 1939 aa17.82■□□□□ 0.44
VCX3B-201ENST00000381029 NAV1Q8NEY1 1877 aa17.82■□□□□ 0.44
VCX3B-201ENST00000381029 TESPA1A2RU30 521 aaPredicted RBP17.82■□□□□ 0.44
VCX3B-201ENST00000381029 GPAA1O43292 621 aa17.82■□□□□ 0.44
VCX3B-201ENST00000381029 CTNND1O60716 968 aaKnown RBP17.82■□□□□ 0.44
VCX3B-201ENST00000381029 HSPA1AP0DMV8 641 aaKnown RBP17.82■□□□□ 0.44
VCX3B-201ENST00000381029 HSPA1BP0DMV9 641 aaKnown RBP17.82■□□□□ 0.44
VCX3B-201ENST00000381029 MAP2K1Q02750 393 aaPredicted RBP17.82■□□□□ 0.44
VCX3B-201ENST00000381029 ERO1BQ86YB8 467 aa17.82■□□□□ 0.44
VCX3B-201ENST00000381029 SCYL3Q8IZE3 742 aa17.82■□□□□ 0.44
VCX3B-201ENST00000381029 AIDAQ96BJ3 306 aa17.82■□□□□ 0.44
VCX3B-201ENST00000381029 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.82■□□□□ 0.44
VCX3B-201ENST00000381029 EPB41L4AQ9HCS5 686 aaPredicted RBP17.82■□□□□ 0.44
VCX3B-201ENST00000381029 CSADQ9Y600 493 aa17.82■□□□□ 0.44
VCX3B-201ENST00000381029 MKRN3Q13064 507 aaKnown RBP17.81■□□□□ 0.44
VCX3B-201ENST00000381029 TTC22Q5TAA0 569 aa17.81■□□□□ 0.44
VCX3B-201ENST00000381029 TATDN1Q6P1N9 297 aa17.81■□□□□ 0.44
VCX3B-201ENST00000381029 SLC4A4Q9Y6R1 1079 aa17.81■□□□□ 0.44
VCX3B-201ENST00000381029 A0A0D9SFI3 127 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 IRF6O14896 467 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 FOXN1O15353 648 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 CYP2D6P10635 497 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 PTPRAP18433 802 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 CAP2P40123 477 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 PPIL2Q13356 520 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 SLC4A8Q2Y0W8 1093 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 LRRFIP1Q32MZ4 808 aaKnown RBP17.8■□□□□ 0.44
VCX3B-201ENST00000381029 C12orf60Q5U649 245 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 GIMAP6Q6P9H5 292 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 SKAP1Q86WV1 359 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 REM2Q8IYK8 340 aaPredicted RBP17.8■□□□□ 0.44
VCX3B-201ENST00000381029 FAM227BQ96M60 508 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 MCM9Q9NXL9 1143 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 KCNH4Q9UQ05 1017 aa17.8■□□□□ 0.44
VCX3B-201ENST00000381029 SHMT1P34896 483 aa17.79■□□□□ 0.44
VCX3B-201ENST00000381029 PPATQ06203 517 aa17.79■□□□□ 0.44
VCX3B-201ENST00000381029 MOGSQ13724 837 aa17.79■□□□□ 0.44
VCX3B-201ENST00000381029 SHROOM1Q2M3G4 852 aaPredicted RBP17.79■□□□□ 0.44
VCX3B-201ENST00000381029 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
VCX3B-201ENST00000381029 CTR9Q6PD62 1173 aa17.79■□□□□ 0.44
VCX3B-201ENST00000381029 TTC6Q86TZ1 520 aa17.79■□□□□ 0.44
VCX3B-201ENST00000381029 OTUD5Q96G74 571 aa17.79■□□□□ 0.44
VCX3B-201ENST00000381029 PTPN18Q99952 460 aa17.79■□□□□ 0.44
VCX3B-201ENST00000381029 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.79■□□□□ 0.44
VCX3B-201ENST00000381029 SERPINB13Q9UIV8 391 aa17.79■□□□□ 0.44
VCX3B-201ENST00000381029 DOCK1Q14185 1865 aa17.78■□□□□ 0.44
VCX3B-201ENST00000381029 PHIPQ8WWQ0 1821 aa17.78■□□□□ 0.44
VCX3B-201ENST00000381029 CYP2D7A0A087X1C5 515 aa17.78■□□□□ 0.44
VCX3B-201ENST00000381029 MANSC4A6NHS7 340 aaPredicted RBP17.78■□□□□ 0.44
VCX3B-201ENST00000381029 USP17L12C9JPN9 530 aa17.78■□□□□ 0.44
VCX3B-201ENST00000381029 USP17L21D6R901 530 aa17.78■□□□□ 0.44
VCX3B-201ENST00000381029 HLA-DOAP06340 250 aa17.78■□□□□ 0.44
VCX3B-201ENST00000381029 SDSP20132 328 aa17.78■□□□□ 0.44
VCX3B-201ENST00000381029 NMIQ13287 307 aaPredicted RBP17.78■□□□□ 0.44
VCX3B-201ENST00000381029 SBK1Q52WX2 424 aa17.78■□□□□ 0.44
VCX3B-201ENST00000381029 CCDC129Q6ZRS4 1044 aa17.78■□□□□ 0.44
VCX3B-201ENST00000381029 BRI3BPQ8WY22 251 aa17.78■□□□□ 0.44
VCX3B-201ENST00000381029 HELLSQ9NRZ9 838 aa17.78■□□□□ 0.44
VCX3B-201ENST00000381029 BAZ2AQ9UIF9 1905 aaKnown RBP17.78■□□□□ 0.44
VCX3B-201ENST00000381029 TRIM6-TRIM34B2RNG4 842 aa17.77■□□□□ 0.44
VCX3B-201ENST00000381029 PATL2C9JE40 543 aaKnown RBP17.77■□□□□ 0.44
VCX3B-201ENST00000381029 IGF2BP3O00425 579 aaKnown RBP eCLIP17.77■□□□□ 0.44
VCX3B-201ENST00000381029 NEFLP07196 543 aa17.77■□□□□ 0.44
VCX3B-201ENST00000381029 ZNF589Q86UQ0 364 aaPredicted RBP17.77■□□□□ 0.44
VCX3B-201ENST00000381029 CCDC84Q86UT8 332 aaPredicted RBP17.77■□□□□ 0.44
VCX3B-201ENST00000381029 RILPL2Q969X0 211 aa17.77■□□□□ 0.44
VCX3B-201ENST00000381029 RNF186Q9NXI6 227 aa17.77■□□□□ 0.44
VCX3B-201ENST00000381029 TAOK2Q9UL54 1235 aa17.77■□□□□ 0.44
VCX3B-201ENST00000381029 AFG3L2Q9Y4W6 797 aa17.77■□□□□ 0.44
VCX3B-201ENST00000381029 POLR3DP05423 398 aaPredicted RBP17.76■□□□□ 0.43
VCX3B-201ENST00000381029 HSPA8P11142 646 aaKnown RBP17.76■□□□□ 0.43
VCX3B-201ENST00000381029 GNAT2P19087 354 aa17.76■□□□□ 0.43
VCX3B-201ENST00000381029 INHBEP58166 350 aa17.76■□□□□ 0.43
VCX3B-201ENST00000381029 VPS53Q5VIR6 699 aa17.76■□□□□ 0.43
VCX3B-201ENST00000381029 IFNL1Q8IU54 200 aa17.76■□□□□ 0.43
VCX3B-201ENST00000381029 CCDC136Q96JN2 1154 aa17.76■□□□□ 0.43
VCX3B-201ENST00000381029 CFHR5Q9BXR6 569 aa17.76■□□□□ 0.43
VCX3B-201ENST00000381029 IL25Q9H293 177 aa17.76■□□□□ 0.43
VCX3B-201ENST00000381029 SAGE1Q9NXZ1 904 aa17.76■□□□□ 0.43
VCX3B-201ENST00000381029 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.76■□□□□ 0.43
VCX3B-201ENST00000381029 ROBO3Q96MS0 1386 aa17.76■□□□□ 0.43
VCX3B-201ENST00000381029 GTF2A2P52657 109 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms