RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 SETDB1Q15047 1291 aa7.09□□□□□ -1.28
PTPN3-202ENST00000374541 KMT5BQ4FZB7 885 aa7.09□□□□□ -1.28
PTPN3-202ENST00000374541 KLHL10Q6JEL2 608 aa7.09□□□□□ -1.28
PTPN3-202ENST00000374541 FNBP4Q8N3X1 1017 aaPredicted RBP7.09□□□□□ -1.28
PTPN3-202ENST00000374541 SLC17A8Q8NDX2 589 aa7.09□□□□□ -1.28
PTPN3-202ENST00000374541 BRIP1Q9BX63 1249 aa7.09□□□□□ -1.28
PTPN3-202ENST00000374541 ADARB2Q9NS39 739 aaKnown RBP7.09□□□□□ -1.28
PTPN3-202ENST00000374541 NSD2O96028 1365 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 CARMIL3Q8ND23 1372 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 FER1L4A9Z1Z3 1794 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 RNF123Q5XPI4 1314 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 MYCLP12524 364 aaPredicted RBP7.08□□□□□ -1.28
PTPN3-202ENST00000374541 ZNF165P49910 485 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 USP14P54578 494 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 KRT83P78385 493 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 FLIIQ13045 1269 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 TTC31Q49AM3 519 aaPredicted RBP7.08□□□□□ -1.28
PTPN3-202ENST00000374541 CATIPQ7Z7H3 387 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 WRNIP1Q96S55 665 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 PARK7Q99497 189 aaKnown RBP7.08□□□□□ -1.28
PTPN3-202ENST00000374541 GAS2L1Q99501 681 aaPredicted RBP7.08□□□□□ -1.28
PTPN3-202ENST00000374541 ELP3Q9H9T3 547 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 FAM114A2Q9NRY5 505 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 SWAP70Q9UH65 585 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 SLC4A4Q9Y6R1 1079 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 AKR1B10O60218 316 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 TAF5LO75529 589 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 CROCCP2Q86T23 111 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 GTF3C6Q969F1 213 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 JAKMIP2Q96AA8 810 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 NARFQ9UHQ1 456 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 FAM135BQ49AJ0 1406 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 CEP170BQ9Y4F5 1589 aaPredicted RBP7.08□□□□□ -1.28
PTPN3-202ENST00000374541 F6X3S4 739 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 PRC1O43663 620 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 ECE2O60344 883 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 BCAR3O75815 825 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 FLOT1O75955 427 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 LACTBP83111 547 aaPredicted RBP7.08□□□□□ -1.28
PTPN3-202ENST00000374541 TUBB2AQ13885 445 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 Q3C1V9 767 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 CCDC50Q8IVM0 306 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 GOLGA1Q92805 767 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 TUBB2BQ9BVA1 445 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 CCDC8Q9H0W5 538 aaPredicted RBP7.08□□□□□ -1.28
PTPN3-202ENST00000374541 FAM184BQ9ULE4 1060 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 LUC7L2Q9Y383 392 aaKnown RBP7.08□□□□□ -1.28
PTPN3-202ENST00000374541 SLU7O95391 586 aaKnown RBP7.08□□□□□ -1.28
PTPN3-202ENST00000374541 NOGQ13253 232 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 FASTKD5Q7L8L6 764 aaKnown RBP7.08□□□□□ -1.28
PTPN3-202ENST00000374541 TTC30AQ86WT1 665 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 ERMNQ8TAM6 284 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 IFT74Q96LB3 600 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 CSRNP1Q96S65 589 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 IL1RAPL2Q9NP60 686 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 GOLGA8AA7E2F4 631 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 GOLGA8BA8MQT2 603 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 BOLA2Q9H3K6 86 aa7.08□□□□□ -1.28
PTPN3-202ENST00000374541 ATP2A2P16615 1042 aaKnown RBP7.07□□□□□ -1.28
PTPN3-202ENST00000374541 MAP7D1Q3KQU3 841 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 DNAJC21Q5F1R6 531 aaKnown RBP7.07□□□□□ -1.28
PTPN3-202ENST00000374541 LDHDQ86WU2 507 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPN3-202ENST00000374541 KIFC2Q96AC6 838 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 TCHPQ9BT92 498 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 PNPLA6Q8IY17 1366 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 DDNO94850 711 aaPredicted RBP7.07□□□□□ -1.28
PTPN3-202ENST00000374541 ATP5DP30049 168 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 MLLT1Q03111 559 aaPredicted RBP7.07□□□□□ -1.28
PTPN3-202ENST00000374541 PDE4DQ08499 809 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 KSR2Q6VAB6 950 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 MIGA2Q7L4E1 593 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 ZNF341Q9BYN7 854 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 MLXIPQ9HAP2 919 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 GGA3Q9NZ52 723 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 NKTRP30414 1462 aaKnown RBP7.07□□□□□ -1.28
PTPN3-202ENST00000374541 CLTCQ00610 1675 aaKnown RBP7.07□□□□□ -1.28
PTPN3-202ENST00000374541 C1orf167Q5SNV9 1468 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 SPDYE3A6NKU9 549 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 SRGAP2BP0DMP2 458 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 ACTN1P12814 892 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 C1QTNF8P60827 252 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 SNAPC2Q13487 334 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 FERMT3Q86UX7 667 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 COL23A1Q86Y22 540 aaPredicted RBP7.07□□□□□ -1.28
PTPN3-202ENST00000374541 CERS3Q8IU89 383 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 SAMD15Q9P1V8 674 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 RSPH14Q9UHP6 348 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 RALGAPBQ86X10 1494 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 CCL15-CCL14A0A0B4J2E2 113 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 CCL15Q16663 113 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 KIAA1841Q6NSI8 718 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 OTUD6BQ8N6M0 293 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 ZNF496Q96IT1 587 aaPredicted RBP7.07□□□□□ -1.28
PTPN3-202ENST00000374541 UBA5Q9GZZ9 404 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 PRAMEF22A3QJZ6 481 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 STX6O43752 255 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 FKTNO75072 461 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 SASH1O94885 1247 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms