RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 C9orf78Q9NZ63 289 aaPredicted RBP13.68□□□□□ -0.22
DDX39B-201ENST00000376177 VAMP4O75379 141 aa13.67□□□□□ -0.22
DDX39B-201ENST00000376177 NBPF7P0C2Y1 421 aaPredicted RBP13.67□□□□□ -0.22
DDX39B-201ENST00000376177 LHX8Q68G74 356 aa13.67□□□□□ -0.22
DDX39B-201ENST00000376177 TTYH1Q9H313 450 aaPredicted RBP13.67□□□□□ -0.22
DDX39B-201ENST00000376177 SEMA6BQ9H3T3 888 aa13.67□□□□□ -0.22
DDX39B-201ENST00000376177 DDX4Q9NQI0 724 aaKnown RBP13.67□□□□□ -0.22
DDX39B-201ENST00000376177 SUGT1Q9Y2Z0 365 aa13.67□□□□□ -0.22
DDX39B-201ENST00000376177 RFX7Q2KHR2 1363 aa13.67□□□□□ -0.22
DDX39B-201ENST00000376177 FGFR2P21802 821 aa13.66□□□□□ -0.22
DDX39B-201ENST00000376177 CACNB2Q08289 660 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-201ENST00000376177 CCL14Q16627 93 aa13.66□□□□□ -0.22
DDX39B-201ENST00000376177 C9orf50Q5SZB4 431 aa13.66□□□□□ -0.22
DDX39B-201ENST00000376177 ANKRD44Q8N8A2 993 aa13.66□□□□□ -0.22
DDX39B-201ENST00000376177 BICC1Q9H694 974 aaKnown RBP13.66□□□□□ -0.22
DDX39B-201ENST00000376177 RLFQ13129 1914 aa13.66□□□□□ -0.22
DDX39B-201ENST00000376177 ANP32AP39687 249 aaKnown RBP13.65□□□□□ -0.22
DDX39B-201ENST00000376177 IRX6P78412 446 aaPredicted RBP13.65□□□□□ -0.22
DDX39B-201ENST00000376177 ZSCAN29Q8IWY8 852 aaPredicted RBP13.65□□□□□ -0.22
DDX39B-201ENST00000376177 USP38Q8NB14 1042 aa13.65□□□□□ -0.22
DDX39B-201ENST00000376177 LRRFIP2Q9Y608 721 aaKnown RBP13.65□□□□□ -0.22
DDX39B-201ENST00000376177 SIPA1L1O43166 1804 aa13.64□□□□□ -0.23
DDX39B-201ENST00000376177 MAP3K10Q02779 954 aa13.64□□□□□ -0.23
DDX39B-201ENST00000376177 RRP1BQ14684 758 aaKnown RBP13.64□□□□□ -0.23
DDX39B-201ENST00000376177 SHHQ15465 462 aa13.64□□□□□ -0.23
DDX39B-201ENST00000376177 SLC4A10Q6U841 1118 aa13.64□□□□□ -0.23
DDX39B-201ENST00000376177 WWC1Q8IX03 1113 aa13.64□□□□□ -0.23
DDX39B-201ENST00000376177 ASCC2Q9H1I8 757 aaPredicted RBP13.64□□□□□ -0.23
DDX39B-201ENST00000376177 ATN1P54259 1190 aaPredicted RBP13.64□□□□□ -0.23
DDX39B-201ENST00000376177 HMGCS2P54868 508 aa13.64□□□□□ -0.23
DDX39B-201ENST00000376177 SPP2Q13103 211 aa13.64□□□□□ -0.23
DDX39B-201ENST00000376177 WDR66Q8TBY9 1149 aa13.64□□□□□ -0.23
DDX39B-201ENST00000376177 CCDC136Q96JN2 1154 aa13.64□□□□□ -0.23
DDX39B-201ENST00000376177 TXNRD2Q9NNW7 524 aa13.64□□□□□ -0.23
DDX39B-201ENST00000376177 NOP58Q9Y2X3 529 aaKnown RBP13.64□□□□□ -0.23
DDX39B-201ENST00000376177 CTNND1O60716 968 aaKnown RBP13.63□□□□□ -0.23
DDX39B-201ENST00000376177 EXOSC9Q06265 439 aaKnown RBP13.63□□□□□ -0.23
DDX39B-201ENST00000376177 PICALMQ13492 652 aa13.63□□□□□ -0.23
DDX39B-201ENST00000376177 B4GALNT3Q6L9W6 998 aa13.63□□□□□ -0.23
DDX39B-201ENST00000376177 IDI2Q9BXS1 227 aa13.63□□□□□ -0.23
DDX39B-201ENST00000376177 SENP6Q9GZR1 1112 aaPredicted RBP13.63□□□□□ -0.23
DDX39B-201ENST00000376177 PNMA3Q9UL41 463 aa13.63□□□□□ -0.23
DDX39B-201ENST00000376177 GCLCP48506 637 aaPredicted RBP13.62□□□□□ -0.23
DDX39B-201ENST00000376177 PUM3Q15397 648 aaKnown RBP13.62□□□□□ -0.23
DDX39B-201ENST00000376177 RABL6Q3YEC7 729 aaPredicted RBP13.62□□□□□ -0.23
DDX39B-201ENST00000376177 PROCA1Q8NCQ7 364 aaPredicted RBP13.62□□□□□ -0.23
DDX39B-201ENST00000376177 LBHD1Q9BQE6 289 aaPredicted RBP13.62□□□□□ -0.23
DDX39B-201ENST00000376177 ENTPD3O75355 529 aa13.61□□□□□ -0.23
DDX39B-201ENST00000376177 ALDH1L1O75891 902 aa13.61□□□□□ -0.23
DDX39B-201ENST00000376177 LDHBP07195 334 aaKnown RBP13.61□□□□□ -0.23
DDX39B-201ENST00000376177 FOSL2P15408 326 aa13.61□□□□□ -0.23
DDX39B-201ENST00000376177 POTEEQ6S8J3 1075 aa13.61□□□□□ -0.23
DDX39B-201ENST00000376177 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
DDX39B-201ENST00000376177 MORF4L1Q9UBU8 362 aa13.61□□□□□ -0.23
DDX39B-201ENST00000376177 KIF16BQ96L93 1317 aa13.6□□□□□ -0.23
DDX39B-201ENST00000376177 CHD9Q3L8U1 2897 aa13.6□□□□□ -0.23
DDX39B-201ENST00000376177 IFIT1P09914 478 aaKnown RBP13.6□□□□□ -0.23
DDX39B-201ENST00000376177 ZKSCAN1P17029 563 aaPredicted RBP13.6□□□□□ -0.23
DDX39B-201ENST00000376177 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
DDX39B-201ENST00000376177 Q3C1V9 767 aa13.6□□□□□ -0.23
DDX39B-201ENST00000376177 USP6NLQ92738 828 aa13.6□□□□□ -0.23
DDX39B-201ENST00000376177 P2RX7Q99572 595 aaKnown RBP13.6□□□□□ -0.23
DDX39B-201ENST00000376177 NUDT12Q9BQG2 462 aa13.6□□□□□ -0.23
DDX39B-201ENST00000376177 PORCNQ9H237 461 aa13.6□□□□□ -0.23
DDX39B-201ENST00000376177 UTYO14607 1347 aa13.6□□□□□ -0.23
DDX39B-201ENST00000376177 GAKO14976 1311 aa13.6□□□□□ -0.23
DDX39B-201ENST00000376177 TNFRSF10AO00220 468 aa13.59□□□□□ -0.23
DDX39B-201ENST00000376177 MS4A1P11836 297 aa13.59□□□□□ -0.23
DDX39B-201ENST00000376177 ZNF280CQ8ND82 737 aa13.59□□□□□ -0.23
DDX39B-201ENST00000376177 FLRT1Q9NZU1 646 aa13.59□□□□□ -0.23
DDX39B-201ENST00000376177 XIRP2A4UGR9 3374 aa13.59□□□□□ -0.23
DDX39B-201ENST00000376177 CDK5RAP2Q96SN8 1893 aa13.59□□□□□ -0.23
DDX39B-201ENST00000376177 PHKA1P46020 1223 aa13.59□□□□□ -0.23
DDX39B-201ENST00000376177 RTP1P59025 263 aa13.59□□□□□ -0.23
DDX39B-201ENST00000376177 JAG1P78504 1218 aa13.59□□□□□ -0.23
DDX39B-201ENST00000376177 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
DDX39B-201ENST00000376177 XRCC5P13010 732 aaKnown RBP13.58□□□□□ -0.24
DDX39B-201ENST00000376177 SLC5A1P13866 664 aa13.58□□□□□ -0.24
DDX39B-201ENST00000376177 PLA2G5P39877 138 aa13.58□□□□□ -0.24
DDX39B-201ENST00000376177 BTDP43251 543 aa13.58□□□□□ -0.24
DDX39B-201ENST00000376177 RFX5P48382 616 aaPredicted RBP13.58□□□□□ -0.24
DDX39B-201ENST00000376177 ATG9AQ7Z3C6 839 aa13.58□□□□□ -0.24
DDX39B-201ENST00000376177 SYMPKQ92797 1274 aaKnown RBP13.58□□□□□ -0.24
DDX39B-201ENST00000376177 BADQ92934 168 aa13.58□□□□□ -0.24
DDX39B-201ENST00000376177 IPO9Q96P70 1041 aaKnown RBP13.58□□□□□ -0.24
DDX39B-201ENST00000376177 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.58□□□□□ -0.24
DDX39B-201ENST00000376177 RBPJLQ9UBG7 517 aa13.58□□□□□ -0.24
DDX39B-201ENST00000376177 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
DDX39B-201ENST00000376177 NDUFB9Q9Y6M9 179 aa13.58□□□□□ -0.24
DDX39B-201ENST00000376177 RHBDL3P58872 404 aa13.57□□□□□ -0.24
DDX39B-201ENST00000376177 TJAP1Q5JTD0 557 aa13.57□□□□□ -0.24
DDX39B-201ENST00000376177 MORN1Q5T089 497 aa13.57□□□□□ -0.24
DDX39B-201ENST00000376177 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
DDX39B-201ENST00000376177 ZNF384Q8TF68 577 aa13.57□□□□□ -0.24
DDX39B-201ENST00000376177 LPIN2Q92539 896 aa13.57□□□□□ -0.24
DDX39B-201ENST00000376177 ATP11BQ9Y2G3 1177 aa13.57□□□□□ -0.24
DDX39B-201ENST00000376177 IL16Q14005 1332 aa13.56□□□□□ -0.24
DDX39B-201ENST00000376177 SALL1Q9NSC2 1324 aa13.56□□□□□ -0.24
DDX39B-201ENST00000376177 TMEM265A0A087WTH1 108 aa13.56□□□□□ -0.24
DDX39B-201ENST00000376177 ADORA1P30542 326 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms