RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 SMARCC2Q8TAQ2 1214 aa8.57□□□□□ -1.04
GPCPD1-201ENST00000379019 CCDC85AQ96PX6 553 aaPredicted RBP8.57□□□□□ -1.04
GPCPD1-201ENST00000379019 METTL22Q9BUU2 404 aaPredicted RBP8.57□□□□□ -1.04
GPCPD1-201ENST00000379019 ELP1O95163 1332 aa8.57□□□□□ -1.04
GPCPD1-201ENST00000379019 PCCAP05165 728 aaPredicted RBP8.57□□□□□ -1.04
GPCPD1-201ENST00000379019 SF3B3Q15393 1217 aaKnown RBP8.57□□□□□ -1.04
GPCPD1-201ENST00000379019 ZNF771Q7L3S4 317 aaPredicted RBP8.57□□□□□ -1.04
GPCPD1-201ENST00000379019 RPGRQ92834 1020 aaKnown RBP8.57□□□□□ -1.04
GPCPD1-201ENST00000379019 KCNA3P22001 575 aa8.57□□□□□ -1.04
GPCPD1-201ENST00000379019 CCAR1Q8IX12 1150 aaKnown RBP8.57□□□□□ -1.04
GPCPD1-201ENST00000379019 RIN2Q8WYP3 895 aaPredicted RBP8.57□□□□□ -1.04
GPCPD1-201ENST00000379019 FER1L6Q2WGJ9 1857 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 MTX1Q13505 466 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 APTXQ7Z2E3 356 aaKnown RBP8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 GPIHBP1Q8IV16 184 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 FAM184AQ8NB25 1140 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 NLGN2Q8NFZ4 835 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 TRIM10Q9UDY6 481 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 TBC1D2BQ9UPU7 963 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 DUOX1Q9NRD9 1551 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 CASP7P55210 303 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 EXOSC10Q01780 885 aaKnown RBP8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 OSBP2Q969R2 916 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 KIFC2Q96AC6 838 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 CYP46A1Q9Y6A2 500 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 SHC4Q6S5L8 630 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 TRMT44Q8IYL2 757 aaKnown RBP8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 XAGE3Q8WTP9 111 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 ADORA1P30542 326 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 ADKP55263 362 aaKnown RBP8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 FKBP4Q02790 459 aaKnown RBP eCLIP8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 PNOCQ13519 176 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 ATG9AQ7Z3C6 839 aa8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 ZBTB38Q8NAP3 1195 aaPredicted RBP8.56□□□□□ -1.04
GPCPD1-201ENST00000379019 LETM1O95202 739 aaPredicted RBP8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 NLRP10Q86W26 655 aa8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 CWC25Q9NXE8 425 aaPredicted RBP8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 PTPDC1A2A3K4 754 aa8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 HTTP42858 3142 aa8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 COPS6Q7L5N1 327 aa8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 TIAM2Q8IVF5 1701 aa8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 EEF2KMTQ96G04 330 aa8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 TEX33O43247 280 aa8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 PDIA3P30101 505 aaKnown RBP8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 RIC3Q7Z5B4 369 aa8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 METTL16Q86W50 562 aaKnown RBP8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 SP8Q8IXZ3 490 aa8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 CARD6Q9BX69 1037 aa8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 RTFDC1Q9BY42 306 aaPredicted RBP8.55□□□□□ -1.04
GPCPD1-201ENST00000379019 ARHGAP29Q52LW3 1261 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 BICD2Q8TD16 824 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 HMMRO75330 724 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 PTMSP20962 102 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 MCM2P49736 904 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 BMS1Q14692 1282 aaKnown RBP8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 HLFQ16534 295 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 CASC1Q6TDU7 716 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 DRC7Q8IY82 874 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 SMYD4Q8IYR2 804 aaPredicted RBP8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 KLHL34Q8N239 644 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 RCOR1Q9UKL0 485 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 C5orf42Q9H799 3197 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 YBX3P16989 372 aaKnown RBP eCLIP8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 FSTL1Q12841 308 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 PHKBQ93100 1093 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 DNAJC2Q99543 621 aaKnown RBP8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 FAM217BQ9NTX9 383 aaPredicted RBP8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 MYBL2P10244 700 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 KRT85P78386 507 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 CNTROBQ8N137 903 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 LRRC15Q8TF66 581 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 GDAP1L1Q96MZ0 367 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 FUT8Q9BYC5 575 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 TRIM34Q9BYJ4 488 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 PUS7LQ9H0K6 701 aaKnown RBP8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 DIAPH3Q9NSV4 1193 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 BCS1LQ9Y276 419 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 MYH2Q9UKX2 1941 aa8.54□□□□□ -1.04
GPCPD1-201ENST00000379019 TADA3O75528 432 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 LONRF3Q496Y0 759 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 CCDC152Q4G0S7 254 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 LINS1Q8NG48 757 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 EYA3Q99504 573 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 TAOK3Q9H2K8 898 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 RANBP6O60518 1105 aaKnown RBP8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 PDE8AO60658 829 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 CD44P16070 742 aaKnown RBP8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 TMC6Q7Z403 805 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 CCDC112Q8NEF3 446 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 TM6SF1Q9BZW5 370 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 RABEP2Q9H5N1 569 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 ANKZF1Q9H8Y5 726 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 ORC3Q9UBD5 711 aaPredicted RBP8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 GRAPQ13588 217 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 RBM46Q8TBY0 533 aaKnown RBP8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 GRAPLQ8TC17 118 aaPredicted RBP8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 LRRC4CQ9HCJ2 640 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 DNAI1Q9UI46 699 aa8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 TOB1P50616 345 aaPredicted RBP8.53□□□□□ -1.04
GPCPD1-201ENST00000379019 SARM1Q6SZW1 724 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms