RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 HLA-DOAP06340 250 aa20.85■□□□□ 0.93
USP11-202ENST00000377078 PRRT2Q7Z6L0 340 aaPredicted RBP20.85■□□□□ 0.93
USP11-202ENST00000377078 ADGRA1Q86SQ6 560 aa20.85■□□□□ 0.93
USP11-202ENST00000377078 CRACR2BQ8N4Y2 399 aaPredicted RBP20.85■□□□□ 0.93
USP11-202ENST00000377078 PTPN22Q9Y2R2 807 aa20.85■□□□□ 0.93
USP11-202ENST00000377078 AFG3L2Q9Y4W6 797 aa20.85■□□□□ 0.93
USP11-202ENST00000377078 DOCK1Q14185 1865 aa20.84■□□□□ 0.93
USP11-202ENST00000377078 FAM196BA6NMK8 535 aa20.84■□□□□ 0.93
USP11-202ENST00000377078 USP5P45974 858 aa20.84■□□□□ 0.93
USP11-202ENST00000377078 MIGA1Q8NAN2 632 aa20.84■□□□□ 0.93
USP11-202ENST00000377078 NDUFB9Q9Y6M9 179 aa20.84■□□□□ 0.93
USP11-202ENST00000377078 TRIM75PA6NK02 468 aa20.83■□□□□ 0.93
USP11-202ENST00000377078 GNRH1P01148 92 aa20.83■□□□□ 0.93
USP11-202ENST00000377078 GADL1Q6ZQY3 521 aa20.83■□□□□ 0.93
USP11-202ENST00000377078 FOXP4Q8IVH2 680 aaPredicted RBP20.83■□□□□ 0.93
USP11-202ENST00000377078 DNAJC2Q99543 621 aaKnown RBP20.83■□□□□ 0.93
USP11-202ENST00000377078 LRRCC1Q9C099 1032 aa20.83■□□□□ 0.93
USP11-202ENST00000377078 ANTXR1Q9H6X2 564 aa20.83■□□□□ 0.93
USP11-202ENST00000377078 SLURP2P0DP57 97 aa20.82■□□□□ 0.92
USP11-202ENST00000377078 CAP2P40123 477 aa20.82■□□□□ 0.92
USP11-202ENST00000377078 DYNLL1P63167 89 aaKnown RBP20.82■□□□□ 0.92
USP11-202ENST00000377078 LACTBP83111 547 aaPredicted RBP20.82■□□□□ 0.92
USP11-202ENST00000377078 MOGSQ13724 837 aa20.82■□□□□ 0.92
USP11-202ENST00000377078 AS3MTQ9HBK9 375 aa20.82■□□□□ 0.92
USP11-202ENST00000377078 SLC45A1Q9Y2W3 748 aa20.82■□□□□ 0.92
USP11-202ENST00000377078 GOLIM4O00461 696 aa20.81■□□□□ 0.92
USP11-202ENST00000377078 ASNSP08243 561 aa20.81■□□□□ 0.92
USP11-202ENST00000377078 SLC9C2Q5TAH2 1124 aa20.81■□□□□ 0.92
USP11-202ENST00000377078 C17orf99Q6UX52 265 aa20.81■□□□□ 0.92
USP11-202ENST00000377078 ZNF280CQ8ND82 737 aa20.81■□□□□ 0.92
USP11-202ENST00000377078 CPA4Q9UI42 421 aa20.81■□□□□ 0.92
USP11-202ENST00000377078 PALD1Q9ULE6 856 aa20.81■□□□□ 0.92
USP11-202ENST00000377078 MYO5AQ9Y4I1 1855 aaKnown RBP20.81■□□□□ 0.92
USP11-202ENST00000377078 USP17L5A8MUK1 530 aa20.8■□□□□ 0.92
USP11-202ENST00000377078 GPAT2Q6NUI2 795 aa20.8■□□□□ 0.92
USP11-202ENST00000377078 NBPF11Q86T75 865 aa20.8■□□□□ 0.92
USP11-202ENST00000377078 GINM1Q9NU53 330 aa20.8■□□□□ 0.92
USP11-202ENST00000377078 SAP30BPQ9UHR5 308 aaKnown RBP20.8■□□□□ 0.92
USP11-202ENST00000377078 PNMA3Q9UL41 463 aa20.8■□□□□ 0.92
USP11-202ENST00000377078 MAGEB6P1A0A0J9YX57 407 aa20.79■□□□□ 0.92
USP11-202ENST00000377078 ATP5JP18859 108 aa20.79■□□□□ 0.92
USP11-202ENST00000377078 HOXD10P28358 340 aa20.79■□□□□ 0.92
USP11-202ENST00000377078 PRMT2P55345 433 aa20.79■□□□□ 0.92
USP11-202ENST00000377078 SPP2Q13103 211 aa20.79■□□□□ 0.92
USP11-202ENST00000377078 PABPC4Q13310 644 aaKnown RBP eCLIP20.79■□□□□ 0.92
USP11-202ENST00000377078 METTL16Q86W50 562 aaKnown RBP20.79■□□□□ 0.92
USP11-202ENST00000377078 SMCR8Q8TEV9 937 aaPredicted RBP20.79■□□□□ 0.92
USP11-202ENST00000377078 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.79■□□□□ 0.92
USP11-202ENST00000377078 AGTPBP1Q9UPW5 1226 aa20.79■□□□□ 0.92
USP11-202ENST00000377078 HTTP42858 3142 aa20.79■□□□□ 0.92
USP11-202ENST00000377078 FOCADQ5VW36 1801 aa20.78■□□□□ 0.92
USP11-202ENST00000377078 CYP2C8P10632 490 aa20.78■□□□□ 0.92
USP11-202ENST00000377078 PDE6AP16499 860 aa20.78■□□□□ 0.92
USP11-202ENST00000377078 SLC9C1Q4G0N8 1177 aa20.78■□□□□ 0.92
USP11-202ENST00000377078 TTC6Q86TZ1 520 aa20.78■□□□□ 0.92
USP11-202ENST00000377078 PROCA1Q8NCQ7 364 aaPredicted RBP20.78■□□□□ 0.92
USP11-202ENST00000377078 GPATCH3Q96I76 525 aa20.78■□□□□ 0.92
USP11-202ENST00000377078 CRNKL1Q9BZJ0 848 aaKnown RBP20.78■□□□□ 0.92
USP11-202ENST00000377078 PAG1Q9NWQ8 432 aa20.78■□□□□ 0.92
USP11-202ENST00000377078 ADGRA2Q96PE1 1338 aa20.78■□□□□ 0.92
USP11-202ENST00000377078 CCDC84Q86UT8 332 aaPredicted RBP20.77■□□□□ 0.92
USP11-202ENST00000377078 ARMC5Q96C12 935 aa20.77■□□□□ 0.92
USP11-202ENST00000377078 BOLA2Q9H3K6 86 aa20.77■□□□□ 0.92
USP11-202ENST00000377078 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.77■□□□□ 0.92
USP11-202ENST00000377078 FMNL1O95466 1100 aaPredicted RBP20.76■□□□□ 0.91
USP11-202ENST00000377078 PSMC4P43686 418 aa20.76■□□□□ 0.91
USP11-202ENST00000377078 HAUS7Q99871 368 aa20.76■□□□□ 0.91
USP11-202ENST00000377078 SERPINB13Q9UIV8 391 aa20.76■□□□□ 0.91
USP11-202ENST00000377078 PTCH2Q9Y6C5 1203 aa20.76■□□□□ 0.91
USP11-202ENST00000377078 ZNF532Q9HCE3 1301 aa20.76■□□□□ 0.91
USP11-202ENST00000377078 CDK5RAP2Q96SN8 1893 aa20.75■□□□□ 0.91
USP11-202ENST00000377078 POLR3DP05423 398 aaPredicted RBP20.75■□□□□ 0.91
USP11-202ENST00000377078 FCGRTP55899 365 aa20.75■□□□□ 0.91
USP11-202ENST00000377078 RRP1P56182 461 aaKnown RBP20.75■□□□□ 0.91
USP11-202ENST00000377078 SLC4A8Q2Y0W8 1093 aa20.75■□□□□ 0.91
USP11-202ENST00000377078 RIOK1Q9BRS2 568 aaKnown RBP20.75■□□□□ 0.91
USP11-202ENST00000377078 WDR18Q9BV38 432 aa20.75■□□□□ 0.91
USP11-202ENST00000377078 ARHGAP39Q9C0H5 1083 aa20.75■□□□□ 0.91
USP11-202ENST00000377078 EHD4Q9H223 541 aa20.75■□□□□ 0.91
USP11-202ENST00000377078 TMOD4Q9NZQ9 345 aa20.75■□□□□ 0.91
USP11-202ENST00000377078 PHIPQ8WWQ0 1821 aa20.74■□□□□ 0.91
USP11-202ENST00000377078 ATAD5Q96QE3 1844 aa20.74■□□□□ 0.91
USP11-202ENST00000377078 BCRP11274 1271 aa20.74■□□□□ 0.91
USP11-202ENST00000377078 CENPFP49454 3210 aa20.74■□□□□ 0.91
USP11-202ENST00000377078 HMGCS2P54868 508 aa20.74■□□□□ 0.91
USP11-202ENST00000377078 CAP1Q01518 475 aa20.74■□□□□ 0.91
USP11-202ENST00000377078 RRP1BQ14684 758 aaKnown RBP20.74■□□□□ 0.91
USP11-202ENST00000377078 ZSCAN25Q6NSZ9 544 aa20.74■□□□□ 0.91
USP11-202ENST00000377078 DCTPP1Q9H773 170 aa20.74■□□□□ 0.91
USP11-202ENST00000377078 DNAJC18Q9H819 358 aa20.74■□□□□ 0.91
USP11-202ENST00000377078 PTPRFP10586 1907 aa20.74■□□□□ 0.91
USP11-202ENST00000377078 SMARCA5O60264 1052 aaPredicted RBP20.73■□□□□ 0.91
USP11-202ENST00000377078 ECM2O94769 699 aaPredicted RBP20.73■□□□□ 0.91
USP11-202ENST00000377078 GDF11O95390 407 aa20.73■□□□□ 0.91
USP11-202ENST00000377078 OSBPP22059 807 aa20.73■□□□□ 0.91
USP11-202ENST00000377078 SH3D19Q5HYK7 790 aa20.73■□□□□ 0.91
USP11-202ENST00000377078 TRIM47Q96LD4 638 aa20.73■□□□□ 0.91
USP11-202ENST00000377078 YTHDC1Q96MU7 727 aaKnown RBP20.73■□□□□ 0.91
USP11-202ENST00000377078 TMEM106CQ9BVX2 250 aa20.73■□□□□ 0.91
USP11-202ENST00000377078 ECHDC1Q9NTX5 307 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms