RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 ZC3H6P61129 1189 aaKnown RBP12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 CACNA2D4Q7Z3S7 1137 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 EGFL6Q8IUX8 553 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 CLIC4Q9Y696 253 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 KIF1BO60333 1816 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 SMIM23A6NLE4 172 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 POLR2DO15514 142 aaKnown RBP12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 CASP14P31944 242 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 RNASE9P60153 205 aaKnown RBP12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 MYSM1Q5VVJ2 828 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 UBLCP1Q8WVY7 318 aaPredicted RBP12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 ZBTB10Q96DT7 871 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 KIF9Q9HAQ2 790 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 SPHKAPQ2M3C7 1700 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 A0A1W2PQ27 194 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 A0A1W2PQ64 194 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 A0A1W2PQD8 194 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 DPF2Q92785 391 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 TSC22D3Q99576 134 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 POLD4Q9HCU8 107 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 TTC21BQ7Z4L5 1316 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 EIF3HO15372 352 aaKnown RBP eCLIP12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 RANBP1P43487 201 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 MTIF2P46199 727 aaKnown RBP12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 MCMDC2Q4G0Z9 681 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 LRRC23Q53EV4 343 aaPredicted RBP12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 CFAP74Q9C0B2 1584 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 MAP3K4Q9Y6R4 1608 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 CMA1P23946 247 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 RWDD2BP57060 319 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 MTF1Q14872 753 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 NBPF14Q5TI25 921 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 SPAG5Q96R06 1193 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 PSMD1Q99460 953 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 TRIM4Q9C037 500 aa12.58□□□□□ -0.4
SYNPO2L-201ENST00000372873 EFCAB6Q5THR3 1501 aa12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 EIF4E1BA6NMX2 242 aaKnown RBP12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 RBL2Q08999 1139 aa12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 WASF1Q92558 559 aa12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 FAM184BQ9ULE4 1060 aa12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 PFKFB2O60825 505 aa12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 MRPS25P82663 173 aaKnown RBP12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 PAK2Q13177 524 aa12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 FAM43BQ6ZT52 329 aaPredicted RBP12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 THEMISQ8N1K5 641 aaPredicted RBP12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 KRI1Q8N9T8 703 aaKnown RBP12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 CCDC43Q96MW1 224 aaKnown RBP12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 IL13P35225 146 aa12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 METAP2P50579 478 aaKnown RBP eCLIP12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 IFT74Q96LB3 600 aa12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 SWAP70Q9UH65 585 aa12.57□□□□□ -0.4
SYNPO2L-201ENST00000372873 CHL1O00533 1208 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 POSTNQ15063 836 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 CCDC38Q502W7 563 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 RUFY4Q6ZNE9 571 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 MAP4K1Q92918 833 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 HAUS4Q9H6D7 363 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 PTCH1Q13635 1447 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 LRRIQ3A6PVS8 624 aaPredicted RBP12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 LUC7L3O95232 432 aaKnown RBP12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 TRIM47Q96LD4 638 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 EPN1Q9Y6I3 576 aaPredicted RBP12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 MARCH6O60337 910 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 NR1D1P20393 614 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 POLE2P56282 527 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 DBN1Q16643 649 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 RSRC2Q7L4I2 434 aaKnown RBP12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 RTEL1Q9NZ71 1219 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 MYO1AQ9UBC5 1043 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 SHROOM2Q13796 1616 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 ZNF213O14771 459 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 HIP1RO75146 1068 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 STAG1Q8WVM7 1258 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 CCDC51Q96ER9 411 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 SLC26A6Q9BXS9 759 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 VCXQ9H320 206 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 VIPAS39Q9H9C1 493 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 TAB2Q9NYJ8 693 aa12.56□□□□□ -0.4
SYNPO2L-201ENST00000372873 A0A0D9SFI3 127 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 GNAT3A8MTJ3 354 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 GIGYF1O75420 1035 aaPredicted RBP12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 TRIM65Q6PJ69 517 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 LINC00301Q8NCQ3 95 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 FAM167BQ9BTA0 163 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 C19orf44Q9H6X5 657 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 SYNRGQ9UMZ2 1314 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 SRGAP2O75044 1071 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 FMR1NBQ8N0W7 255 aaPredicted RBP12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 NOA1Q8NC60 698 aaKnown RBP12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 IL25Q9H293 177 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 ADGRG1Q9Y653 693 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 MLH3Q9UHC1 1453 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 MAP2K7O14733 419 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 C2orf54Q08AI8 447 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 NECTIN1Q15223 517 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 NBPF9Q3BBW0 867 aa12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 TBC1D1Q86TI0 1168 aaPredicted RBP12.55□□□□□ -0.4
SYNPO2L-201ENST00000372873 RNF17Q9BXT8 1623 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms