RNA–Protein interactions for RNA: ENST00000378551.6

PPM1B-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-204ENST00000378551 CTAGE15A4D2H0 777 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 CTAGE8P0CG41 777 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 CMA1P23946 247 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 GUCY1A2P33402 732 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 KRT9P35527 623 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 USP49Q70CQ1 688 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 CTAGE6Q86UF2 777 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 CTAGE4Q8IX94 777 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 IFNL3Q8IZI9 196 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 FMR1NBQ8N0W7 255 aaPredicted RBP17.54■□□□□ 0.4
PPM1B-204ENST00000378551 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.54■□□□□ 0.4
PPM1B-204ENST00000378551 KRT23Q9C075 422 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 FAM205CA6NFA0 338 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 CCDC96Q2M329 555 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 SPATA5Q8NB90 893 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 MMRN2Q9H8L6 949 aa17.54■□□□□ 0.4
PPM1B-204ENST00000378551 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
PPM1B-204ENST00000378551 PLEKHG1Q9ULL1 1385 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 MPHOSPH10O00566 681 aaKnown RBP17.53■□□□□ 0.4
PPM1B-204ENST00000378551 CHMP4BP1P59074 171 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 PDIA6Q15084 440 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 NOSTRINQ8IVI9 506 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 LMTK2Q8IWU2 1503 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 CTAGE9A4FU28 777 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 FDPSP14324 419 aaKnown RBP17.53■□□□□ 0.4
PPM1B-204ENST00000378551 CACNA2D4Q7Z3S7 1137 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 ACRBPQ8NEB7 543 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 OXER1Q8TDS5 423 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 GPKOWQ92917 476 aaPredicted RBP eCLIP17.53■□□□□ 0.4
PPM1B-204ENST00000378551 CSRNP2Q9H175 543 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 UQCRFS1P1P0C7P4 283 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 GRIN1Q05586 938 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 SLC39A14Q15043 492 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 SPECC1LQ69YQ0 1117 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 CDC5LQ99459 802 aaKnown RBP17.53■□□□□ 0.4
PPM1B-204ENST00000378551 DEPDC5O75140 1603 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 FRMPD1Q5SYB0 1578 aa17.53■□□□□ 0.4
PPM1B-204ENST00000378551 PRR29P0C7W0 189 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 ASIC1P78348 528 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 CADPS2Q86UW7 1296 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 CCDC148Q8NFR7 591 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 SMARCC1Q92922 1105 aaPredicted RBP17.52■□□□□ 0.4
PPM1B-204ENST00000378551 NRKQ7Z2Y5 1582 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 ARAP3Q8WWN8 1544 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 KIAA1210Q9ULL0 1709 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 SYNRGQ9UMZ2 1314 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 AKR1B10O60218 316 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 E4F1Q66K89 784 aaPredicted RBP17.52■□□□□ 0.4
PPM1B-204ENST00000378551 ZNF654Q8IZM8 581 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 ANKRD13CQ8N6S4 541 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 KAT14Q9H8E8 782 aa17.52■□□□□ 0.4
PPM1B-204ENST00000378551 ATP2C2O75185 946 aa17.52■□□□□ 0.39
PPM1B-204ENST00000378551 TOGARAM2Q6ZUX3 1019 aa17.52■□□□□ 0.39
PPM1B-204ENST00000378551 ZNF444Q8N0Y2 327 aaPredicted RBP17.52■□□□□ 0.39
PPM1B-204ENST00000378551 BCCIPQ9P287 314 aaKnown RBP eCLIP17.52■□□□□ 0.39
PPM1B-204ENST00000378551 ARHGAP6O43182 974 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 SPA17Q15506 151 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 DIP2CQ9Y2E4 1556 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 CUTAO60888 179 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 GOLGA8HP0CJ92 632 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 KRT2P35908 639 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 DYNLL1P63167 89 aaKnown RBP17.51■□□□□ 0.39
PPM1B-204ENST00000378551 SMC1AQ14683 1233 aaKnown RBP17.51■□□□□ 0.39
PPM1B-204ENST00000378551 AKNAD1Q5T1N1 836 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 CTR9Q6PD62 1173 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 ATG9AQ7Z3C6 839 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 USP17L12C9JPN9 530 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 USP17L21D6R901 530 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 CASP14P31944 242 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 CCZ1BP86790 482 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 CCZ1P86791 482 aaPredicted RBP17.51■□□□□ 0.39
PPM1B-204ENST00000378551 LETM2Q2VYF4 491 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 LCORLQ8N3X6 602 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 PPLO60437 1756 aa17.51■□□□□ 0.39
PPM1B-204ENST00000378551 CCDC122Q5T0U0 273 aa17.5■□□□□ 0.39
PPM1B-204ENST00000378551 KIF20AO95235 890 aa17.5■□□□□ 0.39
PPM1B-204ENST00000378551 ZSCAN29Q8IWY8 852 aaPredicted RBP17.5■□□□□ 0.39
PPM1B-204ENST00000378551 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
PPM1B-204ENST00000378551 CPVLQ9H3G5 476 aa17.5■□□□□ 0.39
PPM1B-204ENST00000378551 TNKSO95271 1327 aa17.5■□□□□ 0.39
PPM1B-204ENST00000378551 NEDD4P46934 1319 aa17.5■□□□□ 0.39
PPM1B-204ENST00000378551 USP31Q70CQ4 1352 aa17.5■□□□□ 0.39
PPM1B-204ENST00000378551 VWDEQ8N2E2 1590 aa17.5■□□□□ 0.39
PPM1B-204ENST00000378551 RILPL1Q5EBL4 403 aa17.49■□□□□ 0.39
PPM1B-204ENST00000378551 TTC19Q6DKK2 380 aaPredicted RBP17.49■□□□□ 0.39
PPM1B-204ENST00000378551 CDC42BPGQ6DT37 1551 aa17.49■□□□□ 0.39
PPM1B-204ENST00000378551 TEX33O43247 280 aa17.49■□□□□ 0.39
PPM1B-204ENST00000378551 PICALMQ13492 652 aa17.49■□□□□ 0.39
PPM1B-204ENST00000378551 WDR24Q96S15 920 aa17.49■□□□□ 0.39
PPM1B-204ENST00000378551 TFRCP02786 760 aaKnown RBP17.49■□□□□ 0.39
PPM1B-204ENST00000378551 PUM3Q15397 648 aaKnown RBP17.49■□□□□ 0.39
PPM1B-204ENST00000378551 TCERG1LQ5VWI1 586 aa17.49■□□□□ 0.39
PPM1B-204ENST00000378551 SHC4Q6S5L8 630 aa17.49■□□□□ 0.39
PPM1B-204ENST00000378551 IMPACTQ9P2X3 320 aa17.49■□□□□ 0.39
PPM1B-204ENST00000378551 RBM5P52756 815 aaKnown RBP eCLIP17.48■□□□□ 0.39
PPM1B-204ENST00000378551 HLTFQ14527 1009 aaKnown RBP eCLIP17.48■□□□□ 0.39
PPM1B-204ENST00000378551 CCDC152Q4G0S7 254 aa17.48■□□□□ 0.39
PPM1B-204ENST00000378551 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
PPM1B-204ENST00000378551 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.48■□□□□ 0.39
PPM1B-204ENST00000378551 CNNM2Q9H8M5 875 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms