RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 ISCA1Q9BUE6 129 aa12.41□□□□□ -0.42
TWNK-202ENST00000370228 ORC3Q9UBD5 711 aaPredicted RBP12.41□□□□□ -0.42
TWNK-202ENST00000370228 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.41□□□□□ -0.42
TWNK-202ENST00000370228 USP27XA6NNY8 438 aa12.41□□□□□ -0.42
TWNK-202ENST00000370228 PDIA5Q14554 519 aa12.41□□□□□ -0.42
TWNK-202ENST00000370228 TPTE2Q6XPS3 522 aa12.41□□□□□ -0.42
TWNK-202ENST00000370228 MYLK4Q86YV6 388 aaPredicted RBP12.41□□□□□ -0.42
TWNK-202ENST00000370228 C3orf20Q8ND61 904 aa12.41□□□□□ -0.42
TWNK-202ENST00000370228 ODF2LQ9ULJ1 636 aa12.41□□□□□ -0.42
TWNK-202ENST00000370228 SH3TC1Q8TE82 1336 aa12.41□□□□□ -0.42
TWNK-202ENST00000370228 TAF1LQ8IZX4 1826 aa12.41□□□□□ -0.42
TWNK-202ENST00000370228 ERVV-1B6SEH8 477 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 H3BQF6 201 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 POLRMTO00411 1230 aaKnown RBP12.4□□□□□ -0.42
TWNK-202ENST00000370228 EXOC8Q8IYI6 725 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 NLGN1Q8N2Q7 840 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 SDR16C5Q8N3Y7 309 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 ZKSCAN4Q969J2 545 aaPredicted RBP12.4□□□□□ -0.42
TWNK-202ENST00000370228 NUB1Q9Y5A7 615 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 NTSR2O95665 410 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 LIG3P49916 1009 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 GDPD2Q9HCC8 539 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 GADD45BO75293 160 aaPredicted RBP12.4□□□□□ -0.42
TWNK-202ENST00000370228 GNAI2P04899 355 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 PDE1AP54750 535 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 NAP1L1P55209 391 aaKnown RBP12.4□□□□□ -0.42
TWNK-202ENST00000370228 TSHZ3Q63HK5 1081 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 PICK1Q9NRD5 415 aa12.4□□□□□ -0.42
TWNK-202ENST00000370228 CCDC93Q567U6 631 aa12.39□□□□□ -0.43
TWNK-202ENST00000370228 RBM12BQ8IXT5 1001 aaKnown RBP12.39□□□□□ -0.43
TWNK-202ENST00000370228 ZBTB38Q8NAP3 1195 aaPredicted RBP12.39□□□□□ -0.43
TWNK-202ENST00000370228 DDX11Q96FC9 970 aa12.39□□□□□ -0.43
TWNK-202ENST00000370228 FUCA2Q9BTY2 467 aa12.39□□□□□ -0.43
TWNK-202ENST00000370228 PUS3Q9BZE2 481 aaKnown RBP12.39□□□□□ -0.43
TWNK-202ENST00000370228 IL1RAPL2Q9NP60 686 aa12.39□□□□□ -0.43
TWNK-202ENST00000370228 NRBP1Q9UHY1 535 aa12.39□□□□□ -0.43
TWNK-202ENST00000370228 CEP350Q5VT06 3117 aa12.39□□□□□ -0.43
TWNK-202ENST00000370228 RBM47A0AV96 593 aaKnown RBP12.39□□□□□ -0.43
TWNK-202ENST00000370228 ADRA2BP18089 450 aa12.39□□□□□ -0.43
TWNK-202ENST00000370228 PLEKHG4BQ96PX9 1271 aa12.39□□□□□ -0.43
TWNK-202ENST00000370228 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
TWNK-202ENST00000370228 PPFIA4O75335 1185 aa12.38□□□□□ -0.43
TWNK-202ENST00000370228 RDXP35241 583 aaKnown RBP12.38□□□□□ -0.43
TWNK-202ENST00000370228 RASA3Q14644 834 aa12.38□□□□□ -0.43
TWNK-202ENST00000370228 GPR101Q96P66 508 aaPredicted RBP12.38□□□□□ -0.43
TWNK-202ENST00000370228 LZTS2Q9BRK4 669 aa12.38□□□□□ -0.43
TWNK-202ENST00000370228 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.38□□□□□ -0.43
TWNK-202ENST00000370228 A0A1B0GUA9 196 aa12.38□□□□□ -0.43
TWNK-202ENST00000370228 PYGBP11216 843 aa12.38□□□□□ -0.43
TWNK-202ENST00000370228 ALDH1B1P30837 517 aa12.38□□□□□ -0.43
TWNK-202ENST00000370228 CC2D1AQ6P1N0 951 aaPredicted RBP12.38□□□□□ -0.43
TWNK-202ENST00000370228 CLEC4GQ6UXB4 293 aa12.38□□□□□ -0.43
TWNK-202ENST00000370228 MRFAP1L1Q96HT8 127 aa12.38□□□□□ -0.43
TWNK-202ENST00000370228 COL5A3P25940 1745 aaPredicted RBP12.38□□□□□ -0.43
TWNK-202ENST00000370228 ZSCAN9O15535 394 aaPredicted RBP12.38□□□□□ -0.43
TWNK-202ENST00000370228 TM4SF1P30408 202 aa12.38□□□□□ -0.43
TWNK-202ENST00000370228 NLGN2Q8NFZ4 835 aa12.38□□□□□ -0.43
TWNK-202ENST00000370228 CACTINQ8WUQ7 758 aaKnown RBP12.38□□□□□ -0.43
TWNK-202ENST00000370228 G3BP2Q9UN86 482 aaKnown RBP12.38□□□□□ -0.43
TWNK-202ENST00000370228 TAF5LO75529 589 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 SURF6O75683 361 aaKnown RBP12.37□□□□□ -0.43
TWNK-202ENST00000370228 BRD1O95696 1058 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 MX1P20591 662 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 IQCA1Q86XH1 822 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 TBC1D5Q92609 795 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 CELF1Q92879 486 aaKnown RBP12.37□□□□□ -0.43
TWNK-202ENST00000370228 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 VPS18Q9P253 973 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 SUN2Q9UH99 717 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 UBR3Q6ZT12 1888 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 WDR33Q9C0J8 1336 aaKnown RBP12.37□□□□□ -0.43
TWNK-202ENST00000370228 CHUKO15111 745 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 NAT1P18440 290 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 ITGA6P23229 1130 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 LRRC24Q50LG9 513 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 WLSQ5T9L3 541 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 CABS1Q96KC9 395 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 ESYT1Q9BSJ8 1104 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 YIPF2Q9BWQ6 316 aa12.37□□□□□ -0.43
TWNK-202ENST00000370228 H7C1W4 665 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 SKAP2O75563 359 aaPredicted RBP12.36□□□□□ -0.43
TWNK-202ENST00000370228 GNAI3P08754 354 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 FLAD1Q8NFF5 587 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
TWNK-202ENST00000370228 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.36□□□□□ -0.433e-10■■■■■ 36.7
TWNK-202ENST00000370228 ALDH1L1O75891 902 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 CCDC178Q5BJE1 867 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 MYSM1Q5VVJ2 828 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 CDCA2Q69YH5 1023 aaPredicted RBP12.36□□□□□ -0.43
TWNK-202ENST00000370228 TTLL11Q8NHH1 800 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 UBXN4Q92575 508 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 NLRP3Q96P20 1036 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 CD248Q9HCU0 757 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 AKAP2Q9Y2D5 859 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 LAMB4A4D0S4 1761 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 CLNS1AP54105 237 aaKnown RBP12.36□□□□□ -0.43
TWNK-202ENST00000370228 FOXO4P98177 505 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 CCDC57Q2TAC2 916 aa12.36□□□□□ -0.43
TWNK-202ENST00000370228 FUT8Q9BYC5 575 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms