RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 RNF123Q5XPI4 1314 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 GOLGA6CA6NDK9 693 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 GOLGA6BA6NDN3 693 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 A6NNZ2 444 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 GOLGA6DP0CG33 693 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 PLCB3Q01970 1234 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 TUBB8Q3ZCM7 444 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 PDZD4Q76G19 769 aaPredicted RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 RTKN2Q8IZC4 609 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 PANK2Q9BZ23 570 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 TM6SF1Q9BZW5 370 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 QTRT2Q9H974 415 aaKnown RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 ZNF408Q9H9D4 720 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 MAGEF1Q9HAY2 307 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 NRBP2Q9NSY0 501 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 GOLGA6AQ9NYA3 693 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 ADD3Q9UEY8 706 aaKnown RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 ANKARQ7Z5J8 1434 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 ABCA5Q8WWZ7 1642 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 MLH3Q9UHC1 1453 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 TRIM37O94972 964 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 BCRP11274 1271 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 PHKG2P15735 406 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 MCM7P33993 719 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 ERCC6LQ2NKX8 1250 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 ZBTB38Q8NAP3 1195 aaPredicted RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 MLKLQ8NB16 471 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 CCDC26Q8TAB7 109 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 IPO4Q8TEX9 1081 aaKnown RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 SMC6Q96SB8 1091 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 TRPC6Q9Y210 931 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 UQCRHLA0A096LP55 91 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 GIGYF1O75420 1035 aaPredicted RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 IVLP07476 585 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 UQCRHP07919 91 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 TFDP1Q14186 410 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 PPP2R5AQ15172 486 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 LETM2Q2VYF4 491 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 PRPF31Q8WWY3 499 aaKnown RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 FAM212AQ96EL1 285 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 USP40Q9NVE5 1235 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 LRWD1Q9UFC0 647 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 FEZ2Q9UHY8 353 aaPredicted RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 TSKSQ9UJT2 592 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 CFAP43Q8NDM7 1665 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 PFDN6O15212 129 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 GPAA1O43292 621 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 RPS6KB1P23443 525 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 POLR2BP30876 1174 aaKnown RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 FAM160A1Q05DH4 1040 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 REXO1Q8N1G1 1221 aaKnown RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 JARID2Q92833 1246 aaPredicted RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 ANAPC4Q9UJX5 808 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 PA2G4Q9UQ80 394 aaKnown RBP8.01□□□□□ -1.13
CCDC171-201ENST00000380701 PCDHB13Q9Y5F0 798 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 FAM135BQ49AJ0 1406 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 KDRP35968 1356 aa8.01□□□□□ -1.13
CCDC171-201ENST00000380701 SSH2Q76I76 1423 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 CTAGE9A4FU28 777 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 CCDC169A6NNP5 214 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 HCLS1P14317 486 aaPredicted RBP8□□□□□ -1.13
CCDC171-201ENST00000380701 CCDC184Q52MB2 194 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 CCDC93Q567U6 631 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 NSMFQ6X4W1 530 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 TRMT1LQ7Z2T5 733 aaKnown RBP8□□□□□ -1.13
CCDC171-201ENST00000380701 GPCPD1Q9NPB8 672 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 DISP1Q96F81 1524 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 TRAF5O00463 557 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 GMNNO75496 209 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 TNFAIP3P21580 790 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 ERCC5P28715 1186 aaPredicted RBP8□□□□□ -1.13
CCDC171-201ENST00000380701 MYL5Q02045 173 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 MFSD14BQ5SR56 506 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 GPATCH4Q5T3I0 446 aaKnown RBP8□□□□□ -1.13
CCDC171-201ENST00000380701 UBL4BQ8N7F7 174 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 CIAO1O76071 339 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 ADRA2BP18089 450 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 EIF4A1P60842 406 aaKnown RBP8□□□□□ -1.13
CCDC171-201ENST00000380701 KCTD2Q14681 263 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 PPP2R5EQ16537 467 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 DHX36Q9H2U1 1008 aaKnown RBP8□□□□□ -1.13
CCDC171-201ENST00000380701 IFT122Q9HBG6 1241 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 ZNF277Q9NRM2 450 aaPredicted RBP8□□□□□ -1.13
CCDC171-201ENST00000380701 ATG3Q9NT62 314 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 TTF2Q9UNY4 1162 aaKnown RBP8□□□□□ -1.13
CCDC171-201ENST00000380701 MYO3BQ8WXR4 1341 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 PTPRKQ15262 1439 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 KDM5DQ9BY66 1539 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 GOLGA8CPA6NN73 597 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 ERVV-1B6SEH8 477 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 DDAH1O94760 285 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 AOC3Q16853 763 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 TTC38Q5R3I4 469 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 LGSNQ5TDP6 509 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 KRT27Q7Z3Y8 459 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 CCDC50Q8IVM0 306 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 RNF34Q969K3 372 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 NACA2Q9H009 215 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 MAP3K15Q6ZN16 1313 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 PPP2R3AQ06190 1150 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms