RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 KLRG1Q96E93 195 aa22.18■■□□□ 1.14
CDX4-201ENST00000373514 HOOK2Q96ED9 719 aa22.18■■□□□ 1.14
CDX4-201ENST00000373514 HLA-DOAP06340 250 aa22.17■■□□□ 1.14
CDX4-201ENST00000373514 GNAT2P19087 354 aa22.17■■□□□ 1.14
CDX4-201ENST00000373514 INPP5BP32019 993 aa22.17■■□□□ 1.14
CDX4-201ENST00000373514 IREB2P48200 963 aaKnown RBP22.17■■□□□ 1.14
CDX4-201ENST00000373514 CTR9Q6PD62 1173 aa22.17■■□□□ 1.14
CDX4-201ENST00000373514 PAXIP1Q6ZW49 1069 aaPredicted RBP22.17■■□□□ 1.14
CDX4-201ENST00000373514 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.17■■□□□ 1.14
CDX4-201ENST00000373514 PI4KBQ9UBF8 816 aa22.17■■□□□ 1.14
CDX4-201ENST00000373514 PTPRFP10586 1907 aa22.17■■□□□ 1.14
CDX4-201ENST00000373514 RASSF10A6NK89 507 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 PATL2C9JE40 543 aaKnown RBP22.16■■□□□ 1.14
CDX4-201ENST00000373514 USP17L12C9JPN9 530 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 USP17L21D6R901 530 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 TDO2P48775 406 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.16■■□□□ 1.14
CDX4-201ENST00000373514 IFNL3Q8IZI9 196 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 ZKSCAN4Q969J2 545 aaPredicted RBP22.16■■□□□ 1.14
CDX4-201ENST00000373514 MAP3K10Q02779 954 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 GRM1Q13255 1194 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 VGLL4Q14135 290 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 RRP1BQ14684 758 aaKnown RBP22.16■■□□□ 1.14
CDX4-201ENST00000373514 LDLRAD1Q5T700 205 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 CYP4F22Q6NT55 531 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 CRACR2BQ8N4Y2 399 aaPredicted RBP22.16■■□□□ 1.14
CDX4-201ENST00000373514 DYNLL2Q96FJ2 89 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 DDRGK1Q96HY6 314 aa22.16■■□□□ 1.14
CDX4-201ENST00000373514 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.16■■□□□ 1.14
CDX4-201ENST00000373514 ARPP21Q9UBL0 812 aaPredicted RBP22.16■■□□□ 1.14
CDX4-201ENST00000373514 RAD50Q92878 1312 aa22.15■■□□□ 1.14
CDX4-201ENST00000373514 PHF20L1A8MW92 1017 aa22.15■■□□□ 1.14
CDX4-201ENST00000373514 HSPD1P10809 573 aaKnown RBP22.15■■□□□ 1.14
CDX4-201ENST00000373514 C12orf60Q5U649 245 aa22.15■■□□□ 1.14
CDX4-201ENST00000373514 TTC6Q86TZ1 520 aa22.15■■□□□ 1.14
CDX4-201ENST00000373514 SLC44A5Q8NCS7 719 aa22.15■■□□□ 1.14
CDX4-201ENST00000373514 EHD4Q9H223 541 aa22.15■■□□□ 1.14
CDX4-201ENST00000373514 ELP3Q9H9T3 547 aa22.15■■□□□ 1.14
CDX4-201ENST00000373514 GREB1LQ9C091 1923 aaPredicted RBP22.14■■□□□ 1.13
CDX4-201ENST00000373514 TBC1D12O60347 775 aa22.14■■□□□ 1.13
CDX4-201ENST00000373514 SHROOM1Q2M3G4 852 aaPredicted RBP22.14■■□□□ 1.13
CDX4-201ENST00000373514 RGMBQ6NW40 437 aa22.14■■□□□ 1.13
CDX4-201ENST00000373514 METTL16Q86W50 562 aaKnown RBP22.14■■□□□ 1.13
CDX4-201ENST00000373514 RASAL3Q86YV0 1011 aa22.14■■□□□ 1.13
CDX4-201ENST00000373514 STK11IPQ8N1F8 1099 aa22.14■■□□□ 1.13
CDX4-201ENST00000373514 HERC5Q9UII4 1024 aaKnown RBP22.14■■□□□ 1.13
CDX4-201ENST00000373514 SERPINB13Q9UIV8 391 aa22.14■■□□□ 1.13
CDX4-201ENST00000373514 ZNF112Q9UJU3 913 aa22.14■■□□□ 1.13
CDX4-201ENST00000373514 SNCAIPQ9Y6H5 919 aa22.14■■□□□ 1.13
CDX4-201ENST00000373514 DEFB115Q30KQ5 88 aa22.13■■□□□ 1.13
CDX4-201ENST00000373514 GIMAP6Q6P9H5 292 aa22.13■■□□□ 1.13
CDX4-201ENST00000373514 ANKRD13AQ8IZ07 590 aa22.13■■□□□ 1.13
CDX4-201ENST00000373514 CNKSR2Q8WXI2 1034 aa22.13■■□□□ 1.13
CDX4-201ENST00000373514 TRIM34Q9BYJ4 488 aa22.13■■□□□ 1.13
CDX4-201ENST00000373514 BACH2Q9BYV9 841 aa22.13■■□□□ 1.13
CDX4-201ENST00000373514 NAPBQ9H115 298 aa22.13■■□□□ 1.13
CDX4-201ENST00000373514 ROBO3Q96MS0 1386 aa22.13■■□□□ 1.13
CDX4-201ENST00000373514 MINDY4BA8MYZ0 360 aa22.12■■□□□ 1.13
CDX4-201ENST00000373514 SGSM2O43147 1006 aa22.12■■□□□ 1.13
CDX4-201ENST00000373514 CDC45O75419 566 aa22.12■■□□□ 1.13
CDX4-201ENST00000373514 ZNF157P51786 506 aaPredicted RBP22.12■■□□□ 1.13
CDX4-201ENST00000373514 MAP3K9P80192 1104 aa22.12■■□□□ 1.13
CDX4-201ENST00000373514 GABPAQ06546 454 aa22.12■■□□□ 1.13
CDX4-201ENST00000373514 MKRN3Q13064 507 aaKnown RBP22.12■■□□□ 1.13
CDX4-201ENST00000373514 C8orf34Q49A92 452 aa22.12■■□□□ 1.13
CDX4-201ENST00000373514 NACAP1Q9BZK3 213 aa22.12■■□□□ 1.13
CDX4-201ENST00000373514 GDF11O95390 407 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 SHMT1P34896 483 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 MFAP1P55081 439 aaKnown RBP22.11■■□□□ 1.13
CDX4-201ENST00000373514 JAG1P78504 1218 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 SBK1Q52WX2 424 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 FOXP4Q8IVH2 680 aaPredicted RBP22.11■■□□□ 1.13
CDX4-201ENST00000373514 AMOTL1Q8IY63 956 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 RUFY2Q8WXA3 655 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 HHIPL1Q96JK4 782 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 CAPNS2Q96L46 248 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 FAM155AB1AL88 458 aaPredicted RBP22.11■■□□□ 1.13
CDX4-201ENST00000373514 SLC10A3P09131 477 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 VEGFBP49765 207 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 CCDC84Q86UT8 332 aaPredicted RBP22.11■■□□□ 1.13
CDX4-201ENST00000373514 ESYT1Q9BSJ8 1104 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 CSADQ9Y600 493 aa22.11■■□□□ 1.13
CDX4-201ENST00000373514 GJA5P36382 358 aa22.1■■□□□ 1.13
CDX4-201ENST00000373514 PTH1RQ03431 593 aa22.1■■□□□ 1.13
CDX4-201ENST00000373514 PPARAQ07869 468 aa22.1■■□□□ 1.13
CDX4-201ENST00000373514 AOC2O75106 756 aa22.09■■□□□ 1.13
CDX4-201ENST00000373514 FGAP02671 866 aa22.09■■□□□ 1.13
CDX4-201ENST00000373514 CTDSPL2Q05D32 466 aa22.09■■□□□ 1.13
CDX4-201ENST00000373514 NOL9Q5SY16 702 aaKnown RBP22.09■■□□□ 1.13
CDX4-201ENST00000373514 SCYL3Q8IZE3 742 aa22.09■■□□□ 1.13
CDX4-201ENST00000373514 ZIC5Q96T25 663 aa22.09■■□□□ 1.13
CDX4-201ENST00000373514 ZMYM6O95789 1325 aa22.08■■□□□ 1.13
CDX4-201ENST00000373514 CAP2P40123 477 aa22.08■■□□□ 1.13
CDX4-201ENST00000373514 TATDN1Q6P1N9 297 aa22.08■■□□□ 1.13
CDX4-201ENST00000373514 C16orf86Q6ZW13 317 aa22.08■■□□□ 1.13
CDX4-201ENST00000373514 OPTNQ96CV9 577 aa22.08■■□□□ 1.13
CDX4-201ENST00000373514 WNK4Q96J92 1243 aa22.08■■□□□ 1.13
CDX4-201ENST00000373514 TACC3Q9Y6A5 838 aa22.08■■□□□ 1.13
CDX4-201ENST00000373514 WDR33Q9C0J8 1336 aaKnown RBP22.08■■□□□ 1.12
CDX4-201ENST00000373514 MYH4Q9Y623 1939 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms