RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ASCC2Q9H1I8 757 aaPredicted RBP21.64■■□□□ 1.05
HMGN1-203ENST00000380748 DENND2AQ9ULE3 1009 aa21.64■■□□□ 1.05
HMGN1-203ENST00000380748 PRKAR2AP13861 404 aaKnown RBP21.63■■□□□ 1.05
HMGN1-203ENST00000380748 CYP2B6P20813 491 aa21.63■■□□□ 1.05
HMGN1-203ENST00000380748 HMGCS2P54868 508 aa21.63■■□□□ 1.05
HMGN1-203ENST00000380748 MDM2Q00987 491 aaPredicted RBP21.63■■□□□ 1.05
HMGN1-203ENST00000380748 COL6A1P12109 1028 aa21.62■■□□□ 1.05
HMGN1-203ENST00000380748 BTDP43251 543 aa21.62■■□□□ 1.05
HMGN1-203ENST00000380748 LRRC26Q2I0M4 334 aa21.62■■□□□ 1.05
HMGN1-203ENST00000380748 DZIP1Q86YF9 867 aaKnown RBP21.62■■□□□ 1.05
HMGN1-203ENST00000380748 FAM161BQ96MY7 647 aa21.62■■□□□ 1.05
HMGN1-203ENST00000380748 SIL1Q9H173 461 aa21.62■■□□□ 1.05
HMGN1-203ENST00000380748 PRUNE2Q8WUY3 3088 aa21.62■■□□□ 1.05
HMGN1-203ENST00000380748 COL2A1P02458 1487 aaPredicted RBP21.61■■□□□ 1.05
HMGN1-203ENST00000380748 POTEB2H3BUK9 544 aa21.61■■□□□ 1.05
HMGN1-203ENST00000380748 SEMA3EO15041 775 aa21.61■■□□□ 1.05
HMGN1-203ENST00000380748 ZNF280CQ8ND82 737 aa21.61■■□□□ 1.05
HMGN1-203ENST00000380748 ATAD5Q96QE3 1844 aa21.61■■□□□ 1.05
HMGN1-203ENST00000380748 TBC1D12O60347 775 aa21.6■■□□□ 1.05
HMGN1-203ENST00000380748 PEX10O60683 326 aa21.6■■□□□ 1.05
HMGN1-203ENST00000380748 ADORA1P30542 326 aa21.6■■□□□ 1.05
HMGN1-203ENST00000380748 PABPC4Q13310 644 aaKnown RBP eCLIP21.6■■□□□ 1.058e-10■■□□□ 13.3
HMGN1-203ENST00000380748 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.6■■□□□ 1.05
HMGN1-203ENST00000380748 CEP126Q9P2H0 1117 aa21.6■■□□□ 1.05
HMGN1-203ENST00000380748 MORF4L1Q9UBU8 362 aa21.6■■□□□ 1.05
HMGN1-203ENST00000380748 RASGRF1Q13972 1273 aa21.59■■□□□ 1.05
HMGN1-203ENST00000380748 RRP1BQ14684 758 aaKnown RBP21.59■■□□□ 1.05
HMGN1-203ENST00000380748 FAM109BQ6ICB4 259 aaPredicted RBP21.59■■□□□ 1.05
HMGN1-203ENST00000380748 ZGPATQ8N5A5 531 aaKnown RBP21.59■■□□□ 1.05
HMGN1-203ENST00000380748 MRPL50Q8N5N7 158 aaKnown RBP21.59■■□□□ 1.05
HMGN1-203ENST00000380748 FAM163AQ96GL9 167 aaPredicted RBP21.59■■□□□ 1.05
HMGN1-203ENST00000380748 OSBPL5Q9H0X9 879 aaPredicted RBP21.59■■□□□ 1.05
HMGN1-203ENST00000380748 ABCF2Q9UG63 623 aa21.59■■□□□ 1.05
HMGN1-203ENST00000380748 MROH7-TTC4A0A0A0MT08 1334 aa21.58■■□□□ 1.05
HMGN1-203ENST00000380748 RHBDL3P58872 404 aa21.58■■□□□ 1.05
HMGN1-203ENST00000380748 CACNB2Q08289 660 aaPredicted RBP21.58■■□□□ 1.05
HMGN1-203ENST00000380748 CCDC102BQ68D86 513 aa21.58■■□□□ 1.05
HMGN1-203ENST00000380748 CIAO1O76071 339 aa21.57■■□□□ 1.04
HMGN1-203ENST00000380748 SH3D19Q5HYK7 790 aa21.57■■□□□ 1.04
HMGN1-203ENST00000380748 LHX8Q68G74 356 aa21.57■■□□□ 1.04
HMGN1-203ENST00000380748 SLF2Q8IX21 1173 aa21.57■■□□□ 1.04
HMGN1-203ENST00000380748 NUDT12Q9BQG2 462 aa21.57■■□□□ 1.04
HMGN1-203ENST00000380748 TXNRD2Q9NNW7 524 aa21.57■■□□□ 1.04
HMGN1-203ENST00000380748 XRCC5P13010 732 aaKnown RBP21.56■■□□□ 1.04
HMGN1-203ENST00000380748 ZKSCAN1P17029 563 aaPredicted RBP21.56■■□□□ 1.04
HMGN1-203ENST00000380748 CCND3P30281 292 aaPredicted RBP21.56■■□□□ 1.04
HMGN1-203ENST00000380748 SOCS4Q8WXH5 440 aa21.56■■□□□ 1.04
HMGN1-203ENST00000380748 TBC1D2Q9BYX2 928 aa21.56■■□□□ 1.04
HMGN1-203ENST00000380748 MRS2Q9HD23 443 aa21.56■■□□□ 1.04
HMGN1-203ENST00000380748 PTPRCP08575 1304 aa21.55■■□□□ 1.04
HMGN1-203ENST00000380748 GPR75-ASB3A0A0A6YYF3 556 aa21.55■■□□□ 1.04
HMGN1-203ENST00000380748 USP17L5A8MUK1 530 aa21.55■■□□□ 1.04
HMGN1-203ENST00000380748 CAP2P40123 477 aa21.55■■□□□ 1.04
HMGN1-203ENST00000380748 IRX3P78415 501 aaPredicted RBP21.55■■□□□ 1.04
HMGN1-203ENST00000380748 MECOMQ03112 1051 aa21.55■■□□□ 1.04
HMGN1-203ENST00000380748 CCL14Q16627 93 aa21.55■■□□□ 1.04
HMGN1-203ENST00000380748 ZNF384Q8TF68 577 aa21.55■■□□□ 1.04
HMGN1-203ENST00000380748 FBXO3Q9UK99 471 aa21.55■■□□□ 1.04
HMGN1-203ENST00000380748 MAST2Q6P0Q8 1798 aa21.54■■□□□ 1.04
HMGN1-203ENST00000380748 ZBTB22O15209 634 aa21.54■■□□□ 1.04
HMGN1-203ENST00000380748 MTMR2Q13614 643 aa21.54■■□□□ 1.04
HMGN1-203ENST00000380748 P2RX7Q99572 595 aaKnown RBP21.54■■□□□ 1.04
HMGN1-203ENST00000380748 FRMPD3Q5JV73 1810 aa21.54■■□□□ 1.04
HMGN1-203ENST00000380748 TTC28Q96AY4 2481 aa21.54■■□□□ 1.04
HMGN1-203ENST00000380748 PDS5AQ29RF7 1337 aaKnown RBP21.54■■□□□ 1.04
HMGN1-203ENST00000380748 NPM3O75607 178 aaKnown RBP21.53■■□□□ 1.04
HMGN1-203ENST00000380748 SPTY2D1Q68D10 685 aaPredicted RBP21.53■■□□□ 1.04
HMGN1-203ENST00000380748 GPRC5AQ8NFJ5 357 aa21.53■■□□□ 1.04
HMGN1-203ENST00000380748 USP6NLQ92738 828 aa21.53■■□□□ 1.04
HMGN1-203ENST00000380748 PA2G4Q9UQ80 394 aaKnown RBP21.53■■□□□ 1.04
HMGN1-203ENST00000380748 CDH23Q9H251 3354 aa21.53■■□□□ 1.04
HMGN1-203ENST00000380748 HERVK_113P62684 666 aa21.52■■□□□ 1.04
HMGN1-203ENST00000380748 PDE3AQ14432 1141 aa21.52■■□□□ 1.04
HMGN1-203ENST00000380748 ZNF697Q5TEC3 545 aa21.52■■□□□ 1.04
HMGN1-203ENST00000380748 TRMT44Q8IYL2 757 aaKnown RBP21.52■■□□□ 1.04
HMGN1-203ENST00000380748 LBHD1Q9BQE6 289 aaPredicted RBP21.52■■□□□ 1.04
HMGN1-203ENST00000380748 AS3MTQ9HBK9 375 aa21.52■■□□□ 1.04
HMGN1-203ENST00000380748 IL15P40933 162 aaPredicted RBP21.51■■□□□ 1.03
HMGN1-203ENST00000380748 TIMM10P62072 90 aa21.51■■□□□ 1.03
HMGN1-203ENST00000380748 ERICH6Q7L0X2 663 aa21.51■■□□□ 1.03
HMGN1-203ENST00000380748 PORCNQ9H237 461 aa21.51■■□□□ 1.03
HMGN1-203ENST00000380748 RBPJLQ9UBG7 517 aa21.51■■□□□ 1.03
HMGN1-203ENST00000380748 MAPK4P31152 587 aa21.5■■□□□ 1.03
HMGN1-203ENST00000380748 HOXA7P31268 230 aaPredicted RBP21.5■■□□□ 1.03
HMGN1-203ENST00000380748 RGS2P41220 211 aa21.5■■□□□ 1.03
HMGN1-203ENST00000380748 Q3C1V9 767 aa21.5■■□□□ 1.03
HMGN1-203ENST00000380748 MORN1Q5T089 497 aa21.5■■□□□ 1.03
HMGN1-203ENST00000380748 GPR142Q7Z601 462 aa21.5■■□□□ 1.03
HMGN1-203ENST00000380748 CDX2Q99626 313 aaPredicted RBP21.5■■□□□ 1.03
HMGN1-203ENST00000380748 WDR18Q9BV38 432 aa21.5■■□□□ 1.03
HMGN1-203ENST00000380748 SENP6Q9GZR1 1112 aaPredicted RBP21.5■■□□□ 1.03
HMGN1-203ENST00000380748 PRDM6Q9NQX0 595 aa21.5■■□□□ 1.03
HMGN1-203ENST00000380748 TMOD4Q9NZQ9 345 aa21.5■■□□□ 1.03
HMGN1-203ENST00000380748 SIPA1L1O43166 1804 aa21.5■■□□□ 1.03
HMGN1-203ENST00000380748 BACE1P56817 501 aa21.49■■□□□ 1.03
HMGN1-203ENST00000380748 JAG1P78504 1218 aa21.49■■□□□ 1.03
HMGN1-203ENST00000380748 MAFAQ8NHW3 353 aaPredicted RBP21.49■■□□□ 1.03
HMGN1-203ENST00000380748 SSH1Q8WYL5 1049 aa21.49■■□□□ 1.03
HMGN1-203ENST00000380748 APBA2Q99767 749 aa21.49■■□□□ 1.03
HMGN1-203ENST00000380748 LTBP2Q14767 1821 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms