RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 VEGFBP49765 207 aa15.87■□□□□ 0.13
CKAP2-202ENST00000378034 MFAP1P55081 439 aaKnown RBP15.87■□□□□ 0.13
CKAP2-202ENST00000378034 CYP4F22Q6NT55 531 aa15.87■□□□□ 0.13
CKAP2-202ENST00000378034 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.87■□□□□ 0.13
CKAP2-202ENST00000378034 GSG1L2A8MUP6 293 aa15.87■□□□□ 0.13
CKAP2-202ENST00000378034 PHF20L1A8MW92 1017 aa15.87■□□□□ 0.13
CKAP2-202ENST00000378034 PATL2C9JE40 543 aaKnown RBP15.87■□□□□ 0.13
CKAP2-202ENST00000378034 NMIQ13287 307 aaPredicted RBP15.87■□□□□ 0.13
CKAP2-202ENST00000378034 NOL9Q5SY16 702 aaKnown RBP15.87■□□□□ 0.13
CKAP2-202ENST00000378034 CRACR2BQ8N4Y2 399 aaPredicted RBP15.87■□□□□ 0.13
CKAP2-202ENST00000378034 TRIM34Q9BYJ4 488 aa15.87■□□□□ 0.13
CKAP2-202ENST00000378034 NACAP1Q9BZK3 213 aa15.87■□□□□ 0.13
CKAP2-202ENST00000378034 A0A0D9SFI3 127 aa15.86■□□□□ 0.13
CKAP2-202ENST00000378034 NOGQ13253 232 aa15.86■□□□□ 0.13
CKAP2-202ENST00000378034 BMP2KLQ5H9B9 411 aa15.86■□□□□ 0.13
CKAP2-202ENST00000378034 RASAL3Q86YV0 1011 aa15.86■□□□□ 0.13
CKAP2-202ENST00000378034 FAM227BQ96M60 508 aa15.86■□□□□ 0.13
CKAP2-202ENST00000378034 SERPINB13Q9UIV8 391 aa15.86■□□□□ 0.13
CKAP2-202ENST00000378034 FAM155AB1AL88 458 aaPredicted RBP15.86■□□□□ 0.13
CKAP2-202ENST00000378034 CTNND1O60716 968 aaKnown RBP15.86■□□□□ 0.13
CKAP2-202ENST00000378034 MAP2K2P36507 400 aa15.86■□□□□ 0.13
CKAP2-202ENST00000378034 VGLL4Q14135 290 aa15.86■□□□□ 0.13
CKAP2-202ENST00000378034 SBK1Q52WX2 424 aa15.86■□□□□ 0.13
CKAP2-202ENST00000378034 CLMNQ96JQ2 1002 aa15.86■□□□□ 0.13
CKAP2-202ENST00000378034 ARPP21Q9UBL0 812 aaPredicted RBP15.86■□□□□ 0.13
CKAP2-202ENST00000378034 THSD7BQ9C0I4 1608 aa15.85■□□□□ 0.13
CKAP2-202ENST00000378034 BAZ2AQ9UIF9 1905 aaKnown RBP15.85■□□□□ 0.13
CKAP2-202ENST00000378034 ZBTB48P10074 688 aaPredicted RBP15.85■□□□□ 0.13
CKAP2-202ENST00000378034 APPP05067 770 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 INPP5BP32019 993 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 PLCD1P51178 756 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 C12orf60Q5U649 245 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 REM2Q8IYK8 340 aaPredicted RBP15.84■□□□□ 0.13
CKAP2-202ENST00000378034 IFNL3Q8IZI9 196 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 RUFY2Q8WXA3 655 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 ZKSCAN4Q969J2 545 aaPredicted RBP15.84■□□□□ 0.13
CKAP2-202ENST00000378034 GINM1Q9NU53 330 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 SNCAIPQ9Y6H5 919 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 CCDC171Q6TFL3 1326 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 USP17L12C9JPN9 530 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 USP17L21D6R901 530 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 SPRYD7Q5W111 196 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 CTR9Q6PD62 1173 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 CWC27Q6UX04 472 aaKnown RBP15.84■□□□□ 0.13
CKAP2-202ENST00000378034 CCDC129Q6ZRS4 1044 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 ERO1BQ86YB8 467 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 SCYL3Q8IZE3 742 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 JMYQ8N9B5 988 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 WNK4Q96J92 1243 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 ELP3Q9H9T3 547 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 SWAP70Q9UH65 585 aa15.84■□□□□ 0.13
CKAP2-202ENST00000378034 DOCK1Q14185 1865 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 SPDYE5A6NIY4 337 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 CHMLP26374 656 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 TDO2P48775 406 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 GABPAQ06546 454 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 GRM1Q13255 1194 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 TATDN1Q6P1N9 297 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 SKAP1Q86WV1 359 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 DNAJC18Q9H819 358 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 PICK1Q9NRD5 415 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 RAD50Q92878 1312 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 LAMB1P07942 1786 aa15.83■□□□□ 0.12
CKAP2-202ENST00000378034 FAM196BA6NMK8 535 aa15.82■□□□□ 0.12
CKAP2-202ENST00000378034 CAP2P40123 477 aa15.82■□□□□ 0.12
CKAP2-202ENST00000378034 PPATQ06203 517 aa15.82■□□□□ 0.12
CKAP2-202ENST00000378034 ALX1Q15699 326 aa15.82■□□□□ 0.12
CKAP2-202ENST00000378034 SLC4A8Q2Y0W8 1093 aa15.82■□□□□ 0.12
CKAP2-202ENST00000378034 OPTNQ96CV9 577 aa15.82■□□□□ 0.12
CKAP2-202ENST00000378034 EPB41L4AQ9HCS5 686 aaPredicted RBP15.82■□□□□ 0.12
CKAP2-202ENST00000378034 SLURP2P0DP57 97 aa15.82■□□□□ 0.12
CKAP2-202ENST00000378034 ZNF589Q86UQ0 364 aaPredicted RBP15.82■□□□□ 0.12
CKAP2-202ENST00000378034 NAPBQ9H115 298 aa15.82■□□□□ 0.12
CKAP2-202ENST00000378034 ZMYM6O95789 1325 aa15.82■□□□□ 0.12
CKAP2-202ENST00000378034 CYP2D6P10635 497 aa15.81■□□□□ 0.12
CKAP2-202ENST00000378034 TBC1D2Q9BYX2 928 aa15.81■□□□□ 0.12
CKAP2-202ENST00000378034 ATAD5Q96QE3 1844 aa15.81■□□□□ 0.12
CKAP2-202ENST00000378034 FOXP2O15409 715 aa15.8■□□□□ 0.12
CKAP2-202ENST00000378034 AOC2O75106 756 aa15.8■□□□□ 0.12
CKAP2-202ENST00000378034 HSPD1P10809 573 aaKnown RBP15.8■□□□□ 0.12
CKAP2-202ENST00000378034 INHBEP58166 350 aa15.8■□□□□ 0.12
CKAP2-202ENST00000378034 PPIL2Q13356 520 aa15.8■□□□□ 0.12
CKAP2-202ENST00000378034 C16orf86Q6ZW13 317 aa15.8■□□□□ 0.12
CKAP2-202ENST00000378034 ROBO3Q96MS0 1386 aa15.8■□□□□ 0.12
CKAP2-202ENST00000378034 MANSC4A6NHS7 340 aaPredicted RBP15.8■□□□□ 0.12
CKAP2-202ENST00000378034 ASNSP08243 561 aa15.8■□□□□ 0.12
CKAP2-202ENST00000378034 PTPRAP18433 802 aa15.8■□□□□ 0.12
CKAP2-202ENST00000378034 SHMT1P34896 483 aa15.8■□□□□ 0.12
CKAP2-202ENST00000378034 KIF23Q02241 960 aaPredicted RBP15.8■□□□□ 0.12
CKAP2-202ENST00000378034 MAP2K1Q02750 393 aaPredicted RBP15.8■□□□□ 0.12
CKAP2-202ENST00000378034 VPS53Q5VIR6 699 aa15.8■□□□□ 0.12
CKAP2-202ENST00000378034 ZNF287Q9HBT7 754 aa15.8■□□□□ 0.12
CKAP2-202ENST00000378034 MYH8P13535 1937 aa15.79■□□□□ 0.12
CKAP2-202ENST00000378034 CYP2D7A0A087X1C5 515 aa15.79■□□□□ 0.12
CKAP2-202ENST00000378034 MINDY4BA8MYZ0 360 aa15.79■□□□□ 0.12
CKAP2-202ENST00000378034 SLC3A2P08195 630 aaKnown RBP15.79■□□□□ 0.12
CKAP2-202ENST00000378034 SREBF2Q12772 1141 aa15.79■□□□□ 0.12
CKAP2-202ENST00000378034 CERKLQ49MI3 558 aaPredicted RBP15.79■□□□□ 0.12
CKAP2-202ENST00000378034 OTUD5Q96G74 571 aa15.79■□□□□ 0.12
CKAP2-202ENST00000378034 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms