RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 USP49Q70CQ1 688 aa18.06■□□□□ 0.48
CKAP4-201ENST00000378026 FAM71BQ8TC56 605 aa18.06■□□□□ 0.48
CKAP4-201ENST00000378026 MRC1P22897 1456 aa18.06■□□□□ 0.48
CKAP4-201ENST00000378026 BTBD18B2RXH4 712 aa18.05■□□□□ 0.48
CKAP4-201ENST00000378026 MICALL1Q8N3F8 863 aa18.05■□□□□ 0.48
CKAP4-201ENST00000378026 SLC26A6Q9BXS9 759 aa18.05■□□□□ 0.48
CKAP4-201ENST00000378026 INCENPQ9NQS7 918 aa18.05■□□□□ 0.48
CKAP4-201ENST00000378026 KCNJ14Q9UNX9 436 aa18.05■□□□□ 0.48
CKAP4-201ENST00000378026 MYO1BO43795 1136 aa18.05■□□□□ 0.48
CKAP4-201ENST00000378026 CDC25AP30304 524 aa18.05■□□□□ 0.48
CKAP4-201ENST00000378026 CCT6AP40227 531 aaKnown RBP18.05■□□□□ 0.48
CKAP4-201ENST00000378026 IARSP41252 1262 aaKnown RBP18.05■□□□□ 0.48
CKAP4-201ENST00000378026 MLKLQ8NB16 471 aa18.05■□□□□ 0.48
CKAP4-201ENST00000378026 KCNA6P17658 529 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 ADORA1P30542 326 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 CYB5R4Q7L1T6 521 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 NAPGQ99747 312 aaPredicted RBP18.04■□□□□ 0.48
CKAP4-201ENST00000378026 DIP2AQ14689 1571 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 ENC1O14682 589 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 ARHGEF25Q86VW2 580 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 PANX2Q96RD6 677 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 MKRN1Q9UHC7 482 aaKnown RBP18.04■□□□□ 0.48
CKAP4-201ENST00000378026 PHF8Q9UPP1 1060 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 PLEKHG1Q9ULL1 1385 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 FXR1P51114 621 aaKnown RBP eCLIP18.04■□□□□ 0.48
CKAP4-201ENST00000378026 CORO7P57737 925 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 CPLX2Q6PUV4 134 aaKnown RBP18.04■□□□□ 0.48
CKAP4-201ENST00000378026 PPM1EQ8WY54 764 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 SLF1Q9BQI6 1058 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 DACH1Q9UI36 760 aa18.04■□□□□ 0.48
CKAP4-201ENST00000378026 A0A1B0GTH6 734 aa18.03■□□□□ 0.48
CKAP4-201ENST00000378026 B4E1Z4 1266 aa18.03■□□□□ 0.48
CKAP4-201ENST00000378026 SCARF1Q14162 830 aa18.03■□□□□ 0.48
CKAP4-201ENST00000378026 ANGEL1Q9UNK9 670 aaKnown RBP18.03■□□□□ 0.48
CKAP4-201ENST00000378026 MORC3Q14149 939 aa18.03■□□□□ 0.48
CKAP4-201ENST00000378026 TAF7LQ5H9L4 462 aa18.03■□□□□ 0.48
CKAP4-201ENST00000378026 GSPT2Q8IYD1 628 aaKnown RBP18.03■□□□□ 0.48
CKAP4-201ENST00000378026 AFAP1L1Q8TED9 768 aa18.03■□□□□ 0.48
CKAP4-201ENST00000378026 TRIM10Q9UDY6 481 aa18.03■□□□□ 0.48
CKAP4-201ENST00000378026 ZMYM6O95789 1325 aa18.03■□□□□ 0.48
CKAP4-201ENST00000378026 GPAA1O43292 621 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 CMTR1Q8N1G2 835 aaKnown RBP18.02■□□□□ 0.48
CKAP4-201ENST00000378026 GBP3Q9H0R5 595 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 HDAC6Q9UBN7 1215 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 GUCA1BQ9UMX6 200 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 RANBP6O60518 1105 aaKnown RBP18.02■□□□□ 0.48
CKAP4-201ENST00000378026 ZAP70P43403 619 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 FOXO4P98177 505 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 FBXL16Q8N461 479 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 STAMQ92783 540 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 CAPZA3Q96KX2 299 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 ACBD3Q9H3P7 528 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 DEF6Q9H4E7 631 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 RGPD2P0DJD1 1756 aa18.02■□□□□ 0.48
CKAP4-201ENST00000378026 GOLGA8AA7E2F4 631 aa18.02■□□□□ 0.47
CKAP4-201ENST00000378026 MFAP3LO75121 409 aa18.02■□□□□ 0.47
CKAP4-201ENST00000378026 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.02■□□□□ 0.47
CKAP4-201ENST00000378026 TFR2Q9UP52 801 aa18.02■□□□□ 0.47
CKAP4-201ENST00000378026 SRGAP2O75044 1071 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 GUCY1A2P33402 732 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 IL15P40933 162 aaPredicted RBP18.01■□□□□ 0.47
CKAP4-201ENST00000378026 APOA5Q6Q788 366 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 RASGRP2Q7LDG7 609 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 MYO6Q9UM54 1294 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 TSPOAP1O95153 1857 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 FAM237AA0A1B0GTK4 181 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 RPS6KA5O75582 802 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 CDKL5O76039 1030 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 CD44P16070 742 aaKnown RBP18.01■□□□□ 0.47
CKAP4-201ENST00000378026 GUCY2CP25092 1073 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 PLCD1P51178 756 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 PIP4K2BP78356 416 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 ESCO1Q5FWF5 840 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 TBC1D10CQ8IV04 446 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 PCDHB6Q9Y5E3 794 aa18.01■□□□□ 0.47
CKAP4-201ENST00000378026 ZBTB43O43298 467 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 SYF2O95926 243 aaKnown RBP18■□□□□ 0.47
CKAP4-201ENST00000378026 LIG3P49916 1009 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 TOB1P50616 345 aaPredicted RBP18■□□□□ 0.47
CKAP4-201ENST00000378026 PPP1R3FQ6ZSY5 799 aaPredicted RBP18■□□□□ 0.47
CKAP4-201ENST00000378026 TTC5Q8N0Z6 440 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 SMARCC1Q92922 1105 aaPredicted RBP18■□□□□ 0.47
CKAP4-201ENST00000378026 PPFIA4O75335 1185 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 GYPCP04921 128 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 NR5A1Q13285 461 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 CCDC148Q8NFR7 591 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 NUP88Q99567 741 aaPredicted RBP18■□□□□ 0.47
CKAP4-201ENST00000378026 VPS16Q9H269 839 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 AXIN2Q9Y2T1 843 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 UBN2Q6ZU65 1347 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 RNF225M0QZC1 329 aaPredicted RBP18■□□□□ 0.47
CKAP4-201ENST00000378026 EYA2O00167 538 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 ERVK-24P63145 666 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 DNAJC21Q5F1R6 531 aaKnown RBP18■□□□□ 0.47
CKAP4-201ENST00000378026 NOSTRINQ8IVI9 506 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 DIS3L2Q8IYB7 885 aaKnown RBP18■□□□□ 0.47
CKAP4-201ENST00000378026 CEP126Q9P2H0 1117 aa18■□□□□ 0.47
CKAP4-201ENST00000378026 CASP7P55210 303 aa17.99■□□□□ 0.47
CKAP4-201ENST00000378026 FILIP1LQ4L180 1135 aa17.99■□□□□ 0.47
CKAP4-201ENST00000378026 MED4Q9NPJ6 270 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms