RNA–Protein interactions for RNA: ENST00000372987.8

CCND3-201, Transcript of cyclin D3, humanhuman

TSL 2 BASIC

Gene CCND3, Length 2,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-201ENST00000372987 HDAC9Q9UKV0 1011 aa17.34■□□□□ 0.37
CCND3-201ENST00000372987 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.34■□□□□ 0.374e-13■□□□□ 9.8
CCND3-201ENST00000372987 RFX7Q2KHR2 1363 aa17.34■□□□□ 0.37
CCND3-201ENST00000372987 SCN4AP35499 1836 aa17.33■□□□□ 0.37
CCND3-201ENST00000372987 ZFYP08048 801 aaPredicted RBP17.33■□□□□ 0.37
CCND3-201ENST00000372987 CYP2D6P10635 497 aa17.33■□□□□ 0.37
CCND3-201ENST00000372987 LMOD1P29536 600 aaPredicted RBP17.33■□□□□ 0.37
CCND3-201ENST00000372987 NKX2-3Q8TAU0 364 aa17.33■□□□□ 0.37
CCND3-201ENST00000372987 ZNF70Q9UC06 446 aaPredicted RBP17.33■□□□□ 0.37
CCND3-201ENST00000372987 CCDC171Q6TFL3 1326 aa17.33■□□□□ 0.36
CCND3-201ENST00000372987 GSG1L2A8MUP6 293 aa17.33■□□□□ 0.36
CCND3-201ENST00000372987 MCCP23508 829 aa17.33■□□□□ 0.36
CCND3-201ENST00000372987 UTP14CQ5TAP6 766 aaKnown RBP17.33■□□□□ 0.36
CCND3-201ENST00000372987 TEX11Q8IYF3 940 aa17.33■□□□□ 0.36
CCND3-201ENST00000372987 RNF214Q8ND24 703 aa17.33■□□□□ 0.36
CCND3-201ENST00000372987 ADARB2Q9NS39 739 aaKnown RBP17.33■□□□□ 0.36
CCND3-201ENST00000372987 SLC4A4Q9Y6R1 1079 aa17.33■□□□□ 0.36
CCND3-201ENST00000372987 HSPD1P10809 573 aaKnown RBP17.32■□□□□ 0.36
CCND3-201ENST00000372987 GTF2F1P35269 517 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCND3-201ENST00000372987 ZSCAN25Q6NSZ9 544 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 SH3BP5LQ7L8J4 393 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 PIBF1Q8WXW3 757 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 TMEM39BQ9GZU3 492 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 FOCADQ5VW36 1801 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 CNTNAP1P78357 1384 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 FLT1P17948 1338 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 FAM196BA6NMK8 535 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 ADM5C9JUS6 153 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 NEK4P51957 841 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 ANAPC15P60006 121 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 GSTO1P78417 241 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 HDLBPQ00341 1268 aaKnown RBP17.32■□□□□ 0.36
CCND3-201ENST00000372987 SPDYE2Q495Y8 402 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 INCENPQ9NQS7 918 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 HELLSQ9NRZ9 838 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 MKRN1Q9UHC7 482 aaKnown RBP17.32■□□□□ 0.36
CCND3-201ENST00000372987 PALD1Q9ULE6 856 aa17.32■□□□□ 0.36
CCND3-201ENST00000372987 DDX60LQ5H9U9 1706 aaKnown RBP17.31■□□□□ 0.36
CCND3-201ENST00000372987 PPP4CP60510 307 aa17.31■□□□□ 0.36
CCND3-201ENST00000372987 LSG1Q9H089 658 aaKnown RBP17.31■□□□□ 0.36
CCND3-201ENST00000372987 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
CCND3-201ENST00000372987 TACC3Q9Y6A5 838 aa17.31■□□□□ 0.36
CCND3-201ENST00000372987 SIPA1L1O43166 1804 aa17.31■□□□□ 0.36
CCND3-201ENST00000372987 DDTLA6NHG4 134 aaPredicted RBP17.31■□□□□ 0.36
CCND3-201ENST00000372987 DNTTIP2Q5QJE6 756 aaKnown RBP17.31■□□□□ 0.36
CCND3-201ENST00000372987 MAP1SQ66K74 1059 aaPredicted RBP17.31■□□□□ 0.36
CCND3-201ENST00000372987 MTMR14Q8NCE2 650 aa17.31■□□□□ 0.36
CCND3-201ENST00000372987 DCP1AQ9NPI6 582 aaPredicted RBP17.31■□□□□ 0.36
CCND3-201ENST00000372987 NAV1Q8NEY1 1877 aa17.3■□□□□ 0.36
CCND3-201ENST00000372987 YY1P25490 414 aa17.3■□□□□ 0.36
CCND3-201ENST00000372987 HAND2P61296 217 aa17.3■□□□□ 0.36
CCND3-201ENST00000372987 APPP05067 770 aa17.29■□□□□ 0.36
CCND3-201ENST00000372987 LDHCP07864 332 aa17.29■□□□□ 0.36
CCND3-201ENST00000372987 MRIQ9BWK5 157 aa17.29■□□□□ 0.36
CCND3-201ENST00000372987 PLCD1P51178 756 aa17.29■□□□□ 0.36
CCND3-201ENST00000372987 GLIS2Q9BZE0 524 aaPredicted RBP17.29■□□□□ 0.36
CCND3-201ENST00000372987 MYH1P12882 1939 aa17.28■□□□□ 0.36
CCND3-201ENST00000372987 TRAF5O00463 557 aa17.28■□□□□ 0.36
CCND3-201ENST00000372987 LETM1O95202 739 aaPredicted RBP17.28■□□□□ 0.36
CCND3-201ENST00000372987 BAG3O95817 575 aa17.28■□□□□ 0.36
CCND3-201ENST00000372987 FGAP02671 866 aa17.28■□□□□ 0.36
CCND3-201ENST00000372987 VEGFAP15692 232 aaPredicted RBP17.28■□□□□ 0.36
CCND3-201ENST00000372987 SHROOM1Q2M3G4 852 aaPredicted RBP17.28■□□□□ 0.36
CCND3-201ENST00000372987 ZNF784Q8NCA9 323 aaPredicted RBP17.28■□□□□ 0.36
CCND3-201ENST00000372987 IL17RAQ96F46 866 aa17.28■□□□□ 0.36
CCND3-201ENST00000372987 NBPF3Q9H094 633 aa17.28■□□□□ 0.36
CCND3-201ENST00000372987 USP5P45974 858 aa17.28■□□□□ 0.36
CCND3-201ENST00000372987 DMTNQ08495 405 aa17.28■□□□□ 0.36
CCND3-201ENST00000372987 SLF2Q8IX21 1173 aa17.28■□□□□ 0.36
CCND3-201ENST00000372987 IFNL3Q8IZI9 196 aa17.28■□□□□ 0.36
CCND3-201ENST00000372987 SLC44A5Q8NCS7 719 aa17.28■□□□□ 0.36
CCND3-201ENST00000372987 GPBP1L1Q9HC44 474 aaPredicted RBP17.28■□□□□ 0.36
CCND3-201ENST00000372987 HIP1O00291 1037 aa17.27■□□□□ 0.36
CCND3-201ENST00000372987 KIF3CO14782 793 aa17.27■□□□□ 0.36
CCND3-201ENST00000372987 RASA3Q14644 834 aa17.27■□□□□ 0.36
CCND3-201ENST00000372987 NOLC1Q14978 699 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCND3-201ENST00000372987 CHAMP1Q96JM3 812 aa17.27■□□□□ 0.36
CCND3-201ENST00000372987 MCM9Q9NXL9 1143 aa17.27■□□□□ 0.36
CCND3-201ENST00000372987 WDR33Q9C0J8 1336 aaKnown RBP17.27■□□□□ 0.36
CCND3-201ENST00000372987 USP17L12C9JPN9 530 aa17.27■□□□□ 0.35
CCND3-201ENST00000372987 USP17L21D6R901 530 aa17.27■□□□□ 0.35
CCND3-201ENST00000372987 FOXD4L5Q5VV16 416 aaPredicted RBP17.27■□□□□ 0.35
CCND3-201ENST00000372987 TMEM87AQ8NBN3 555 aa17.27■□□□□ 0.35
CCND3-201ENST00000372987 FOXD4L4Q8WXT5 416 aaPredicted RBP17.27■□□□□ 0.35
CCND3-201ENST00000372987 DYNLL2Q96FJ2 89 aa17.27■□□□□ 0.35
CCND3-201ENST00000372987 OSBPL5Q9H0X9 879 aaPredicted RBP17.27■□□□□ 0.35
CCND3-201ENST00000372987 RPAP1Q9BWH6 1393 aaPredicted RBP17.26■□□□□ 0.35
CCND3-201ENST00000372987 SSC5DA1L4H1 1573 aa17.26■□□□□ 0.35
CCND3-201ENST00000372987 IQCA1LA6NCM1 817 aa17.26■□□□□ 0.35
CCND3-201ENST00000372987 EPB41L2O43491 1005 aaKnown RBP17.26■□□□□ 0.35
CCND3-201ENST00000372987 CTR9Q6PD62 1173 aa17.26■□□□□ 0.35
CCND3-201ENST00000372987 TEPSINQ96N21 525 aa17.26■□□□□ 0.35
CCND3-201ENST00000372987 NOL10Q9BSC4 688 aaKnown RBP17.26■□□□□ 0.35
CCND3-201ENST00000372987 CRNKL1Q9BZJ0 848 aaKnown RBP17.26■□□□□ 0.35
CCND3-201ENST00000372987 DEFB129Q9H1M3 183 aa17.26■□□□□ 0.35
CCND3-201ENST00000372987 DNAJC18Q9H819 358 aa17.26■□□□□ 0.35
CCND3-201ENST00000372987 PGAP2Q9UHJ9 254 aa17.26■□□□□ 0.35
CCND3-201ENST00000372987 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
CCND3-201ENST00000372987 PATL2C9JE40 543 aaKnown RBP17.25■□□□□ 0.35
CCND3-201ENST00000372987 CTDSPL2Q05D32 466 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms