RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 BCS1LQ9Y276 419 aa30.85■■■□□ 2.53
ATPAF1-202ENST00000371937 CCDC69A6NI79 296 aa30.84■■■□□ 2.53
ATPAF1-202ENST00000371937 PRDM1O75626 825 aa30.84■■■□□ 2.53
ATPAF1-202ENST00000371937 MCM4P33991 863 aa30.84■■■□□ 2.53
ATPAF1-202ENST00000371937 HMGN5P82970 282 aaKnown RBP30.84■■■□□ 2.53
ATPAF1-202ENST00000371937 ZNF287Q9HBT7 754 aa30.84■■■□□ 2.53
ATPAF1-202ENST00000371937 SAP30BPQ9UHR5 308 aaKnown RBP30.84■■■□□ 2.53
ATPAF1-202ENST00000371937 HPS5Q9UPZ3 1129 aa30.84■■■□□ 2.53
ATPAF1-202ENST00000371937 PSME4Q14997 1843 aa30.84■■■□□ 2.53
ATPAF1-202ENST00000371937 APOA5Q6Q788 366 aa30.84■■■□□ 2.53
ATPAF1-202ENST00000371937 SMARCC2Q8TAQ2 1214 aa30.84■■■□□ 2.53
ATPAF1-202ENST00000371937 EVX2Q03828 476 aa30.83■■■□□ 2.53
ATPAF1-202ENST00000371937 CDC42EP5Q6NZY7 148 aa30.83■■■□□ 2.53
ATPAF1-202ENST00000371937 RSBN1LQ6PCB5 846 aaPredicted RBP30.83■■■□□ 2.53
ATPAF1-202ENST00000371937 SYNE3Q6ZMZ3 975 aa30.83■■■□□ 2.53
ATPAF1-202ENST00000371937 NSUN7Q8NE18 718 aaKnown RBP30.83■■■□□ 2.53
ATPAF1-202ENST00000371937 ZKSCAN3Q9BRR0 538 aa30.83■■■□□ 2.53
ATPAF1-202ENST00000371937 NCOA5Q9HCD5 579 aaKnown RBP30.83■■■□□ 2.53
ATPAF1-202ENST00000371937 KIF3AQ9Y496 699 aa30.83■■■□□ 2.53
ATPAF1-202ENST00000371937 SLC12A7Q9Y666 1083 aa30.83■■■□□ 2.53
ATPAF1-202ENST00000371937 FER1L6Q2WGJ9 1857 aa30.83■■■□□ 2.53
ATPAF1-202ENST00000371937 VIL1P09327 827 aaKnown RBP30.82■■■□□ 2.52
ATPAF1-202ENST00000371937 RBM5P52756 815 aaKnown RBP eCLIP30.82■■■□□ 2.52
ATPAF1-202ENST00000371937 LARP1BQ659C4 914 aaKnown RBP30.82■■■□□ 2.52
ATPAF1-202ENST00000371937 ZSCAN10Q96SZ4 725 aaPredicted RBP30.82■■■□□ 2.52
ATPAF1-202ENST00000371937 FOCADQ5VW36 1801 aa30.82■■■□□ 2.52
ATPAF1-202ENST00000371937 ZBTB43O43298 467 aa30.82■■■□□ 2.52
ATPAF1-202ENST00000371937 WDHD1O75717 1129 aaPredicted RBP30.82■■■□□ 2.52
ATPAF1-202ENST00000371937 TNKSO95271 1327 aa30.81■■■□□ 2.52
ATPAF1-202ENST00000371937 PLCD1P51178 756 aa30.81■■■□□ 2.52
ATPAF1-202ENST00000371937 SLC4A8Q2Y0W8 1093 aa30.81■■■□□ 2.52
ATPAF1-202ENST00000371937 MKNK2Q9HBH9 465 aa30.81■■■□□ 2.52
ATPAF1-202ENST00000371937 SENP2Q9HC62 589 aa30.81■■■□□ 2.52
ATPAF1-202ENST00000371937 DDX60LQ5H9U9 1706 aaKnown RBP30.81■■■□□ 2.52
ATPAF1-202ENST00000371937 JAK2O60674 1132 aa30.8■■■□□ 2.52
ATPAF1-202ENST00000371937 RAD17O75943 681 aa30.8■■■□□ 2.52
ATPAF1-202ENST00000371937 METAP2P50579 478 aaKnown RBP eCLIP30.8■■■□□ 2.52
ATPAF1-202ENST00000371937 JDP2Q8WYK2 163 aa30.8■■■□□ 2.52
ATPAF1-202ENST00000371937 COL4A5P29400 1685 aa30.8■■■□□ 2.52
ATPAF1-202ENST00000371937 DDX11L8A8MPP1 907 aa30.8■■■□□ 2.52
ATPAF1-202ENST00000371937 PSMD14O00487 310 aa30.8■■■□□ 2.52
ATPAF1-202ENST00000371937 CPLX1O14810 134 aa30.8■■■□□ 2.52
ATPAF1-202ENST00000371937 CTDNEP1O95476 244 aa30.8■■■□□ 2.52
ATPAF1-202ENST00000371937 ZSCAN22P10073 491 aaPredicted RBP30.8■■■□□ 2.52
ATPAF1-202ENST00000371937 FAM184AQ8NB25 1140 aa30.8■■■□□ 2.52
ATPAF1-202ENST00000371937 GOLGB1Q14789 3259 aaKnown RBP30.79■■■□□ 2.52
ATPAF1-202ENST00000371937 LTBP3Q9NS15 1303 aa30.79■■■□□ 2.52
ATPAF1-202ENST00000371937 PTPDC1A2A3K4 754 aa30.79■■■□□ 2.52
ATPAF1-202ENST00000371937 NFKBIEO00221 500 aa30.79■■■□□ 2.52
ATPAF1-202ENST00000371937 BAG4O95429 457 aaKnown RBP30.79■■■□□ 2.52
ATPAF1-202ENST00000371937 RCAN1P53805 252 aa30.79■■■□□ 2.52
ATPAF1-202ENST00000371937 PICALMQ13492 652 aa30.79■■■□□ 2.52
ATPAF1-202ENST00000371937 SEC23AQ15436 765 aa30.79■■■□□ 2.52
ATPAF1-202ENST00000371937 TTC6Q86TZ1 520 aa30.79■■■□□ 2.52
ATPAF1-202ENST00000371937 DYNLL2Q96FJ2 89 aa30.79■■■□□ 2.52
ATPAF1-202ENST00000371937 TSPY2A6NKD2 308 aa30.78■■■□□ 2.52
ATPAF1-202ENST00000371937 MYH1P12882 1939 aa30.78■■■□□ 2.52
ATPAF1-202ENST00000371937 ADAMTSL1Q8N6G6 1762 aa30.78■■■□□ 2.52
ATPAF1-202ENST00000371937 DTNBO60941 627 aa30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 FOXD4L5Q5VV16 416 aaPredicted RBP30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 C16orf86Q6ZW13 317 aa30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 MICU3Q86XE3 530 aa30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 ENAHQ8N8S7 591 aaPredicted RBP30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 FOXD4L4Q8WXT5 416 aaPredicted RBP30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 HDAC9Q9UKV0 1011 aa30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 GOLGA6L22H0YM25 854 aa30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 CPLX2Q6PUV4 134 aaKnown RBP30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 ZNF444Q8N0Y2 327 aaPredicted RBP30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 NLGN2Q8NFZ4 835 aa30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 DDX11Q96FC9 970 aa30.77■■■□□ 2.52
ATPAF1-202ENST00000371937 IFIT1BQ5T764 474 aaKnown RBP30.76■■■□□ 2.51
ATPAF1-202ENST00000371937 GMLQ99445 158 aa30.76■■■□□ 2.51
ATPAF1-202ENST00000371937 DDX4Q9NQI0 724 aaKnown RBP30.76■■■□□ 2.51
ATPAF1-202ENST00000371937 MTMR6Q9Y217 621 aa30.76■■■□□ 2.51
ATPAF1-202ENST00000371937 GOLGA8AA7E2F4 631 aa30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 CDKL5O76039 1030 aa30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 CCDC178Q5BJE1 867 aa30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 FAM47AQ5JRC9 791 aa30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 RAB11FIP4Q86YS3 637 aa30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 OGFOD1Q8N543 542 aa30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 AGBL3Q8NEM8 1001 aa30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 OSBPL5Q9H0X9 879 aaPredicted RBP30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 NID2Q14112 1375 aa30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 PTMSP20962 102 aa30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 CFAP100Q494V2 611 aa30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 ATP6V1DQ9Y5K8 247 aa30.75■■■□□ 2.51
ATPAF1-202ENST00000371937 VPS37CA5D8V6 355 aaPredicted RBP30.74■■■□□ 2.51
ATPAF1-202ENST00000371937 NPM3O75607 178 aaKnown RBP30.74■■■□□ 2.51
ATPAF1-202ENST00000371937 CDK8P49336 464 aa30.74■■■□□ 2.51
ATPAF1-202ENST00000371937 TFAP4Q01664 338 aa30.74■■■□□ 2.51
ATPAF1-202ENST00000371937 IDI2Q9BXS1 227 aa30.74■■■□□ 2.51
ATPAF1-202ENST00000371937 ECM29Q5VYK3 1845 aa30.74■■■□□ 2.51
ATPAF1-202ENST00000371937 ZNF654Q8IZM8 581 aa30.73■■■□□ 2.51
ATPAF1-202ENST00000371937 F13A1P00488 732 aa30.73■■■□□ 2.51
ATPAF1-202ENST00000371937 CXCL9Q07325 125 aa30.73■■■□□ 2.51
ATPAF1-202ENST00000371937 PPP2R5BQ15173 497 aa30.73■■■□□ 2.51
ATPAF1-202ENST00000371937 ARFGEF1Q9Y6D6 1849 aa30.72■■■□□ 2.51
ATPAF1-202ENST00000371937 CCDC196A0A1B0GTZ2 297 aa30.72■■■□□ 2.51
ATPAF1-202ENST00000371937 TSPY3P0CV98 308 aa30.72■■■□□ 2.51
ATPAF1-202ENST00000371937 TSPY8P0CW00 308 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms